| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yecH [C]
Identifier: 218710923
GI number: 218710923
Start: 3172124
End: 3172360
Strand: Reverse
Name: yecH [C]
Synonym: VS_3026
Alternate gene names: 218710923
Gene position: 3172360-3172124 (Counterclockwise)
Preceding gene: 218710924
Following gene: 218710922
Centisome position: 96.15
GC content: 43.88
Gene sequence:
>237_bases ATGACTACCGAAATTCATGCACACAACGTTTTAAATCTACTGAGTGAAAAGCCGCTGACTCGTGAAGAGTTGACGCAAGA GCTTGCTCAAACCTATGGCGCTGAAGCTCGCTTTCATACGTGTAAGCTGAACGGTCTGGATTTGGATGGCCTACTGAAGT TTTTCCTGAAAATGGAAAAGGTCGTGATCATTGATGACAAGCTTTGCACTAATCGCGAACGTGTTTGTAATCACTGA
Upstream 100 bases:
>100_bases CACCATTTAAGCTAGAGCTAGCTTAACTCTGAGCTACATCAAGGCAGCTCAGATGAAAGTAGGTACTCTACGTCTACTTC ATTAAATATGAGATAGAGTT
Downstream 100 bases:
>100_bases TCTTGAATGACCATCAGTTCTTGTCGTCGGTGAACAGTGAACTGTGATTAGCGAGTGGATGCGATATTCTTGGCTCCACT CCGACCATTTCTCCCTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MTTEIHAHNVLNLLSEKPLTREELTQELAQTYGAEARFHTCKLNGLDLDGLLKFFLKMEKVVIIDDKLCTNRERVCNH
Sequences:
>Translated_78_residues MTTEIHAHNVLNLLSEKPLTREELTQELAQTYGAEARFHTCKLNGLDLDGLLKFFLKMEKVVIIDDKLCTNRERVCNH >Mature_77_residues TTEIHAHNVLNLLSEKPLTREELTQELAQTYGAEARFHTCKLNGLDLDGLLKFFLKMEKVVIIDDKLCTNRERVCNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9012; Mature: 8880
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEIHAHNVLNLLSEKPLTREELTQELAQTYGAEARFHTCKLNGLDLDGLLKFFLKMEK CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCC VVIIDDKLCTNRERVCNH EEEECCCHHCCHHHHCCC >Mature Secondary Structure TTEIHAHNVLNLLSEKPLTREELTQELAQTYGAEARFHTCKLNGLDLDGLLKFFLKMEK CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCC VVIIDDKLCTNRERVCNH EEEECCCHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA