| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is fatA [H]
Identifier: 218531964
GI number: 218531964
Start: 4269852
End: 4272371
Strand: Reverse
Name: fatA [H]
Synonym: Mchl_4052
Alternate gene names: 218531964
Gene position: 4272371-4269852 (Counterclockwise)
Preceding gene: 218531965
Following gene: 218531963
Centisome position: 73.94
GC content: 68.49
Gene sequence:
>2520_bases ATGGCGGGGATCGCGCTGGCCGGCGTGTCGGTCGCGGTGATGGCTCAGGCGGCCGCGCAAGCCGGCGAGGCGAAGCGGCC CCGCGGCCCCACGATCCTGGCAGAAGCGCCGTTGGGGGGCGCTCCCGTCCGGCTCGCCATCCCGAAGGGTTCACTGGAGG CCGGCCTCGTCGCCTTCACCGAGCAGGCCGGGGTCAAGCTGGTCTACCCGACCGAGCTGACGGCACGGCTCGAGACACCG GGGCTCGCGGGCGAGTTCGCCCCGCTCGATGCCCTGACCAAGCTCTTGGACGGCACCGGCCTCACCTATCGTCCGGCCGG CGCCTCGACCATCACCTTGGTCAACCCGCGCTACGTCCAGCTCGGCGCGGCGCCGGCCGGCGCGGTGACCCTCGATGAAC TGCACGTCGAGGGTCAGGCTCAGGCCCGGGGCCGCGCCGCGGCCGCCGGCCTGCCGCCGCCCACCGGGACGGTCGGGCAG CCGCCCGTGCCCTATGCCGGCGGTCAGGTCGGCTCGGGCGCCCGTGTCGGCTTGCTCGGCAACCGCTCCGTCCTGAAGAC GCCCTTCAGCATCACGGGCTACACGGAGAAGCTGATCGCGGATCAGCAGGCGGTGTCGCTCGCCGATGTCGTGCTGAACA ATTCGTCGGTGCGCAACGACGCCCCGCCCTATAGCGAGCGCGATTCCTACTTCATCCGCGGCTTCTCGGTCACCAATCTC GACACCGCCTTCGACGGGCTGTTCTACCTCGCCAACCCGCGCCGCACCTTCACGGAGGGCCTTGAGCGCGTCGAGGTGTT GCTCGGTCCCACGGCGCTTCTGAGCGGCGGCACCGGCCGCGTCGGCGGCACGATCAACCTGATCCCCAAGCGCGCCTACG ACGAGCCGTTCGCCCGGCTCACCACGACCTACATCAGCGACGCGCAGATCTGGACCCATGCCGACCTCGGCCGCCGCTTC GGCGAGTCCAAGGAATGGGGCGTGCGCTTCAACGGCGCCTACCGCACCGGTGCCACGCCGCTCGACAACAACGCGATCGA GGTCGGTGTGGCGGCGCTGGGCCTCGACTACCGCGGCGACCGGTTCCGGGCCTCGCTCGACATGACCCACTCGACCCAGA ACGTCACGGCGCCGACCTCGCTGTTCAATGCGGTCGCGCCCGGTATTCAGATTCCCCGTGCCCCGAACAACCGGACCAAC ACCGCGAATCCGTTCGAGTACAACGACAGCCGCTACGGCATGATCACGGGCCGGGCCGAGTACGACGTCCTGCCTGACAC GACGGTCTACATCGCCGGCGGCGCCAGCCGCTACAACGAAGACTTCCTCACCTCGAACTACCGCGTGACGAGCGTGACCG GGCAGGCGACCAACCTACTCGCGATCCAGCCCCAGGAAATTCAGGGGCTCACCGGCGAGGTGGGCTTGCGCACCCGCTTC AGCACCGGCTTCCTCAATCATCAGGTGAACATCGCGGCCGTCGAGGCGAACAACAAGAACTTCCGCAGCGGCTTCGTCCC GCCCGTCTTCACCCCTTACACGATCAACATCTACAATCCGGTCTACCTGCCAACCGGATCGATTCCGACGATCGGACTTC CCCGCTCCGCCGCGCAGCCGCTCTTCGCCCAGCTTTCCGCGCGCAGCGTGGCGGTGGCCGACACCCTGTCGTTCTTCGGC GACGACCGCTTCCTGCTGACGCTCGGTGGTCGCTATCAGGAGATCGACCAGCAGGGCTTCGCCACCCGTCCGGGGCCGAC GCAGGGGCAGGTGACCTCGAACTATCAGGAGGGCCGCTTCAGCCCCGCCATCACCTTCGTGCTGAGCCCGTTCGAGAACC TGTCCTTCTACGGCAACTACATCGAGTCGCTCGACCCGGTGGCCGCAGCGCCCCTCGCGGCGATCAATGCCAATGTCCTC TTCCCGCCTGCCGTGGGGCGGCAGAAGGAAATCGGCGTCAAGTACGATTTCGGCACCATTGCCGCCACGGCCGCGCTATT