| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is 218532585
Identifier: 218532585
GI number: 218532585
Start: 4980066
End: 4981607
Strand: Reverse
Name: 218532585
Synonym: Mchl_4699
Alternate gene names: NA
Gene position: 4981607-4980066 (Counterclockwise)
Preceding gene: 218532586
Following gene: 218532582
Centisome position: 86.22
GC content: 72.5
Gene sequence:
>1542_bases ATGGAACGCGGGGTGGGTCCAGGATCGTCCGAGAGCTGGCTGCGGCCCGGGCTCACCTGCTGGCGGCAGGAGAGGGCAGG GCGCATCGCGGTGCTGCATGACGGCGCGGCCTATTTCGCCGCCGCCCATGCGGCGCTGCTGAAGGCGCGCACATCCATCA CCCTGATCGGCTGGAGCTTCGATCCGCGCGCGCGCCTGCTGCCGGGGGATTCCCCCGATGCGGGCGAGACCCTGGCGGAA CTGCTGCGCCGCCTGAAGGCCGCGCGGCCGGAACTCGCCATCCGCATCCTGATCTGGGACATGCCCTGGCCGATCTCGGC GGGCAACGACCATACCCCCGACAGCGTACGGGAGAGCCTCGGGCCCGAGATCGACTTCCGCATCGACGGCACGCTGCCCC TCGGCGCCTGCCAGCACCAGAAGATCCTCGTGATCGACGATGCGATCGCCTTCAGCGGCGGCAGCGACTTCGAGGTGAAC CGCTGGGACACCCCCGCCCACCGCGACCGCGATCCCCGCCGCCGCCTGCCCTCCGGCGAGGACTATCCGCCGCGCCACGA CGTGATGATGCTGGTCGATCGTGACGCCGCGCGGGCGCTGGCGGATCTGGCCCGCGAGCGCTGGCGCCGCGCCACCGGCG AGAGCCTTCCGTCTGCCGACGGTGATCCGGACGGGGACCCGGACTTGGATCCTTGGCCCGAATCCCTCGCGCCGCACCTG ACCGACGTGACGGTGGGGCTCGCCCGCACCGATCCACCGCTGGCTGGGCGCCCGGCGGTGACCGAGAGCGCCGCGCTCTA TCGCGCCTCGATCCGCGCGGCGGAGCGCTTCATCTATCTGGAGAACCAGTATCTCACCTCGCCGGTCGTCGCGGAGGCGC TGGCCGAGCGCCTCGCCGAACCCGACGGGCCGGAGATCGTGATCGTGCTGTCCGAGCGCAGCCCGAGCGGCTTCGACCGT CTGACCATGGACAGCGCCCGCCGTGGCCTGATCCGGGCTTTGCGCCGCGCGGACCGGTTCGACCGGCTGCGGATCGTGGC GCCGCACACGGAGAAGGGCCGGCCGATCCTGGTCCACGCCAAGGTCGCGATCATCGACGAGCGCCTGCTGCGGATCGGCT CGACCAACCTCAACAACCGCTCCCTCGGCTACGACACCGAGTGCGACCTCGCCGTGGAGGTGCCGGCCGACGACGCCGAG GCCCGCGCGGCTTTGCGGCGGCTGCTCGTCCGGCTGCTCTCCCATCACGGCGGCTGCCCGCCCGACGTGTTCGGGCAAGC CTTCGCGGCGCGCGGCTCCCTGCGGGCGGTGCTCGACGATCCCCGCTTGATGCCGTGCTCGCGGGTCTGCCCCCTCGTCC CCTCCCGCCGCGGCCCGGTGGCCCGCCTCGTCGAGGCTTTCCATCTTGGCGACCCGGTGAGCCCCGCCGACGCGTGGCGT CCCTGGCGCCGCCGCAAGGCGCTGCGCCGGGTTGGCGGCTCAGGTTTCTTGGAGGAGGACACCGCCTCACAACCGGAGAA GGCGGCACTGGGCGCCTCATGA
Upstream 100 bases:
>100_bases GGCAAACTCAAGCTGGGAAAGGCCGGGGCACGATGAGCGTTCCGCTCGAACAGGGGATGAGCCTGCCGTCGCGGCGCGGC GGCTCGGTGCGCGCATGAGG
Downstream 100 bases:
>100_bases ACCCTCCACCGTGACGGTTGGACGGTTAGATTTTACCCGGCTCCCCTCTCCCCGCACAGCGGGGAGAGGGGATGCGCGCG AAGTCGAGGCGGTCCCAGAG
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: Phospholipase D; SNARE Associated Golgi Protein; Phospholipase D Family Protein; SNARE Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Related Protein; Phospholipase D Domain Protein; Transmembrane Phospholipase Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase/Transphosphatidylase; Phospholipase D Alpha; Phospholipase Protein; Phospholipase D Active Site Motif Domain Protein; Phospholipase; Phospholipase D Protein; Phospholipase/Phosphatidylserine Synthase
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MERGVGPGSSESWLRPGLTCWRQERAGRIAVLHDGAAYFAAAHAALLKARTSITLIGWSFDPRARLLPGDSPDAGETLAE LLRRLKAARPELAIRILIWDMPWPISAGNDHTPDSVRESLGPEIDFRIDGTLPLGACQHQKILVIDDAIAFSGGSDFEVN RWDTPAHRDRDPRRRLPSGEDYPPRHDVMMLVDRDAARALADLARERWRRATGESLPSADGDPDGDPDLDPWPESLAPHL TDVTVGLARTDPPLAGRPAVTESAALYRASIRAAERFIYLENQYLTSPVVAEALAERLAEPDGPEIVIVLSERSPSGFDR LTMDSARRGLIRALRRADRFDRLRIVAPHTEKGRPILVHAKVAIIDERLLRIGSTNLNNRSLGYDTECDLAVEVPADDAE ARAALRRLLVRLLSHHGGCPPDVFGQAFAARGSLRAVLDDPRLMPCSRVCPLVPSRRGPVARLVEAFHLGDPVSPADAWR PWRRRKALRRVGGSGFLEEDTASQPEKAALGAS
Sequences:
>Translated_513_residues MERGVGPGSSESWLRPGLTCWRQERAGRIAVLHDGAAYFAAAHAALLKARTSITLIGWSFDPRARLLPGDSPDAGETLAE LLRRLKAARPELAIRILIWDMPWPISAGNDHTPDSVRESLGPEIDFRIDGTLPLGACQHQKILVIDDAIAFSGGSDFEVN RWDTPAHRDRDPRRRLPSGEDYPPRHDVMMLVDRDAARALADLARERWRRATGESLPSADGDPDGDPDLDPWPESLAPHL TDVTVGLARTDPPLAGRPAVTESAALYRASIRAAERFIYLENQYLTSPVVAEALAERLAEPDGPEIVIVLSERSPSGFDR LTMDSARRGLIRALRRADRFDRLRIVAPHTEKGRPILVHAKVAIIDERLLRIGSTNLNNRSLGYDTECDLAVEVPADDAE ARAALRRLLVRLLSHHGGCPPDVFGQAFAARGSLRAVLDDPRLMPCSRVCPLVPSRRGPVARLVEAFHLGDPVSPADAWR PWRRRKALRRVGGSGFLEEDTASQPEKAALGAS >Mature_513_residues MERGVGPGSSESWLRPGLTCWRQERAGRIAVLHDGAAYFAAAHAALLKARTSITLIGWSFDPRARLLPGDSPDAGETLAE LLRRLKAARPELAIRILIWDMPWPISAGNDHTPDSVRESLGPEIDFRIDGTLPLGACQHQKILVIDDAIAFSGGSDFEVN RWDTPAHRDRDPRRRLPSGEDYPPRHDVMMLVDRDAARALADLARERWRRATGESLPSADGDPDGDPDLDPWPESLAPHL TDVTVGLARTDPPLAGRPAVTESAALYRASIRAAERFIYLENQYLTSPVVAEALAERLAEPDGPEIVIVLSERSPSGFDR LTMDSARRGLIRALRRADRFDRLRIVAPHTEKGRPILVHAKVAIIDERLLRIGSTNLNNRSLGYDTECDLAVEVPADDAE ARAALRRLLVRLLSHHGGCPPDVFGQAFAARGSLRAVLDDPRLMPCSRVCPLVPSRRGPVARLVEAFHLGDPVSPADAWR PWRRRKALRRVGGSGFLEEDTASQPEKAALGAS
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56375; Mature: 56375
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERGVGPGSSESWLRPGLTCWRQERAGRIAVLHDGAAYFAAAHAALLKARTSITLIGWSF CCCCCCCCCCCHHHCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECC DPRARLLPGDSPDAGETLAELLRRLKAARPELAIRILIWDMPWPISAGNDHTPDSVRESL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH GPEIDFRIDGTLPLGACQHQKILVIDDAIAFSGGSDFEVNRWDTPAHRDRDPRRRLPSGE CCCEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC DYPPRHDVMMLVDRDAARALADLARERWRRATGESLPSADGDPDGDPDLDPWPESLAPHL CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCH TDVTVGLARTDPPLAGRPAVTESAALYRASIRAAERFIYLENQYLTSPVVAEALAERLAE HHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCC PDGPEIVIVLSERSPSGFDRLTMDSARRGLIRALRRADRFDRLRIVAPHTEKGRPILVHA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCEEEECCCCCCCCEEEEEE KVAIIDERLLRIGSTNLNNRSLGYDTECDLAVEVPADDAEARAALRRLLVRLLSHHGGCP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC PDVFGQAFAARGSLRAVLDDPRLMPCSRVCPLVPSRRGPVARLVEAFHLGDPVSPADAWR HHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH PWRRRKALRRVGGSGFLEEDTASQPEKAALGAS HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MERGVGPGSSESWLRPGLTCWRQERAGRIAVLHDGAAYFAAAHAALLKARTSITLIGWSF CCCCCCCCCCCHHHCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEEECC DPRARLLPGDSPDAGETLAELLRRLKAARPELAIRILIWDMPWPISAGNDHTPDSVRESL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHH GPEIDFRIDGTLPLGACQHQKILVIDDAIAFSGGSDFEVNRWDTPAHRDRDPRRRLPSGE CCCEEEEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCC DYPPRHDVMMLVDRDAARALADLARERWRRATGESLPSADGDPDGDPDLDPWPESLAPHL CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCH TDVTVGLARTDPPLAGRPAVTESAALYRASIRAAERFIYLENQYLTSPVVAEALAERLAE HHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHCC PDGPEIVIVLSERSPSGFDRLTMDSARRGLIRALRRADRFDRLRIVAPHTEKGRPILVHA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHCCEEEECCCCCCCCEEEEEE KVAIIDERLLRIGSTNLNNRSLGYDTECDLAVEVPADDAEARAALRRLLVRLLSHHGGCP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC PDVFGQAFAARGSLRAVLDDPRLMPCSRVCPLVPSRRGPVARLVEAFHLGDPVSPADAWR HHHHHHHHHHCCCCEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHH PWRRRKALRRVGGSGFLEEDTASQPEKAALGAS HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA