| Definition | Methylobacterium chloromethanicum CM4, complete genome. |
|---|---|
| Accession | NC_011757 |
| Length | 5,777,908 |
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The map label for this gene is pyk
Identifier: 218530921
GI number: 218530921
Start: 3133430
End: 3134866
Strand: Reverse
Name: pyk
Synonym: Mchl_2971
Alternate gene names: 218530921
Gene position: 3134866-3133430 (Counterclockwise)
Preceding gene: 218530923
Following gene: 218530904
Centisome position: 54.26
GC content: 69.1
Gene sequence:
>1437_bases TTGAAGCGCTCGCGCCGCACCAAGATCGTCGCTACCCTCGGCCCGGCATCCGATACGCCGGAGATGATCGAGAAGCTGTT CCACGCCGGTGCGGACGTGTTCCGCATCAACATGAGCCATCTGGCTCGCGAGAAACTGCCCGAACGCATCGAGGTGATTC GCACCATCGAGCGCGAGGCCAAGCGCCCCATCGGCATCCTCGTGGACCTTCAGGGCCCGAAGCTGCGGCTCGGCACCTTC GTGGGCGACGCGGCCGTGCTGGAGAACGGCCAGACCTTCGTGCTCGATTCGGATCCGACGCCGGGCGATACCGACCGCGT CTTCCTTCCCCATCCCGAGATCCTGTCGGCGCTGGAGCCCAGCCACGGCATCCTGATCGACGACGGCAAGCTTCGCCTCA TCGTCACCGAGGTGAGCGAGGGGCGTGCCGTCACCCGCGTCGAGGTCGGCGGGCGCATCTCGAATCGCAAGGGCGTGTCG CTGCCTCACACCGTGCTGCCGGTGCCGGCGATGACCGAGAAGGATCGCGGAGATCTGGAAGCGGGCCTCGCGGCCGGCGC CGACTGGATCGCGGTGTCCTTCGTGCAGCGCCCGGAAGACGTGGCGGAGGTCAAAAAGGTCGCCGCCGGGCGTGCCCTGG TGATGGCCAAGATCGAGAAGCCGCAGGCGCTCACCCGCCTCGACGAGATCATCGAGATCTCCGACGGCATCATGGTCGCC CGCGGCGACCTCGGCGTCGAGATGCCGCTCGAACAGGTGCCGGGCGTGCAGAAGCGCATCACCCGCGTCGCCCGCCGGCT CGGCAAGCCGGTCGTCGTCGCTACGCAGATGCTCGAATCGATGATCACCTCACCGGTGCCGACCCGCGCCGAGGTGTCGG ACGTGGCCACCGCCGTCTACGAGGGCGCGGATGCGGTGATGCTCTCGGCCGAAAGCGCCGCCGGCGACTTTCCGGTCGAG GCGATTGGCACCATGAACCGCATCGCCGAGCAGGTGGAGCGCGACGCGCTCTACTGGTCGATCCTGATGGCGCAGCGTTC CGAGCCGGAGCCGACGGCCTCCGACGCCATCGCGGCCGCTGCCCACCAGATCGTCGAGGCGCTGAGCCTGCGCTCGATCA TGGCCTGGACCCATTCCGGTTCGACGGTGCTGCGGCTGGCGCGCGCCCGGCCCAATGCCAGCGTCATCGCGCTGACGCCG AAGCGCGAGACGGCGCGGCGCCTCACCATGGCCTGGGGCGTGCACCCGATCGTCACCAAGGATGCCAGCGACGTGGACGA CATGGCCTTCCGCGCCGCGAAGTTCGCGGTGCGCGAGCGCTTCGCCGAGATCGGCGACCGGGTGATCATCGTGGCCGGCG TGCCGTTCGGCATTCCCGGGGCGACCAACATGGTGCGCATCGCCTTCGTCACCCGCGAGCACGCCGAGCGGGCGTAG
Upstream 100 bases:
>100_bases TCCGGCCATCGGCGCCCGCCCGCGCGCCACCCATCCGCCGGGCCGTTCCCGCACGCGGTCGCCGCGCCTCGCGGGTCCAG CGGGTATGATGGAGGCCCCT
Downstream 100 bases:
>100_bases AACAGCGTCCCGGATATCGGATCCGGGTGGACGCTCGATCGCGCGGAAGCTCTACCGCGCGATCGTCGCCGTCAACGCCT CGACCTCGCGCACGAGCGTG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MKRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREAKRPIGILVDLQGPKLRLGTF VGDAAVLENGQTFVLDSDPTPGDTDRVFLPHPEILSALEPSHGILIDDGKLRLIVTEVSEGRAVTRVEVGGRISNRKGVS LPHTVLPVPAMTEKDRGDLEAGLAAGADWIAVSFVQRPEDVAEVKKVAAGRALVMAKIEKPQALTRLDEIIEISDGIMVA RGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVE AIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTP KRETARRLTMAWGVHPIVTKDASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVPFGIPGATNMVRIAFVTREHAERA
Sequences:
>Translated_478_residues MKRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREAKRPIGILVDLQGPKLRLGTF VGDAAVLENGQTFVLDSDPTPGDTDRVFLPHPEILSALEPSHGILIDDGKLRLIVTEVSEGRAVTRVEVGGRISNRKGVS LPHTVLPVPAMTEKDRGDLEAGLAAGADWIAVSFVQRPEDVAEVKKVAAGRALVMAKIEKPQALTRLDEIIEISDGIMVA RGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVE AIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTP KRETARRLTMAWGVHPIVTKDASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVPFGIPGATNMVRIAFVTREHAERA >Mature_478_residues MKRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREAKRPIGILVDLQGPKLRLGTF VGDAAVLENGQTFVLDSDPTPGDTDRVFLPHPEILSALEPSHGILIDDGKLRLIVTEVSEGRAVTRVEVGGRISNRKGVS LPHTVLPVPAMTEKDRGDLEAGLAAGADWIAVSFVQRPEDVAEVKKVAAGRALVMAKIEKPQALTRLDEIIEISDGIMVA RGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVYEGADAVMLSAESAAGDFPVE AIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAAAHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTP KRETARRLTMAWGVHPIVTKDASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVPFGIPGATNMVRIAFVTREHAERA
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family
Homologues:
