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The map label for this gene is yddQ [H]

Identifier: 218532069

GI number: 218532069

Start: 4386996

End: 4387595

Strand: Reverse

Name: yddQ [H]

Synonym: Mchl_4163

Alternate gene names: 218532069

Gene position: 4387595-4386996 (Counterclockwise)

Preceding gene: 218532070

Following gene: 218532067

Centisome position: 75.94

GC content: 71.5

Gene sequence:

>600_bases
ATGACCGACCTCAAAACGCTTCGCAGCCTGTCCGGCCTGCCGCCGGAGCCCGCTTCCCTGTCGGGCTCAGGCCTGGTGCT
GATCGACCTGCAGAACACCTACCGTGAGGGCGTGATGCGCCTGGAGGGCGTCGAGCCGGCGATCCGCGAGGCGCAGGCGC
TGCTGGAACGGGCGCGCAACGCCGGTATCCCGGTCTTCCATGTGCGCCACGATGCCGGGCCGGGCTCGCCCTACGACCTC
ACCGCCGCCATCGGCCAGATCAGCGACGAGGTCGCCCCGCGGGAGGGGGAGCCCGTCATCACCAAGGCCTATCCGAGCTC
CTTCGTCGGCACCGACCTTCAGGCGCAGTTGGAGGCCGCCGGCGTCAAGGATGTGATCCTGGCTGGCTTCATGACGCATA
TGTGCGTGAATTCGACCGCGCGCAGTGCCTTCAACCTCGGCTTCCGCCCGACCGTGGTGGCCTCGGCCACCGCCACCCGA
GCCCTGCCGGGGCCGGACGGCGCGACCGTACCGGCGGCGGCGGTGCAGGCCGCAAGCCTCGCGGCGCTCGGCGACCTGTT
CGCGGTGGTGGCGCCGGATGCGGCGGCGATCCGGGGGTAG

Upstream 100 bases:

>100_bases
TCGGTGGCCTTCCGCCCGTTGGACCTTTCAGCAGGTTGCGCGGGCGGCCCCACTCGGCTCACATCCCGCCCGGAAACGCA
TCCCACGAGAAGGGCCAGCC

Downstream 100 bases:

>100_bases
GGATATCAGGCCGCGCGGGCGCGAGGCTGCGCGGCCTCGTCCGTCGGCTGCTGCCCGAACACGCGCTGGTAGAGCGCGGC
GGGGCTGTGGCTGCGGCCTT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTDLKTLRSLSGLPPEPASLSGSGLVLIDLQNTYREGVMRLEGVEPAIREAQALLERARNAGIPVFHVRHDAGPGSPYDL
TAAIGQISDEVAPREGEPVITKAYPSSFVGTDLQAQLEAAGVKDVILAGFMTHMCVNSTARSAFNLGFRPTVVASATATR
ALPGPDGATVPAAAVQAASLAALGDLFAVVAPDAAAIRG

Sequences:

>Translated_199_residues
MTDLKTLRSLSGLPPEPASLSGSGLVLIDLQNTYREGVMRLEGVEPAIREAQALLERARNAGIPVFHVRHDAGPGSPYDL
TAAIGQISDEVAPREGEPVITKAYPSSFVGTDLQAQLEAAGVKDVILAGFMTHMCVNSTARSAFNLGFRPTVVASATATR
ALPGPDGATVPAAAVQAASLAALGDLFAVVAPDAAAIRG
>Mature_198_residues
TDLKTLRSLSGLPPEPASLSGSGLVLIDLQNTYREGVMRLEGVEPAIREAQALLERARNAGIPVFHVRHDAGPGSPYDLT
AAIGQISDEVAPREGEPVITKAYPSSFVGTDLQAQLEAAGVKDVILAGFMTHMCVNSTARSAFNLGFRPTVVASATATRA
LPGPDGATVPAAAVQAASLAALGDLFAVVAPDAAAIRG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20455; Mature: 20324

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLKTLRSLSGLPPEPASLSGSGLVLIDLQNTYREGVMRLEGVEPAIREAQALLERARN
CCHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGIPVFHVRHDAGPGSPYDLTAAIGQISDEVAPREGEPVITKAYPSSFVGTDLQAQLEAA
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHC
GVKDVILAGFMTHMCVNSTARSAFNLGFRPTVVASATATRALPGPDGATVPAAAVQAASL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHH
AALGDLFAVVAPDAAAIRG
HHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
TDLKTLRSLSGLPPEPASLSGSGLVLIDLQNTYREGVMRLEGVEPAIREAQALLERARN
CHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AGIPVFHVRHDAGPGSPYDLTAAIGQISDEVAPREGEPVITKAYPSSFVGTDLQAQLEAA
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHC
GVKDVILAGFMTHMCVNSTARSAFNLGFRPTVVASATATRALPGPDGATVPAAAVQAASL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHH
AALGDLFAVVAPDAAAIRG
HHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]