CGAGATCGAGCTGCCGAACGCTTTCACCGATCCCGGGACCCGCATCTACTCGGTCAGCGGCCGTCAGCGGAACCGCGGCG TTGAGCTGAACGTGTTCGGCGAGGTCGTCCCGGGCCTGCGGCTGCTCGGCGGCGTCACCTTCATCGACGCGGAACTGGTC AACACGCCGGGAGGACAGTTCAACGGGCGGGCCGCGCCCGGCGTGCCCGACACGGCCTTCAACCTCTACGCCGAGTACGA CCTGCCGCCGTGGCTGGCGCCGGGCCTGACCCTGACCGGACGGGCGATCTACACCAGCAGCATGTTCTACGATCAGGCCA ACACCCAGTCGGTTCCGGACTGGACGCGCTTCGATGCCGGCCTGCGCTACACGACAGAGGGCGTGAACGGAAAGCCCGTC GTGTTCCGCGCCCTCGTCCAGAACCTGCTCGACGACTCGTACTGGGCCTCCGCCGCCCGCGGCTTCCTCGCCGTCGGCGC GCCGCGCACCTTCATCGTCTCCGCCTCCGTCGATTTCTGA
Upstream 100 bases:
>100_bases AACGTCGAGGGCGCGGAGAACGCAGGGCGTGCCGCCCCTCCCGACGGATCGATGGGGCTTTGGTATGGCGTCGCGCGCAC GCAGGTTTTCACAGGGCCGG
Downstream 100 bases:
>100_bases GAGACCGACGCGTCGCTTCCAGCTCCGCCCTGCCCCGACATCGCGAAGGGGTAAGGGCGGGCCGCTCGGTCGCGCACGCC TGGCCCGTCGATCGCCCCAC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 839; Mature: 838
Protein sequence:
>839_residues MAGIALAGVSVAVMAQAAAQAGEAKRPRGPTILAEAPLGGAPVRLAIPKGSLEAGLVAFTEQAGVKLVYPTELTARLETP GLAGEFAPLDALTKLLDGTGLTYRPAGASTITLVNPRYVQLGAAPAGAVTLDELHVEGQAQARGRAAAAGLPPPTGTVGQ PPVPYAGGQVGSGARVGLLGNRSVLKTPFSITGYTEKLIADQQAVSLADVVLNNSSVRNDAPPYSERDSYFIRGFSVTNL DTAFDGLFYLANPRRTFTEGLERVEVLLGPTALLSGGTGRVGGTINLIPKRAYDEPFARLTTTYISDAQIWTHADLGRRF GESKEWGVRFNGAYRTGATPLDNNAIEVGVAALGLDYRGDRFRASLDMTHSTQNVTAPTSLFNAVAPGIQIPRAPNNRTN TANPFEYNDSRYGMITGRAEYDVLPDTTVYIAGGASRYNEDFLTSNYRVTSVTGQATNLLAIQPQEIQGLTGEVGLRTRF STGFLNHQVNIAAVEANNKNFRSGFVPPVFTPYTINIYNPVYLPTGSIPTIGLPRSAAQPLFAQLSARSVAVADTLSFFG DDRFLLTLGGRYQEIDQQGFATRPGPTQGQVTSNYQEGRFSPAITFVLSPFENLSFYGNYIESLDPVAAAPLAAINANVL FPPAVGRQKEIGVKYDFGTIAATAALFEIELPNAFTDPGTRIYSVSGRQRNRGVELNVFGEVVPGLRLLGGVTFIDAELV NTPGGQFNGRAAPGVPDTAFNLYAEYDLPPWLAPGLTLTGRAIYTSSMFYDQANTQSVPDWTRFDAGLRYTTEGVNGKPV VFRALVQNLLDDSYWASAARGFLAVGAPRTFIVSASVDF
Sequences:
>Translated_839_residues MAGIALAGVSVAVMAQAAAQAGEAKRPRGPTILAEAPLGGAPVRLAIPKGSLEAGLVAFTEQAGVKLVYPTELTARLETP GLAGEFAPLDALTKLLDGTGLTYRPAGASTITLVNPRYVQLGAAPAGAVTLDELHVEGQAQARGRAAAAGLPPPTGTVGQ PPVPYAGGQVGSGARVGLLGNRSVLKTPFSITGYTEKLIADQQAVSLADVVLNNSSVRNDAPPYSERDSYFIRGFSVTNL DTAFDGLFYLANPRRTFTEGLERVEVLLGPTALLSGGTGRVGGTINLIPKRAYDEPFARLTTTYISDAQIWTHADLGRRF GESKEWGVRFNGAYRTGATPLDNNAIEVGVAALGLDYRGDRFRASLDMTHSTQNVTAPTSLFNAVAPGIQIPRAPNNRTN TANPFEYNDSRYGMITGRAEYDVLPDTTVYIAGGASRYNEDFLTSNYRVTSVTGQATNLLAIQPQEIQGLTGEVGLRTRF STGFLNHQVNIAAVEANNKNFRSGFVPPVFTPYTINIYNPVYLPTGSIPTIGLPRSAAQPLFAQLSARSVAVADTLSFFG DDRFLLTLGGRYQEIDQQGFATRPGPTQGQVTSNYQEGRFSPAITFVLSPFENLSFYGNYIESLDPVAAAPLAAINANVL FPPAVGRQKEIGVKYDFGTIAATAALFEIELPNAFTDPGTRIYSVSGRQRNRGVELNVFGEVVPGLRLLGGVTFIDAELV NTPGGQFNGRAAPGVPDTAFNLYAEYDLPPWLAPGLTLTGRAIYTSSMFYDQANTQSVPDWTRFDAGLRYTTEGVNGKPV VFRALVQNLLDDSYWASAARGFLAVGAPRTFIVSASVDF >Mature_838_residues AGIALAGVSVAVMAQAAAQAGEAKRPRGPTILAEAPLGGAPVRLAIPKGSLEAGLVAFTEQAGVKLVYPTELTARLETPG LAGEFAPLDALTKLLDGTGLTYRPAGASTITLVNPRYVQLGAAPAGAVTLDELHVEGQAQARGRAAAAGLPPPTGTVGQP PVPYAGGQVGSGARVGLLGNRSVLKTPFSITGYTEKLIADQQAVSLADVVLNNSSVRNDAPPYSERDSYFIRGFSVTNLD TAFDGLFYLANPRRTFTEGLERVEVLLGPTALLSGGTGRVGGTINLIPKRAYDEPFARLTTTYISDAQIWTHADLGRRFG ESKEWGVRFNGAYRTGATPLDNNAIEVGVAALGLDYRGDRFRASLDMTHSTQNVTAPTSLFNAVAPGIQIPRAPNNRTNT ANPFEYNDSRYGMITGRAEYDVLPDTTVYIAGGASRYNEDFLTSNYRVTSVTGQATNLLAIQPQEIQGLTGEVGLRTRFS TGFLNHQVNIAAVEANNKNFRSGFVPPVFTPYTINIYNPVYLPTGSIPTIGLPRSAAQPLFAQLSARSVAVADTLSFFGD DRFLLTLGGRYQEIDQQGFATRPGPTQGQVTSNYQEGRFSPAITFVLSPFENLSFYGNYIESLDPVAAAPLAAINANVLF PPAVGRQKEIGVKYDFGTIAATAALFEIELPNAFTDPGTRIYSVSGRQRNRGVELNVFGEVVPGLRLLGGVTFIDAELVN TPGGQFNGRAAPGVPDTAFNLYAEYDLPPWLAPGLTLTGRAIYTSSMFYDQANTQSVPDWTRFDAGLRYTTEGVNGKPVV FRALVQNLLDDSYWASAARGFLAVGAPRTFIVSASVDF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=398, Percent_Identity=27.3869346733668, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1787024, Length=738, Percent_Identity=25.4742547425474, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 89347; Mature: 89216
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIALAGVSVAVMAQAAAQAGEAKRPRGPTILAEAPLGGAPVRLAIPKGSLEAGLVAFT CCCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEE EQAGVKLVYPTELTARLETPGLAGEFAPLDALTKLLDGTGLTYRPAGASTITLVNPRYVQ CCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCEEEEECCCEEE LGAAPAGAVTLDELHVEGQAQARGRAAAAGLPPPTGTVGQPPVPYAGGQVGSGARVGLLG EECCCCCCEEEEHEEECCCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC NRSVLKTPFSITGYTEKLIADQQAVSLADVVLNNSSVRNDAPPYSERDSYFIRGFSVTNL CCCCEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC DTAFDGLFYLANPRRTFTEGLERVEVLLGPTALLSGGTGRVGGTINLIPKRAYDEPFARL CHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHH TTTYISDAQIWTHADLGRRFGESKEWGVRFNGAYRTGATPLDNNAIEVGVAALGLDYRGD HHHHCCCCEEEEEHHHHHHCCCCCCCCEEECCEEECCCCCCCCCCEEEEEEEEECCCCCC RFRASLDMTHSTQNVTAPTSLFNAVAPGIQIPRAPNNRTNTANPFEYNDSRYGMITGRAE EEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCC YDVLPDTTVYIAGGASRYNEDFLTSNYRVTSVTGQATNLLAIQPQEIQGLTGEVGLRTRF CCCCCCCEEEEECCCCCCCCCHHCCCEEEEEECCCCCEEEEECHHHHCCCCCCCCCEEEE STGFLNHQVNIAAVEANNKNFRSGFVPPVFTPYTINIYNPVYLPTGSIPTIGLPRSAAQP CCCEECCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHCCH