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The map label for this gene is 218530954

Identifier: 218530954

GI number: 218530954

Start: 3176152

End: 3176823

Strand: Reverse

Name: 218530954

Synonym: Mchl_3004

Alternate gene names: NA

Gene position: 3176823-3176152 (Counterclockwise)

Preceding gene: 218530961

Following gene: 218530950

Centisome position: 54.98

GC content: 69.64

Gene sequence:

>672_bases
ATGAACGAGTGGGTGCACCTCGAAACCAGCGACGTGCCCGGCGGCGGCAAGAGCCTCGCCTTGATGCAGCGCGGCGGTGA
ATTCTCCATCGTCGTCGGCAACATCGAATTGATGAACAGCACGCGTGGCGCCTCGGAGGAGGCGCTGGCCTCGCTGACCT
GCGCCCGGCTGACGGGCCGGCCCGCGCCGCGCATCCTGATCGGCGGCCTCGGCATGGGCTTTACGTTGCGCGCCGCTTTG
CGGGAGCTGGGACCGGACGCGCGCATCGTCGTCGCCGAACTTGTGCCGGCGGTGGCCGCCTGGGCACGGGGACCGCTCGC
TTCCATCTTCGCCGGCTGCCTCGACGATCCGCGCGTCGAGCTGTGCGAGACGGACGTGACCCGCCTGATCCAGTCCGAGG
CCGCCGGGTGGGATGCGATCCTCTTGGATGTGGATAACGGCCCGGAGGGTCTGCTGCGGCGCGCCAACAACCGGCTTTAC
GACGAGTGGGGCCTGAAGCGGGCGCAATGGGCGCTGAAGCCCGGCGGCACGCTCGGGGTCTGGTCGGGGACGCCGGACCG
AAAGTTCAAGGCGCGGCTTCAGCGGCTTGGTTTCACCGTCGAGGAGGTTCGCCGGCCGGCCAGCGGTTCGAGCGGTCCCC
GCCATGTCATCTGGCTCGCAACGCAGCCCTGA

Upstream 100 bases:

>100_bases
GCGTTTAGACATGCCCGCTGATAGGCGGCCTTCAGCGGAAAGAGCAATGGCGACGGACGCATGCGGGGTCGCACCCGGCG
CCCGGCCGGGAAAGGCAGCG

Downstream 100 bases:

>100_bases
CCTTCGGTGCGCTGTTGGCGCGGAACGGCCGGGACACGCGCTTCAGCCCGCCTCGCTGCGAGCGTGTCCCACCTGTTCGA
TTTCGCACGGATGCTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNEWVHLETSDVPGGGKSLALMQRGGEFSIVVGNIELMNSTRGASEEALASLTCARLTGRPAPRILIGGLGMGFTLRAAL
RELGPDARIVVAELVPAVAAWARGPLASIFAGCLDDPRVELCETDVTRLIQSEAAGWDAILLDVDNGPEGLLRRANNRLY
DEWGLKRAQWALKPGGTLGVWSGTPDRKFKARLQRLGFTVEEVRRPASGSSGPRHVIWLATQP

Sequences:

>Translated_223_residues
MNEWVHLETSDVPGGGKSLALMQRGGEFSIVVGNIELMNSTRGASEEALASLTCARLTGRPAPRILIGGLGMGFTLRAAL
RELGPDARIVVAELVPAVAAWARGPLASIFAGCLDDPRVELCETDVTRLIQSEAAGWDAILLDVDNGPEGLLRRANNRLY
DEWGLKRAQWALKPGGTLGVWSGTPDRKFKARLQRLGFTVEEVRRPASGSSGPRHVIWLATQP
>Mature_223_residues
MNEWVHLETSDVPGGGKSLALMQRGGEFSIVVGNIELMNSTRGASEEALASLTCARLTGRPAPRILIGGLGMGFTLRAAL
RELGPDARIVVAELVPAVAAWARGPLASIFAGCLDDPRVELCETDVTRLIQSEAAGWDAILLDVDNGPEGLLRRANNRLY
DEWGLKRAQWALKPGGTLGVWSGTPDRKFKARLQRLGFTVEEVRRPASGSSGPRHVIWLATQP

Specific function: Unknown

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24017; Mature: 24017

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEWVHLETSDVPGGGKSLALMQRGGEFSIVVGNIELMNSTRGASEEALASLTCARLTGR
CCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC
PAPRILIGGLGMGFTLRAALRELGPDARIVVAELVPAVAAWARGPLASIFAGCLDDPRVE
CCCEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
LCETDVTRLIQSEAAGWDAILLDVDNGPEGLLRRANNRLYDEWGLKRAQWALKPGGTLGV
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCHHHHEEECCCCEEEE
WSGTPDRKFKARLQRLGFTVEEVRRPASGSSGPRHVIWLATQP
CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNEWVHLETSDVPGGGKSLALMQRGGEFSIVVGNIELMNSTRGASEEALASLTCARLTGR
CCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCC
PAPRILIGGLGMGFTLRAALRELGPDARIVVAELVPAVAAWARGPLASIFAGCLDDPRVE
CCCEEEEECCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHH
LCETDVTRLIQSEAAGWDAILLDVDNGPEGLLRRANNRLYDEWGLKRAQWALKPGGTLGV
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHHHHHCCHHHHEEECCCCEEEE
WSGTPDRKFKARLQRLGFTVEEVRRPASGSSGPRHVIWLATQP
CCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA