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The map label for this gene is yajC [H]

Identifier: 218532485

GI number: 218532485

Start: 4876391

End: 4876723

Strand: Reverse

Name: yajC [H]

Synonym: Mchl_4599

Alternate gene names: 218532485

Gene position: 4876723-4876391 (Counterclockwise)

Preceding gene: 218532487

Following gene: 218532484

Centisome position: 84.4

GC content: 65.17

Gene sequence:

>333_bases
TTGATCACCCCCGCCTTCGCGCAAGGAGTCGGTGCCGGAAGCGGCGCGGATGTCGCGTTGCAGTTCGTGCCCTTCGTCCT
GATCTTCGTGATCATGTATTTCCTGATCCTGCGCCCGCAGCAGCGCCGGCTCAAGGATCACCAGAACATGGTGAAGAACG
TGCGCCGCGAGGACACCATCGTGACCACGGGCGGCCTCGTCGGCCGCGTCACGAAGGTCGCGGACGACGCCACCGAGATC
GAGGTCGAGATCGCCCCGAACGTGCGCGTGAAGGTGGTCCGCTCGATGATCTCCGAGGTTCGCGTCAAGGGCGCCCCGGT
CAAGGCCTCCTGA

Upstream 100 bases:

>100_bases
AGTCGCTTTCGGCAAGCCGGTTTTGACAAGCCCGTCGTCGCAAGGCACCGGTCCCGCCGGGCCTCACGGGCCGTCTGCCC
TCGATCAGGAGTTTCTCGCG

Downstream 100 bases:

>100_bases
GAGGTCACATGAGGGTGCCGGCGCACAGGCCCGGCACCTTTCGGTAAACTCAGTCGGAACCGGGCGGATGTTGCGCTTCT
CGAGAACCAAGATTTTCGCG

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MITPAFAQGVGAGSGADVALQFVPFVLIFVIMYFLILRPQQRRLKDHQNMVKNVRREDTIVTTGGLVGRVTKVADDATEI
EVEIAPNVRVKVVRSMISEVRVKGAPVKAS

Sequences:

>Translated_110_residues
MITPAFAQGVGAGSGADVALQFVPFVLIFVIMYFLILRPQQRRLKDHQNMVKNVRREDTIVTTGGLVGRVTKVADDATEI
EVEIAPNVRVKVVRSMISEVRVKGAPVKAS
>Mature_110_residues
MITPAFAQGVGAGSGADVALQFVPFVLIFVIMYFLILRPQQRRLKDHQNMVKNVRREDTIVTTGGLVGRVTKVADDATEI
EVEIAPNVRVKVVRSMISEVRVKGAPVKAS

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12033; Mature: 12033

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPAFAQGVGAGSGADVALQFVPFVLIFVIMYFLILRPQQRRLKDHQNMVKNVRREDTI
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCE
VTTGGLVGRVTKVADDATEIEVEIAPNVRVKVVRSMISEVRVKGAPVKAS
EECCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MITPAFAQGVGAGSGADVALQFVPFVLIFVIMYFLILRPQQRRLKDHQNMVKNVRREDTI
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCE
VTTGGLVGRVTKVADDATEIEVEIAPNVRVKVVRSMISEVRVKGAPVKAS
EECCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]