Click here to switch to the map view.

The map label for this gene is 218532522

Identifier: 218532522

GI number: 218532522

Start: 4916684

End: 4917400

Strand: Reverse

Name: 218532522

Synonym: Mchl_4636

Alternate gene names: NA

Gene position: 4917400-4916684 (Counterclockwise)

Preceding gene: 218532528

Following gene: 218532519

Centisome position: 85.11

GC content: 69.46

Gene sequence:

>717_bases
ATGGCCGATATAGCGGAGCGCCCCTACGTCCTGTGCCACATGACCACCTCGGTCGATGGGCGCATCAAGGTCCGGCGCTG
GACCACCATCGACGCGGATTCGCACTACGAGGAGGTCCACAAGCAACTGAAGGGCGATGCCTGGATGTGCGGTCGCATCA
CCATGCAGGGCTATGCCGACAGCGCCAAGCCGCTCGCCTCCGTTCCGCCCGAGGAGCCCGTCTCCCGCGAGGATCACGTC
GCCCGCACCGATGCATCCGGCTACGCGGTGGCGCTCGATGCCCGCGGCGCGATGGATTGGGGCGCACGCAACGACATCGA
GGGCGATCACGTCATCGTGCTGACGACGGGGCAGGCCTCGGACGACCGCCTGCGCCGCCTGAAGGCCGGCGGCCAGTCCT
ACATCATCGCCGGCGAGCGCGAGGTCGATTTCGCTCTCGCGCTGGCCAAGCTCAAGCGCCTGTTCGGCATCGAGCGGCTG
CTGGTCGAGGGCGGCGGGCGCATCAACGGCTCGATGCTGAAGGCCGGGCTCGTGGATGAACTCAGCCTGCTGCTCGCGCC
CGCCGTCGACGGAGTGCTCGGCACGCCGGCCCTGTTCGACTTCGAGGGCGGGGAGGGGGATTCCATGGGCTCGCGCCGCC
GCCTCACCCGCACCGCCTGCGCGCCGTTCGACGACGGCACCGTCTGGCTGCGCTACCGGATCGAAGCCGTCGGCTGA

Upstream 100 bases:

>100_bases
CGGCCAAGCCGGCGGCGCGTCGCCGCGGCAGCGCACCCTGGCCCAGTCAGGCGGCCGGTCTAGTTCCGCCTCCACAATCG
AGAGCAGGAACCCTGACGCC

Downstream 100 bases:

>100_bases
TTCTGCTGAGGGTGGGCGGCGAGGAACGCGTCGTAGGCGTTCGTCACCGCCGCCCGGTTCTCGAAATGCGGGAAGGCACC
CGTCGGCAGCCGCAGGATCG

Product: bifunctional deaminase-reductase domain protein

Products: NA

Alternate protein names: Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase Domain Protein; Pyrimidine Reductase; Riboflavin-Specific Deaminase; Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Protein; Ribd Domain Protein; Pyrimidine Reductase Riboflavin Biosynthesis; 5-Amino-6-(5-Phosphoribosylamino) Uracil Reductase; RibD-Family Protein

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MADIAERPYVLCHMTTSVDGRIKVRRWTTIDADSHYEEVHKQLKGDAWMCGRITMQGYADSAKPLASVPPEEPVSREDHV
ARTDASGYAVALDARGAMDWGARNDIEGDHVIVLTTGQASDDRLRRLKAGGQSYIIAGEREVDFALALAKLKRLFGIERL
LVEGGGRINGSMLKAGLVDELSLLLAPAVDGVLGTPALFDFEGGEGDSMGSRRRLTRTACAPFDDGTVWLRYRIEAVG

Sequences:

>Translated_238_residues
MADIAERPYVLCHMTTSVDGRIKVRRWTTIDADSHYEEVHKQLKGDAWMCGRITMQGYADSAKPLASVPPEEPVSREDHV
ARTDASGYAVALDARGAMDWGARNDIEGDHVIVLTTGQASDDRLRRLKAGGQSYIIAGEREVDFALALAKLKRLFGIERL
LVEGGGRINGSMLKAGLVDELSLLLAPAVDGVLGTPALFDFEGGEGDSMGSRRRLTRTACAPFDDGTVWLRYRIEAVG
>Mature_237_residues
ADIAERPYVLCHMTTSVDGRIKVRRWTTIDADSHYEEVHKQLKGDAWMCGRITMQGYADSAKPLASVPPEEPVSREDHVA
RTDASGYAVALDARGAMDWGARNDIEGDHVIVLTTGQASDDRLRRLKAGGQSYIIAGEREVDFALALAKLKRLFGIERLL
VEGGGRINGSMLKAGLVDELSLLLAPAVDGVLGTPALFDFEGGEGDSMGSRRRLTRTACAPFDDGTVWLRYRIEAVG

Specific function: Unknown

COG id: COG1985

COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25918; Mature: 25787

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIAERPYVLCHMTTSVDGRIKVRRWTTIDADSHYEEVHKQLKGDAWMCGRITMQGYAD
CCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCC
SAKPLASVPPEEPVSREDHVARTDASGYAVALDARGAMDWGARNDIEGDHVIVLTTGQAS
CCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
DDRLRRLKAGGQSYIIAGEREVDFALALAKLKRLFGIERLLVEGGGRINGSMLKAGLVDE
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHH
LSLLLAPAVDGVLGTPALFDFEGGEGDSMGSRRRLTRTACAPFDDGTVWLRYRIEAVG
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
ADIAERPYVLCHMTTSVDGRIKVRRWTTIDADSHYEEVHKQLKGDAWMCGRITMQGYAD
CCCCCCCEEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHCCCEEEEEEEEEECCCC
SAKPLASVPPEEPVSREDHVARTDASGYAVALDARGAMDWGARNDIEGDHVIVLTTGQAS
CCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCC
DDRLRRLKAGGQSYIIAGEREVDFALALAKLKRLFGIERLLVEGGGRINGSMLKAGLVDE
HHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHH
LSLLLAPAVDGVLGTPALFDFEGGEGDSMGSRRRLTRTACAPFDDGTVWLRYRIEAVG
HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA