| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is pgk [H]
Identifier: 294514842
GI number: 294514842
Start: 2832249
End: 2833427
Strand: Reverse
Name: pgk [H]
Synonym: NA
Alternate gene names: 294514842
Gene position: 2833427-2832249 (Counterclockwise)
Preceding gene: 218710595
Following gene: 218710594
Centisome position: 85.88
GC content: 45.8
Gene sequence:
>1179_bases TTGAGAGGACAAATCATGTCTGTGATCAAGATGACTGACCTGGAACTTGCAGGTAAACGCGTATTCATCCGTGCTGACCT AAACGTACCAGTAAAAGACGGTAAAGTAACTTCAGATGCACGTATCCTTGCATCTCTACCAACTATCAAACTTTGCCTAG AAGCTGGCGCAAAAGTTATGGTTACTTCTCACCTTGGTCGTCCTACTGAAGGCGAGTACAACGAAGAGTTCTCTCTAGCT CCTGTAGTTAACTACCTAAACGACGCACTAGACTGTGACGTTAAACTAGCGAAAGATTACGTAAATGGTCTTGAGCTAAA CGCTGGTGAACTAACTGTTCTTGAAAACGTTCGCTTTAACAAAGGCGAGAAGAAGAACGAAGAAGCTCTTTCTAAGCAAT ACGCTGCACTATGTGACATCTTCGTAATGGATGCATTCGGTACAGCTCACCGTGCTCAAGCGTCTACACACGGCGTTGGT ACTTACGCTCCTGTAGCATGTGCTGGTCCTCTTCTAGCTGCTGAGCTTGAAGCTCTTGGTAAAGCAATGGACAACCCAGC TCGCCCACTAGTGGCTATCGTTGGTGGTTCTAAAGTTTCTACTAAACTAACCGTTCTAGAATCTCTTTCTAAAATCGCTG ACCAACTTGTTGTTGGTGGTGGTATCGCGAACACGTTCATCGCTGCTGAAGGCCACAACGTAGGTAAGTCTCTATACGAA GCTGACCTAGTTGAAACAGCTCAGAAGCTAATGAAAGAGTGTGCTATCCCAGTAGCGACTGACGTTGCATGTGCTAAAGC ATTCGACGAAAACGCAGAAGCTGAAATCAAGCACGTTTCTGAAGTTCAAGACGACGACATGATCTTCGACCTTGGTCCAG ATTCAACTGCAGCTCTAGCTGAAATCATCGGCAACGCGAAAACTATTCTTTGGAACGGCCCTGTAGGTGTATTCGAATTC AAGAACTTTGAAGCGGGTACAGCTGGTATTTCTAAAGCAATCGCTGATTCTGAAGGTTTCTCAGTAGCGGGCGGTGGTGA CACGCTAGCAGCTATCGACAAGTTCGGTATCAAAGCAGATGTTTCTTACATCTCTACTGGTGGCGGTGCTTTCCTTGAGT TTGTTGAAGGCAAAGTACTTCCTGCAGTAGCTATGCTTGAAGAGCGTGCTAAAGCGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: 3-phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
NA
Sequences:
>Translated_392_residues MRGQIMSVIKMTDLELAGKRVFIRADLNVPVKDGKVTSDARILASLPTIKLCLEAGAKVMVTSHLGRPTEGEYNEEFSLA PVVNYLNDALDCDVKLAKDYVNGLELNAGELTVLENVRFNKGEKKNEEALSKQYAALCDIFVMDAFGTAHRAQASTHGVG TYAPVACAGPLLAAELEALGKAMDNPARPLVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAEGHNVGKSLYE ADLVETAQKLMKECAIPVATDVACAKAFDENAEAEIKHVSEVQDDDMIFDLGPDSTAALAEIIGNAKTILWNGPVGVFEF KNFEAGTAGISKAIADSEGFSVAGGGDTLAAIDKFGIKADVSYISTGGGAFLEFVEGKVLPAVAMLEERAKA >Mature_392_residues MRGQIMSVIKMTDLELAGKRVFIRADLNVPVKDGKVTSDARILASLPTIKLCLEAGAKVMVTSHLGRPTEGEYNEEFSLA PVVNYLNDALDCDVKLAKDYVNGLELNAGELTVLENVRFNKGEKKNEEALSKQYAALCDIFVMDAFGTAHRAQASTHGVG TYAPVACAGPLLAAELEALGKAMDNPARPLVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAEGHNVGKSLYE ADLVETAQKLMKECAIPVATDVACAKAFDENAEAEIKHVSEVQDDDMIFDLGPDSTAALAEIIGNAKTILWNGPVGVFEF KNFEAGTAGISKAIADSEGFSVAGGGDTLAAIDKFGIKADVSYISTGGGAFLEFVEGKVLPAVAMLEERAKA