LFAQLSARSVAVADTLSFFGDDRFLLTLGGRYQEIDQQGFATRPGPTQGQVTSNYQEGRF HHHHHCCCEEEHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCEECCCCCCCC SPAITFVLSPFENLSFYGNYIESLDPVAAAPLAAINANVLFPPAVGRQKEIGVKYDFGTI CCEEEEEECCCHHHHHHHHHHHHCCCHHHCCHHHCCCCEEECCCCCCCCCCCEEECCHHH AATAALFEIELPNAFTDPGTRIYSVSGRQRNRGVELNVFGEVVPGLRLLGGVTFIDAELV EEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHCHHHHHCCEEEEEEEEE NTPGGQFNGRAAPGVPDTAFNLYAEYDLPPWLAPGLTLTGRAIYTSSMFYDQANTQSVPD CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCC WTRFDAGLRYTTEGVNGKPVVFRALVQNLLDDSYWASAARGFLAVGAPRTFIVSASVDF HHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCEEEECCCEEEEEEEECCC >Mature Secondary Structure AGIALAGVSVAVMAQAAAQAGEAKRPRGPTILAEAPLGGAPVRLAIPKGSLEAGLVAFT CCEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCEEEEE EQAGVKLVYPTELTARLETPGLAGEFAPLDALTKLLDGTGLTYRPAGASTITLVNPRYVQ CCCCEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCEEEEECCCEEE LGAAPAGAVTLDELHVEGQAQARGRAAAAGLPPPTGTVGQPPVPYAGGQVGSGARVGLLG EECCCCCCEEEEHEEECCCHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC NRSVLKTPFSITGYTEKLIADQQAVSLADVVLNNSSVRNDAPPYSERDSYFIRGFSVTNL CCCCEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCC DTAFDGLFYLANPRRTFTEGLERVEVLLGPTALLSGGTGRVGGTINLIPKRAYDEPFARL CHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHH TTTYISDAQIWTHADLGRRFGESKEWGVRFNGAYRTGATPLDNNAIEVGVAALGLDYRGD HHHHCCCCEEEEEHHHHHHCCCCCCCCEEECCEEECCCCCCCCCCEEEEEEEEECCCCCC RFRASLDMTHSTQNVTAPTSLFNAVAPGIQIPRAPNNRTNTANPFEYNDSRYGMITGRAE EEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCC YDVLPDTTVYIAGGASRYNEDFLTSNYRVTSVTGQATNLLAIQPQEIQGLTGEVGLRTRF CCCCCCCEEEEECCCCCCCCCHHCCCEEEEEECCCCCEEEEECHHHHCCCCCCCCCEEEE STGFLNHQVNIAAVEANNKNFRSGFVPPVFTPYTINIYNPVYLPTGSIPTIGLPRSAAQP CCCEECCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHCCH LFAQLSARSVAVADTLSFFGDDRFLLTLGGRYQEIDQQGFATRPGPTQGQVTSNYQEGRF HHHHHCCCEEEHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCEECCCCCCCC SPAITFVLSPFENLSFYGNYIESLDPVAAAPLAAINANVLFPPAVGRQKEIGVKYDFGTI CCEEEEEECCCHHHHHHHHHHHHCCCHHHCCHHHCCCCEEECCCCCCCCCCCEEECCHHH AATAALFEIELPNAFTDPGTRIYSVSGRQRNRGVELNVFGEVVPGLRLLGGVTFIDAELV EEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHHCHHHHHCCEEEEEEEEE NTPGGQFNGRAAPGVPDTAFNLYAEYDLPPWLAPGLTLTGRAIYTSSMFYDQANTQSVPD CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCCC WTRFDAGLRYTTEGVNGKPVVFRALVQNLLDDSYWASAARGFLAVGAPRTFIVSASVDF HHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]