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The map label for this gene is fadF [H]

Identifier: 218531952

GI number: 218531952

Start: 4253061

End: 4254962

Strand: Reverse

Name: fadF [H]

Synonym: Mchl_4040

Alternate gene names: 218531952

Gene position: 4254962-4253061 (Counterclockwise)

Preceding gene: 218531953

Following gene: 218531951

Centisome position: 73.64

GC content: 74.08

Gene sequence:

>1902_bases
ATGACCAGCTTCGTGCCCCTGACCACGGTGTTTCCCGGCCTCGTCTGGCTGATGGCGGCGCTCGCCCTCGTCCAGGGCTT
GCGCCGTGCCGCCCTCTGGCGCGTCGGCGCGGCGGCGCCCGTGGCGTGGCTCGACGGGCTCGCCAAGCTGCCCCGGCGCT
ACCTCGTCGATGTCCACCACGTCGTGGCCCGCGACGCCTACGCCTCGCGCATGCACGCGGTCGTGGCCGGCGGCCTGATC
GCGGCCTCGATCCTGACCGCGCTGGCGATCCTGCCGCCGCTGGCCGATTTCCGGCCCTACTGGTTCCTCGTGGCGCTCGC
CTTCGGCGTGACCGCGATCGGCTCGCTGCTCGTCGGCGCCCGGCGCTACCCGGCCAAGCCGAAGCGCCTCTCTGCCGGCC
GCTTCCAGATCCTGCCGTTCCTCCTCGTCGCCTACGCCGTCGGCGGCACGATCACCGCCCTCATCCTCGCGCTCGGCGGC
GCCGGCGGCGTGTTCGGTTCCGTCGCGCTTGCGCTCGCGGCGGCCGGCGGGCTCGGCCTCGCCTTCGAGGTGCGCCACGG
CCCGATGCGCCACGCGGCGGCCGGCGCGCTCCACCTCGTCGCCCATCCCCGGCCCGGCCGGTTCGAGGGCCGCCCCGACA
CCGCGCTCCAGCCGCTCGACCTCGACGCGCCCCGCCTCGGCTCGGAGATGCCGGCCGACTTCACCTGGAACCGGCTGCTG
TCCTACGACGCCTGCGTGAGCTGCGGGCGCTGTGAGACCGCCTGCCCGGCTTTCGCCGCCGGCCAACCGCTAAATCCGAA
GAAGCTGATACAGGATCTCGTCGCCGGCCTCTCCCCCGCCGAGCCCGCCTATGCCGGCAACCCCTATCCCGGCGGCCGGG
CGGCGGAGGGCGCGCGCGGGGCTTTGGCCCGGCTGGTCGGGCCGGATGCGCGCATCCATCCCGACACGCTGTGGTCCTGC
ACCACCTGCCGCGCTTGCGTCGAGGAATGCCCGATGATGATCGAGCATGTCGATGCCGTGGTCTCCCTGCGCCGTCACGA
GACGCTGGAGCGCGGAGCGCTGCCCGAGAAGGCCGTCGTCCCGGTGACGGAGCTGCGCCAGTCCGGCGATCCCGGCGGGC
GCCCGCTGGCCTCGCGCACCGATTTCGCCGCCGGGCTCGACCTGCCGCGGATCGCGGACCGTGAGCCCGTCGATGTCCTG
CTCTGGCTCGGCGAGGGCGCCTACGATCTGCGCTACGGCCGCTCTTTGCGGGCGCTGATCCGGCTCCTGCGCGAGGCCGA
GGTCGACTTCGCGGTGCTGGGCGCGGAGGAGCGCGACACCGGCGACCTCGCCCGGCGGCTCGGCGACGAGGCGACCTTCC
AGGCGCTGGCGCGGGAGAACATCGCGACGCTGGCGAAGTACCGCTTCAAGCGGATCATCACCGCCGACCCGCACGCGCTG
CATGCCCTGCGCAACGAGTACCCGGCCTTCGGTGGCCACTACACCGTGACCCACCACACCGCCCTCCTGCTGGAGCTGAT
CCGGGCCGGCAAGCTCAATCCGGGCCGTCTGCCCGACCTCTCGGTGACCTATCACGACCCCTGCTACCTCGCCCGCTACA
ACGGGGAGACCGAGGCGCCCCGCGCGGTGCTCGACGCGATCGGCGTCACCCGCCGCGAGATGACCCGGTCCGGGCGCCGG
GCGATGTGCTGCGGCGGCGGCGGCGGCGCGCCGGTGAGCGACGTGCCGGGCGAGCGCCGCATCCCCGACATCCGCATGGC
TCAGGCCGCCGAGACCGGGGCCGGGATCGTCGCCGTCGCCTGCCCCTCCTGCACGGCGATGCTGGAGGGCGTGACCGACC
GCAAGGCGGAGATCCGCGACGTGGCCGAACTCCTGCTCCAGGCGGTGGAGGCGGGCCGATGA

Upstream 100 bases:

>100_bases
ACAGGGTCGTCGCGACCCTCTCCCCGCGTGCGGGGAAAGGGGATGCACGGTCCTCGTAAGCCCCGTCCGGAACTGTCGCA
CAGCCCGTAGGCCCACCGTC

Downstream 100 bases:

>100_bases
GCCGCCCGCGCCGCGACCCGAGGGCCGAGCGGGCGGCTTCCCTCGTCGCCGGCGAGGGCCCGCGTCCGCGCTACGACCGC
ACCCGCCGCGCGACCGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MTSFVPLTTVFPGLVWLMAALALVQGLRRAALWRVGAAAPVAWLDGLAKLPRRYLVDVHHVVARDAYASRMHAVVAGGLI
AASILTALAILPPLADFRPYWFLVALAFGVTAIGSLLVGARRYPAKPKRLSAGRFQILPFLLVAYAVGGTITALILALGG
AGGVFGSVALALAAAGGLGLAFEVRHGPMRHAAAGALHLVAHPRPGRFEGRPDTALQPLDLDAPRLGSEMPADFTWNRLL
SYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAAEGARGALARLVGPDARIHPDTLWSC
TTCRACVEECPMMIEHVDAVVSLRRHETLERGALPEKAVVPVTELRQSGDPGGRPLASRTDFAAGLDLPRIADREPVDVL
LWLGEGAYDLRYGRSLRALIRLLREAEVDFAVLGAEERDTGDLARRLGDEATFQALARENIATLAKYRFKRIITADPHAL
HALRNEYPAFGGHYTVTHHTALLLELIRAGKLNPGRLPDLSVTYHDPCYLARYNGETEAPRAVLDAIGVTRREMTRSGRR
AMCCGGGGGAPVSDVPGERRIPDIRMAQAAETGAGIVAVACPSCTAMLEGVTDRKAEIRDVAELLLQAVEAGR

Sequences:

>Translated_633_residues
MTSFVPLTTVFPGLVWLMAALALVQGLRRAALWRVGAAAPVAWLDGLAKLPRRYLVDVHHVVARDAYASRMHAVVAGGLI
AASILTALAILPPLADFRPYWFLVALAFGVTAIGSLLVGARRYPAKPKRLSAGRFQILPFLLVAYAVGGTITALILALGG
AGGVFGSVALALAAAGGLGLAFEVRHGPMRHAAAGALHLVAHPRPGRFEGRPDTALQPLDLDAPRLGSEMPADFTWNRLL
SYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAAEGARGALARLVGPDARIHPDTLWSC
TTCRACVEECPMMIEHVDAVVSLRRHETLERGALPEKAVVPVTELRQSGDPGGRPLASRTDFAAGLDLPRIADREPVDVL
LWLGEGAYDLRYGRSLRALIRLLREAEVDFAVLGAEERDTGDLARRLGDEATFQALARENIATLAKYRFKRIITADPHAL
HALRNEYPAFGGHYTVTHHTALLLELIRAGKLNPGRLPDLSVTYHDPCYLARYNGETEAPRAVLDAIGVTRREMTRSGRR
AMCCGGGGGAPVSDVPGERRIPDIRMAQAAETGAGIVAVACPSCTAMLEGVTDRKAEIRDVAELLLQAVEAGR
>Mature_632_residues
TSFVPLTTVFPGLVWLMAALALVQGLRRAALWRVGAAAPVAWLDGLAKLPRRYLVDVHHVVARDAYASRMHAVVAGGLIA
ASILTALAILPPLADFRPYWFLVALAFGVTAIGSLLVGARRYPAKPKRLSAGRFQILPFLLVAYAVGGTITALILALGGA
GGVFGSVALALAAAGGLGLAFEVRHGPMRHAAAGALHLVAHPRPGRFEGRPDTALQPLDLDAPRLGSEMPADFTWNRLLS
YDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAAEGARGALARLVGPDARIHPDTLWSCT
TCRACVEECPMMIEHVDAVVSLRRHETLERGALPEKAVVPVTELRQSGDPGGRPLASRTDFAAGLDLPRIADREPVDVLL
WLGEGAYDLRYGRSLRALIRLLREAEVDFAVLGAEERDTGDLARRLGDEATFQALARENIATLAKYRFKRIITADPHALH
ALRNEYPAFGGHYTVTHHTALLLELIRAGKLNPGRLPDLSVTYHDPCYLARYNGETEAPRAVLDAIGVTRREMTRSGRRA
MCCGGGGGAPVSDVPGERRIPDIRMAQAAETGAGIVAVACPSCTAMLEGVTDRKAEIRDVAELLLQAVEAGR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 67471; Mature: 67340