Specific function: Second phase of glycolysis; second step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=38.2566585956416, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI4505763, Length=413, Percent_Identity=38.498789346247, Blast_Score=248, Evalue=7e-66, Organism=Escherichia coli, GI1789294, Length=386, Percent_Identity=76.6839378238342, Blast_Score=600, Evalue=1e-173, Organism=Caenorhabditis elegans, GI17508823, Length=418, Percent_Identity=39.9521531100478, Blast_Score=263, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6319857, Length=424, Percent_Identity=39.3867924528302, Blast_Score=265, Evalue=9e-72, Organism=Drosophila melanogaster, GI17136394, Length=415, Percent_Identity=41.2048192771084, Blast_Score=254, Evalue=7e-68, Organism=Drosophila melanogaster, GI24581203, Length=422, Percent_Identity=38.6255924170616, Blast_Score=242, Evalue=3e-64,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41201; Mature: 41201
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGQIMSVIKMTDLELAGKRVFIRADLNVPVKDGKVTSDARILASLPTIKLCLEAGAKVM CCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEE VTSHLGRPTEGEYNEEFSLAPVVNYLNDALDCDVKLAKDYVNGLELNAGELTVLENVRFN EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC KGEKKNEEALSKQYAALCDIFVMDAFGTAHRAQASTHGVGTYAPVACAGPLLAAELEALG CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHH KAMDNPARPLVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAEGHNVGKSLYE HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCHHHHEEEECCCHHHHHHHH ADLVETAQKLMKECAIPVATDVACAKAFDENAEAEIKHVSEVQDDDMIFDLGPDSTAALA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHH EIIGNAKTILWNGPVGVFEFKNFEAGTAGISKAIADSEGFSVAGGGDTLAAIDKFGIKAD HHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCEEE VSYISTGGGAFLEFVEGKVLPAVAMLEERAKA CCEEECCCHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRGQIMSVIKMTDLELAGKRVFIRADLNVPVKDGKVTSDARILASLPTIKLCLEAGAKVM CCCHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCCEEE VTSHLGRPTEGEYNEEFSLAPVVNYLNDALDCDVKLAKDYVNGLELNAGELTVLENVRFN EEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCC KGEKKNEEALSKQYAALCDIFVMDAFGTAHRAQASTHGVGTYAPVACAGPLLAAELEALG CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHH KAMDNPARPLVAIVGGSKVSTKLTVLESLSKIADQLVVGGGIANTFIAAEGHNVGKSLYE HHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCHHHHEEEECCCHHHHHHHH ADLVETAQKLMKECAIPVATDVACAKAFDENAEAEIKHVSEVQDDDMIFDLGPDSTAALA HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCHHHHH EIIGNAKTILWNGPVGVFEFKNFEAGTAGISKAIADSEGFSVAGGGDTLAAIDKFGIKAD HHHCCCEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHCCCEEE VSYISTGGGAFLEFVEGKVLPAVAMLEERAKA CCEEECCCHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA