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The map label for this gene is yhhN [H]

Identifier: 218710924

GI number: 218710924

Start: 3172451

End: 3173113

Strand: Reverse

Name: yhhN [H]

Synonym: VS_3027

Alternate gene names: 218710924

Gene position: 3173113-3172451 (Counterclockwise)

Preceding gene: 218710925

Following gene: 218710923

Centisome position: 96.18

GC content: 44.65

Gene sequence:

>663_bases
GTGCCTAGACTGGCGACGATTAAAAGCAATAGGGCAAATGATATGTGGAGTTGGTTGGCGGTTTCCTTGTCTGGTATTGG
AGCAATAACAGGAACGAAACATGGGCATATCGGTCAGGCTTTATTGTATAAGGTCTTTACCTTTGTATTATTGGCGACTA
TTGCTCTAACTCAATCTGTTGTCGTTGATTTTACCTATTGGGTAGTCGTTGGATTAGCGATATCCGCGATCGCAGATGTG
CTTCATACTGTTACTCAAAAACGTCTTCTGCATTTTGTGTGTTTCCTGTTGGCTCAACTTTGTTACAGCAAAGCATTTTG
GTTACAGCTATCAGGAGAAATGGTCTGGTGGTTGTTCGCGCTGCTGTTAGCTGCATGTATCGTTGCTTTCTTCCTATTAC
TCCCTCGCTTAGACAAACTCGTTTTTCCAGTGGTTATCATGGGTATTGTACTCATTCAGCTTGCTTGGGCTTCTGGTGAA
GTCTGGTTACTTGAGCCTCAGCTATCACATGCTGTTGGTTTTGTTGGTTGCTGCGTGCTGCTGCTTTCCGCATTGGCGTA
CGCCCTAAATTTCTATCGCAGCCCAATTAAGGGCGCTTATTTTTGGGTAACGGGCAGTTACTTTCTTGCACACGCTCTCA
TCGTTGCTTCCCTCACCATTTAA

Upstream 100 bases:

>100_bases
CTGCGGGTATTGTGACGACTTCAATCTAAAGATGCTCTTTTTAGTGGAAGCGTAATCAAGATCCAATTTTGAAGGGCTGA
GGCTTTACATCAACACCCGT

Downstream 100 bases:

>100_bases
GCTAGAGCTAGCTTAACTCTGAGCTACATCAAGGCAGCTCAGATGAAAGTAGGTACTCTACGTCTACTTCATTAAATATG
AGATAGAGTTATGACTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPRLATIKSNRANDMWSWLAVSLSGIGAITGTKHGHIGQALLYKVFTFVLLATIALTQSVVVDFTYWVVVGLAISAIADV
LHTVTQKRLLHFVCFLLAQLCYSKAFWLQLSGEMVWWLFALLLAACIVAFFLLLPRLDKLVFPVVIMGIVLIQLAWASGE
VWLLEPQLSHAVGFVGCCVLLLSALAYALNFYRSPIKGAYFWVTGSYFLAHALIVASLTI

Sequences:

>Translated_220_residues
MPRLATIKSNRANDMWSWLAVSLSGIGAITGTKHGHIGQALLYKVFTFVLLATIALTQSVVVDFTYWVVVGLAISAIADV
LHTVTQKRLLHFVCFLLAQLCYSKAFWLQLSGEMVWWLFALLLAACIVAFFLLLPRLDKLVFPVVIMGIVLIQLAWASGE
VWLLEPQLSHAVGFVGCCVLLLSALAYALNFYRSPIKGAYFWVTGSYFLAHALIVASLTI
>Mature_219_residues
PRLATIKSNRANDMWSWLAVSLSGIGAITGTKHGHIGQALLYKVFTFVLLATIALTQSVVVDFTYWVVVGLAISAIADVL
HTVTQKRLLHFVCFLLAQLCYSKAFWLQLSGEMVWWLFALLLAACIVAFFLLLPRLDKLVFPVVIMGIVLIQLAWASGEV
WLLEPQLSHAVGFVGCCVLLLSALAYALNFYRSPIKGAYFWVTGSYFLAHALIVASLTI

Specific function: Unknown

COG id: COG3714

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM86 family [H]

Homologues:

Organism=Escherichia coli, GI1789878, Length=206, Percent_Identity=27.6699029126214, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012506 [H]

Pfam domain/function: PF07947 YhhN [H]

EC number: NA

Molecular weight: Translated: 24308; Mature: 24177

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLATIKSNRANDMWSWLAVSLSGIGAITGTKHGHIGQALLYKVFTFVLLATIALTQSV
CCCCCCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVDFTYWVVVGLAISAIADVLHTVTQKRLLHFVCFLLAQLCYSKAFWLQLSGEMVWWLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLLAACIVAFFLLLPRLDKLVFPVVIMGIVLIQLAWASGEVWLLEPQLSHAVGFVGCCVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
LLSALAYALNFYRSPIKGAYFWVTGSYFLAHALIVASLTI
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRLATIKSNRANDMWSWLAVSLSGIGAITGTKHGHIGQALLYKVFTFVLLATIALTQSV
CCCCCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVDFTYWVVVGLAISAIADVLHTVTQKRLLHFVCFLLAQLCYSKAFWLQLSGEMVWWLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LLLAACIVAFFLLLPRLDKLVFPVVIMGIVLIQLAWASGEVWLLEPQLSHAVGFVGCCVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHH
LLSALAYALNFYRSPIKGAYFWVTGSYFLAHALIVASLTI
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]