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSFVPLTTVFPGLVWLMAALALVQGLRRAALWRVGAAAPVAWLDGLAKLPRRYLVDVHH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VVARDAYASRMHAVVAGGLIAASILTALAILPPLADFRPYWFLVALAFGVTAIGSLLVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
RRYPAKPKRLSAGRFQILPFLLVAYAVGGTITALILALGGAGGVFGSVALALAAAGGLGL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE
AFEVRHGPMRHAAAGALHLVAHPRPGRFEGRPDTALQPLDLDAPRLGSEMPADFTWNRLL
EEEECCCCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAAEGARG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
ALARLVGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERGALPEKAVV
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PVTELRQSGDPGGRPLASRTDFAAGLDLPRIADREPVDVLLWLGEGAYDLRYGRSLRALI
CHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHCHHHHHHH
RLLREAEVDFAVLGAEERDTGDLARRLGDEATFQALARENIATLAKYRFKRIITADPHAL
HHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HALRNEYPAFGGHYTVTHHTALLLELIRAGKLNPGRLPDLSVTYHDPCYLARYNGETEAP
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCHH
RAVLDAIGVTRREMTRSGRRAMCCGGGGGAPVSDVPGERRIPDIRMAQAAETGAGIVAVA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
CPSCTAMLEGVTDRKAEIRDVAELLLQAVEAGR
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSFVPLTTVFPGLVWLMAALALVQGLRRAALWRVGAAAPVAWLDGLAKLPRRYLVDVHH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VVARDAYASRMHAVVAGGLIAASILTALAILPPLADFRPYWFLVALAFGVTAIGSLLVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHH
RRYPAKPKRLSAGRFQILPFLLVAYAVGGTITALILALGGAGGVFGSVALALAAAGGLGL
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCE
AFEVRHGPMRHAAAGALHLVAHPRPGRFEGRPDTALQPLDLDAPRLGSEMPADFTWNRLL
EEEECCCCHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
SYDACVSCGRCETACPAFAAGQPLNPKKLIQDLVAGLSPAEPAYAGNPYPGGRAAEGARG
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHH
ALARLVGPDARIHPDTLWSCTTCRACVEECPMMIEHVDAVVSLRRHETLERGALPEKAVV
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PVTELRQSGDPGGRPLASRTDFAAGLDLPRIADREPVDVLLWLGEGAYDLRYGRSLRALI
CHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHCHHHHHHH
RLLREAEVDFAVLGAEERDTGDLARRLGDEATFQALARENIATLAKYRFKRIITADPHAL
HHHHHCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
HALRNEYPAFGGHYTVTHHTALLLELIRAGKLNPGRLPDLSVTYHDPCYLARYNGETEAP
HHHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCHH
RAVLDAIGVTRREMTRSGRRAMCCGGGGGAPVSDVPGERRIPDIRMAQAAETGAGIVAVA
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
CPSCTAMLEGVTDRKAEIRDVAELLLQAVEAGR
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]