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The map label for this gene is yijD [H]

Identifier: 218710899

GI number: 218710899

Start: 3151931

End: 3152302

Strand: Reverse

Name: yijD [H]

Synonym: VS_3001

Alternate gene names: 218710899

Gene position: 3152302-3151931 (Counterclockwise)

Preceding gene: 218710900

Following gene: 218710897

Centisome position: 95.54

GC content: 42.74

Gene sequence:

>372_bases
ATGTCGAATGAAAATAATACTGTAAACCATGGTTCTGAAAGAAAGACACTCGTACTTGCTGTTGTAGCAGGTGTGTGTGG
TGATGCACTGTTATCTTGGGTAACAATGAGCGAAGTGGGCTTTTCTATCTTCCCACTGATTGCTTTAGTGTTGGCTGTAC
AAGCGCTATACCAAGAATACCTAACAAATCCAGTATCTGAAGATATTCCGTTAGTGGGTTTAGCTTGTTTCTTTGTAGGT
GCATTTGGCCACTCGGCTTTTGTGAAAGCACAACACCCTGATGCAGGTTCAAACTTCTTTGCGATTATTGTCGCGATGCT
ACTGCTCGCTTGGGTAGGTAAGAAGCTAGGCTTTATCGGTAAAACCGCTTAA

Upstream 100 bases:

>100_bases
TGGCTGAGCGTTTGATCATGCAATTGCGAATGATGGCCAAAGGAGCTTTTTGGTATCGTAAAGAACGTGAACGTAACCGA
TTAAAAGGCGGGATTGAATA

Downstream 100 bases:

>100_bases
ACCAACGTATAAATAAAAAAACGAGCCAATTGGCTCGTTTTTTTGTATCTGGTGCTTAGCTCCGACTTAGAGAGCGAGGT
TTACGCTTTACGCTCTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSNENNTVNHGSERKTLVLAVVAGVCGDALLSWVTMSEVGFSIFPLIALVLAVQALYQEYLTNPVSEDIPLVGLACFFVG
AFGHSAFVKAQHPDAGSNFFAIIVAMLLLAWVGKKLGFIGKTA

Sequences:

>Translated_123_residues
MSNENNTVNHGSERKTLVLAVVAGVCGDALLSWVTMSEVGFSIFPLIALVLAVQALYQEYLTNPVSEDIPLVGLACFFVG
AFGHSAFVKAQHPDAGSNFFAIIVAMLLLAWVGKKLGFIGKTA
>Mature_122_residues
SNENNTVNHGSERKTLVLAVVAGVCGDALLSWVTMSEVGFSIFPLIALVLAVQALYQEYLTNPVSEDIPLVGLACFFVGA
FGHSAFVKAQHPDAGSNFFAIIVAMLLLAWVGKKLGFIGKTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790402, Length=105, Percent_Identity=39.0476190476191, Blast_Score=86, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009867
- ProDom:   PD076479 [H]

Pfam domain/function: PF07226 DUF1422 [H]

EC number: NA

Molecular weight: Translated: 13057; Mature: 12926

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNENNTVNHGSERKTLVLAVVAGVCGDALLSWVTMSEVGFSIFPLIALVLAVQALYQEY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LTNPVSEDIPLVGLACFFVGAFGHSAFVKAQHPDAGSNFFAIIVAMLLLAWVGKKLGFIG
HCCCCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KTA
CCC
>Mature Secondary Structure 
SNENNTVNHGSERKTLVLAVVAGVCGDALLSWVTMSEVGFSIFPLIALVLAVQALYQEY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LTNPVSEDIPLVGLACFFVGAFGHSAFVKAQHPDAGSNFFAIIVAMLLLAWVGKKLGFIG
HCCCCCCCCCHHHHHHHHHHHHCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KTA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]