Organism=Homo sapiens, GI10835121, Length=496, Percent_Identity=38.1048387096774, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=38.4146341463415, Blast_Score=287, Evalue=1e-77, Organism=Homo sapiens, GI33286418, Length=488, Percent_Identity=37.9098360655738, Blast_Score=286, Evalue=3e-77, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=37.4233128834356, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=37.4233128834356, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI310128732, Length=288, Percent_Identity=36.1111111111111, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI310128730, Length=288, Percent_Identity=36.1111111111111, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=31.5126050420168, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=31.5126050420168, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=30.3738317757009, Blast_Score=99, Evalue=9e-21, Organism=Escherichia coli, GI1787965, Length=461, Percent_Identity=36.2255965292842, Blast_Score=291, Evalue=5e-80, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=38.4615384615385, Blast_Score=279, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=34.4262295081967, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI71984413, Length=482, Percent_Identity=35.8921161825726, Blast_Score=261, Evalue=7e-70, Organism=Caenorhabditis elegans, GI17506829, Length=482, Percent_Identity=35.8921161825726, Blast_Score=261, Evalue=8e-70, Organism=Caenorhabditis elegans, GI71984406, Length=482, Percent_Identity=35.8921161825726, Blast_Score=261, Evalue=8e-70, Organism=Caenorhabditis elegans, GI17506831, Length=482, Percent_Identity=35.8921161825726, Blast_Score=260, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6319279, Length=487, Percent_Identity=33.8809034907598, Blast_Score=245, Evalue=1e-65, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=33.469387755102, Blast_Score=244, Evalue=2e-65, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=35.3783231083845, Blast_Score=274, Evalue=1e-73, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=35.3783231083845, Blast_Score=273, Evalue=1e-73, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=34.8039215686275, Blast_Score=238, Evalue=5e-63, Organism=Drosophila melanogaster, GI24581235, Length=489, Percent_Identity=31.6973415132924, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24646914, Length=260, Percent_Identity=37.6923076923077, Blast_Score=167, Evalue=2e-41,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KPYK_METEA (O05118)
Other databases:
- EMBL: U87316 - EMBL: CP001510 - RefSeq: YP_002963970.1 - GeneID: 7992827 - ProtClustDB: CLSK2331328 - BRENDA: 2.7.1.40 - GO: GO:0006096 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 - Gene3D: G3DSA:2.40.33.10 - Gene3D: G3DSA:3.20.20.60 - Gene3D: G3DSA:3.40.1380.20 - PANTHER: PTHR11817 - PRINTS: PR01050 - TIGRFAMs: TIGR01064
Pfam domain/function: PF00224 PK; PF02887 PK_C; SSF50800 PK_B_barrel_like; SSF52935 Pyruvate_kinase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =2.7.1.40
Molecular weight: Translated: 51802; Mature: 51802
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: BINDING 35-35 BINDING 242-242 BINDING 243-243 BINDING 275-275
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREA CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KRPIGILVDLQGPKLRLGTFVGDAAVLENGQTFVLDSDPTPGDTDRVFLPHPEILSALEP CCCEEEEEECCCCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEECCCHHHHHHCCC SHGILIDDGKLRLIVTEVSEGRAVTRVEVGGRISNRKGVSLPHTVLPVPAMTEKDRGDLE CCCEEEECCCEEEEEEECCCCCEEEEEEECCEECCCCCCCCCCCEECCCCCCCCCCCCHH AGLAAGADWIAVSFVQRPEDVAEVKKVAAGRALVMAKIEKPQALTRLDEIIEISDGIMVA HHHHCCCHHEEHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEE RGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EGADAVMLSAESAAGDFPVEAIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTPKRETARRLTMAWGVHPIVTK HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEC DASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVPFGIPGATNMVRIAFVTREHAERA CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEEEHHHHCCC >Mature Secondary Structure MKRSRRTKIVATLGPASDTPEMIEKLFHAGADVFRINMSHLAREKLPERIEVIRTIEREA CCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KRPIGILVDLQGPKLRLGTFVGDAAVLENGQTFVLDSDPTPGDTDRVFLPHPEILSALEP CCCEEEEEECCCCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCEEECCCHHHHHHCCC SHGILIDDGKLRLIVTEVSEGRAVTRVEVGGRISNRKGVSLPHTVLPVPAMTEKDRGDLE CCCEEEECCCEEEEEEECCCCCEEEEEEECCEECCCCCCCCCCCEECCCCCCCCCCCCHH AGLAAGADWIAVSFVQRPEDVAEVKKVAAGRALVMAKIEKPQALTRLDEIIEISDGIMVA HHHHCCCHHEEHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEE RGDLGVEMPLEQVPGVQKRITRVARRLGKPVVVATQMLESMITSPVPTRAEVSDVATAVY ECCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH EGADAVMLSAESAAGDFPVEAIGTMNRIAEQVERDALYWSILMAQRSEPEPTASDAIAAA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AHQIVEALSLRSIMAWTHSGSTVLRLARARPNASVIALTPKRETARRLTMAWGVHPIVTK HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEC DASDVDDMAFRAAKFAVRERFAEIGDRVIIVAGVPFGIPGATNMVRIAFVTREHAERA CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA