| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710903
Identifier: 218710903
GI number: 218710903
Start: 3156274
End: 3157158
Strand: Reverse
Name: 218710903
Synonym: VS_3005
Alternate gene names: NA
Gene position: 3157158-3156274 (Counterclockwise)
Preceding gene: 218710904
Following gene: 218710902
Centisome position: 95.69
GC content: 46.89
Gene sequence:
>885_bases ATGATGATGCCAAACCCAACCAAACCTCAAATGAAGCCGCTTATTCGTAAGTCGCACACCTATGATCAAAAGGCTTCTTC TGATCTCGGGTCAGCACATCAAGAATTCCAAGTACCGACGAATCTTGTTCAACACCTTTGGTTTCGCAGCCGCGAAAGCC TAGCCGATGACGGTCTTGTTTATGACCCTATTGCAGCACAAGCCTGCAAGCGTTGCCAACTCGCACCTGAATGCCTTACC GGTGAACTCGACCAGCAACAACTCCTTTACGCGACACTGACTCAACTTTGTGACTCTCAAGTTCAACAGTTTTTATCTCA TAACCCAGATGCTTGGATTATTAACGTGGGAGCAGGGCTCGATACCCGTTTCTACCGTTTAGATAATGGCCGCTGTCATT GGGTTGAGCTAGATGTAACCGAGAACTTAGTTTGGCGACAACGCCTGTTCCACAAGAATGAACGCTACCGTCTAGAGTGT GGCTCGGTGGATGACCTGACCTGGTTGGATGAACTTAATATTCCAGAACAAGCCTCAGTGATGGTGGTGTGTGAACATGC TCTGTTGGATTGCAATGAACAACAGACGGCGAACTTTATTCAGTCTTTGAGCCGTTATTTTACCCACGCACATGCGTGTT TAGTGTTAGCTGGAGATAAAAGCTCTAGTGCTCTGGGGCAAAAGCTCGGTTCTGGAAAATACGCACATGGCTTATCTTCT CCGATAGACAGCGTCCTTAATTGGCTGCCATGGGCTCAGTGGGTAAAAGCGTTTTCTCCACTTGACCAGCAGTGTAATCG TTGGAAATTTTGGCAACGACTTCTTTGTAAAATCTCTCAGGTCAAAAAGCGTTTAACGCCGCAGTTAGTGCTTGTTAAGT GGTAG
Upstream 100 bases:
>100_bases TGGATGTAGTCAGTGCAAACAGCTTATTGATATTTACTCTCAATAACTTGTTATTGTAATTGATATTCATTATCATCTTC TTTGTCGAGATACAAGGAAG
Downstream 100 bases:
>100_bases TGCTAGCGGTTCTGTTGGCAGGTATCTGAATACTTGCCTCGTTATAGGTATTCGTTATCGATAAAAGGCAAGCACCTCCC ACACCATAGTGAAAGCCCAC
Product: O-methyltransferase-like protein
Products: NA
Alternate protein names: Polyketide Methyltransferase; O-Methyltransferase Domain Protein; O-Methyltransferase-Like Protein; O-Methyltransferase; O-Methyltransferase Domain-Containing Protein; O-Methyltransferase Protein; O-Methyltransferase Involved In Polyketide Biosynthesis; O-Methyltransferase-Related Protein; Polyketide Biosynthesis O-Methyltransferase; O-Methyltransferase-Relateprotein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MMMPNPTKPQMKPLIRKSHTYDQKASSDLGSAHQEFQVPTNLVQHLWFRSRESLADDGLVYDPIAAQACKRCQLAPECLT GELDQQQLLYATLTQLCDSQVQQFLSHNPDAWIINVGAGLDTRFYRLDNGRCHWVELDVTENLVWRQRLFHKNERYRLEC GSVDDLTWLDELNIPEQASVMVVCEHALLDCNEQQTANFIQSLSRYFTHAHACLVLAGDKSSSALGQKLGSGKYAHGLSS PIDSVLNWLPWAQWVKAFSPLDQQCNRWKFWQRLLCKISQVKKRLTPQLVLVKW
Sequences:
>Translated_294_residues MMMPNPTKPQMKPLIRKSHTYDQKASSDLGSAHQEFQVPTNLVQHLWFRSRESLADDGLVYDPIAAQACKRCQLAPECLT GELDQQQLLYATLTQLCDSQVQQFLSHNPDAWIINVGAGLDTRFYRLDNGRCHWVELDVTENLVWRQRLFHKNERYRLEC GSVDDLTWLDELNIPEQASVMVVCEHALLDCNEQQTANFIQSLSRYFTHAHACLVLAGDKSSSALGQKLGSGKYAHGLSS PIDSVLNWLPWAQWVKAFSPLDQQCNRWKFWQRLLCKISQVKKRLTPQLVLVKW >Mature_294_residues MMMPNPTKPQMKPLIRKSHTYDQKASSDLGSAHQEFQVPTNLVQHLWFRSRESLADDGLVYDPIAAQACKRCQLAPECLT GELDQQQLLYATLTQLCDSQVQQFLSHNPDAWIINVGAGLDTRFYRLDNGRCHWVELDVTENLVWRQRLFHKNERYRLEC GSVDDLTWLDELNIPEQASVMVVCEHALLDCNEQQTANFIQSLSRYFTHAHACLVLAGDKSSSALGQKLGSGKYAHGLSS PIDSVLNWLPWAQWVKAFSPLDQQCNRWKFWQRLLCKISQVKKRLTPQLVLVKW
Specific function: Unknown
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33796; Mature: 33796
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMPNPTKPQMKPLIRKSHTYDQKASSDLGSAHQEFQVPTNLVQHLWFRSRESLADDGLV CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE YDPIAAQACKRCQLAPECLTGELDQQQLLYATLTQLCDSQVQQFLSHNPDAWIINVGAGL ECHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC DTRFYRLDNGRCHWVELDVTENLVWRQRLFHKNERYRLECGSVDDLTWLDELNIPEQASV CCEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCCCCCCHH MVVCEHALLDCNEQQTANFIQSLSRYFTHAHACLVLAGDKSSSALGQKLGSGKYAHGLSS HHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCHHCCCCH PIDSVLNWLPWAQWVKAFSPLDQQCNRWKFWQRLLCKISQVKKRLTPQLVLVKW HHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MMMPNPTKPQMKPLIRKSHTYDQKASSDLGSAHQEFQVPTNLVQHLWFRSRESLADDGLV CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE YDPIAAQACKRCQLAPECLTGELDQQQLLYATLTQLCDSQVQQFLSHNPDAWIINVGAGL ECHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC DTRFYRLDNGRCHWVELDVTENLVWRQRLFHKNERYRLECGSVDDLTWLDELNIPEQASV CCEEEEECCCEEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHCCCCCCCCHH MVVCEHALLDCNEQQTANFIQSLSRYFTHAHACLVLAGDKSSSALGQKLGSGKYAHGLSS HHEEHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCHHCCCCH PIDSVLNWLPWAQWVKAFSPLDQQCNRWKFWQRLLCKISQVKKRLTPQLVLVKW HHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA