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The map label for this gene is 218710997

Identifier: 218710997

GI number: 218710997

Start: 3260577

End: 3261668

Strand: Reverse

Name: 218710997

Synonym: VS_3125

Alternate gene names: NA

Gene position: 3261668-3260577 (Counterclockwise)

Preceding gene: 218711004

Following gene: 218710996

Centisome position: 98.86

GC content: 47.25

Gene sequence:

>1092_bases
ATGCGTCATTTTTCCCCCGCTTTATCTCTTATTTGTGCCTCGCTTTCGTTCGCCGTTATGGCTGAAAATAGTGAGCAACC
TTTAACCATTAAACAAGGCGCACCCGAGGCGTATGTGGTGGTGAAGGGCGATACTTTGTGGGATATCTCCGCGATGTATC
TTGATAGTCCATGGCTGTGGCCGAGGTTGTGGCAGGTAAATCCTGAGATAGAAAACCCTCACCTTATTTACCCCGGAGAT
AAATTGTCTCTGGTTTGGGTTAATGGTGAGCCTGTATTGAGCCTCAAACCCGTCATCAAGCTAAGCCCTAAGATTCGTGT
ATCAGAGAAGAAAGCAGTACCTACCGTGAATGAGGCGCTTGTTCTACCGTATCTACAATCTGATCGTTTGGTTGAGCAAC
AAGATATCCAATCTGCTCAACGAGTGTTGGGGACAAGTGATGGCAAACGTTTCTTATCGGGTGAAGACCGACTATTTATC
TCGGGTAACCAGCAACATCAAAAATGGGGTATTTACCGTTCTGTCGAAACTTACCAACGACAGCAACCTCAAGCTAGTAT
GACTTCTTTGCGTTTGGTCGCCACGGCGCGCTTAAAAGAGGTGGATGCTGAGTTCAGTAGTTTGCAAATAGAGACTCAGC
TGCAAGAGGTACTGCTCAACGACCTCGTGTTACCAGAACTTGGCGTTGATCAGGTGAAGCTCTCAACCACATTTTATCCT
GCGCCTAGTGCTGCGGGTCAGTTTGCTAATATCTTGGGTTCATTAGATGGCAGCCAATACAGTGCAAAGAATCAGGTCGT
GGTTATTAACAAAGGCTCGCAAGACAATCTTCGCCAAGGCTCTATGTTTACGCTCAGCGAAAGCGGTGCGGTGGTGTTTG
GTAAGCAAGGCGAATACAGCTATAAAGAGTCGGCGGCGAGCGATAAGGTGCAATTGCCAAGTACCTCACTTGGTAGTTTG
ATGGTCATTCGTCCTTATGAGTATTTTAGCTTGGCTTTGATCACTCAGAGCTCTAAGCCTGTTAGCAATGACATTCTGGC
GGTATCGCCTTTGGACCTTGCTTTGACGGAAGAGCTTAAGGGCACCGAGTGA

Upstream 100 bases:

>100_bases
CTTGTTGGCTCAATTCTAGACATTTTAGAGGTCAAATGACAGCATCCTGAAGGTAATTCTCTAATCAGATGTCATATATT
CAGACCAAGGAACCTAGGTC

Downstream 100 bases:

>100_bases
ATGAGCAACAACTGAGCGCTTGGCTAACTCTAAGTTTTGTACCGCAATTGGGTGGCAAGCGACTTTCTCGACTGCTGAGC
ATTGATTCTCCTTTTAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Lysm Domain Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MRHFSPALSLICASLSFAVMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLWPRLWQVNPEIENPHLIYPGD
KLSLVWVNGEPVLSLKPVIKLSPKIRVSEKKAVPTVNEALVLPYLQSDRLVEQQDIQSAQRVLGTSDGKRFLSGEDRLFI
SGNQQHQKWGIYRSVETYQRQQPQASMTSLRLVATARLKEVDAEFSSLQIETQLQEVLLNDLVLPELGVDQVKLSTTFYP
APSAAGQFANILGSLDGSQYSAKNQVVVINKGSQDNLRQGSMFTLSESGAVVFGKQGEYSYKESAASDKVQLPSTSLGSL
MVIRPYEYFSLALITQSSKPVSNDILAVSPLDLALTEELKGTE

Sequences:

>Translated_363_residues
MRHFSPALSLICASLSFAVMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLWPRLWQVNPEIENPHLIYPGD
KLSLVWVNGEPVLSLKPVIKLSPKIRVSEKKAVPTVNEALVLPYLQSDRLVEQQDIQSAQRVLGTSDGKRFLSGEDRLFI
SGNQQHQKWGIYRSVETYQRQQPQASMTSLRLVATARLKEVDAEFSSLQIETQLQEVLLNDLVLPELGVDQVKLSTTFYP
APSAAGQFANILGSLDGSQYSAKNQVVVINKGSQDNLRQGSMFTLSESGAVVFGKQGEYSYKESAASDKVQLPSTSLGSL
MVIRPYEYFSLALITQSSKPVSNDILAVSPLDLALTEELKGTE
>Mature_363_residues
MRHFSPALSLICASLSFAVMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLWPRLWQVNPEIENPHLIYPGD
KLSLVWVNGEPVLSLKPVIKLSPKIRVSEKKAVPTVNEALVLPYLQSDRLVEQQDIQSAQRVLGTSDGKRFLSGEDRLFI
SGNQQHQKWGIYRSVETYQRQQPQASMTSLRLVATARLKEVDAEFSSLQIETQLQEVLLNDLVLPELGVDQVKLSTTFYP
APSAAGQFANILGSLDGSQYSAKNQVVVINKGSQDNLRQGSMFTLSESGAVVFGKQGEYSYKESAASDKVQLPSTSLGSL
MVIRPYEYFSLALITQSSKPVSNDILAVSPLDLALTEELKGTE

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40106; Mature: 40106

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHFSPALSLICASLSFAVMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLW
CCCCHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEEEECCCEEEEEEEEECCCCCC
PRLWQVNPEIENPHLIYPGDKLSLVWVNGEPVLSLKPVIKLSPKIRVSEKKAVPTVNEAL
CEEEEECCCCCCCEEEECCCEEEEEEECCCCEEEECCEEEECCCEEECCCCCCCCCCCEE
VLPYLQSDRLVEQQDIQSAQRVLGTSDGKRFLSGEDRLFISGNQQHQKWGIYRSVETYQR
EEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCHHCCHHHHHHHHHH
QQPQASMTSLRLVATARLKEVDAEFSSLQIETQLQEVLLNDLVLPELGVDQVKLSTTFYP
CCCCHHHHHEEHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
APSAAGQFANILGSLDGSQYSAKNQVVVINKGSQDNLRQGSMFTLSESGAVVFGKQGEYS
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCC
YKESAASDKVQLPSTSLGSLMVIRPYEYFSLALITQSSKPVSNDILAVSPLDLALTEELK
HHHCCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCEEEHHHCC
GTE
CCC
>Mature Secondary Structure
MRHFSPALSLICASLSFAVMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLW
CCCCHHHHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEEEECCCEEEEEEEEECCCCCC
PRLWQVNPEIENPHLIYPGDKLSLVWVNGEPVLSLKPVIKLSPKIRVSEKKAVPTVNEAL
CEEEEECCCCCCCEEEECCCEEEEEEECCCCEEEECCEEEECCCEEECCCCCCCCCCCEE
VLPYLQSDRLVEQQDIQSAQRVLGTSDGKRFLSGEDRLFISGNQQHQKWGIYRSVETYQR
EEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCHHCCHHHHHHHHHH
QQPQASMTSLRLVATARLKEVDAEFSSLQIETQLQEVLLNDLVLPELGVDQVKLSTTFYP
CCCCHHHHHEEHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
APSAAGQFANILGSLDGSQYSAKNQVVVINKGSQDNLRQGSMFTLSESGAVVFGKQGEYS
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCC
YKESAASDKVQLPSTSLGSLMVIRPYEYFSLALITQSSKPVSNDILAVSPLDLALTEELK
HHHCCCCCEEECCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCEEEHHHCC
GTE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA