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The map label for this gene is secE [H]

Identifier: 218710886

GI number: 218710886

Start: 3132352

End: 3132687

Strand: Reverse

Name: secE [H]

Synonym: VS_2971

Alternate gene names: 218710886

Gene position: 3132687-3132352 (Counterclockwise)

Preceding gene: 218710887

Following gene: 218710885

Centisome position: 94.95

GC content: 43.45

Gene sequence:

>336_bases
ATGAAAGCAAACGCTGAAACTCCTGATAGCTCAGGTGCAGCAGATACAATGAAGTGGGTAGTCGCTTTTGTACTGTTGGC
TGCTGCTGTTGTGGGTAATTACCTGTATGGTGAATTGTCTGTTGTAATTCGCGCTGCAGGTGTAGTTGTGCTGATTGCTG
CCGCACTAGGCGTTGCAGCAACAACAACTAAAGGTAAAGCTGCGATCGATTTTGCAAAAGAATCTCGTATGGAGATTCGT
AAAAGTTGTTTGGCTTTCTCGCCAAGCAACTATGCAAACTACATTGATCGTTTTAGCTGTATGTATTGTTATGTCTCTAG
TGCTTTGGGGAATTGA

Upstream 100 bases:

>100_bases
AAATGACTGTTAGATGTGTTGTTTTGCAACGCAAAGGAATGTGCCCTGCAACAGCGGGGTTATTGTCGTCTATATTTAAG
ACTTATCACAGGTTGGTTTT

Downstream 100 bases:

>100_bases
CGGCATTATGGTCCGTTTAGTTTCTCTAGCAACTGGAGTGTAGAGGGTTCTGATTCATGAGTGAAGCTCCAAAAAAACGT
TGGTATGTAGTTCAAGCCTT

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKANAETPDSSGAADTMKWVVAFVLLAAAVVGNYLYGELSVVIRAAGVVVLIAAALGVAATTTKGKAAIDFAKESRMEIR
KSCLAFSPSNYANYIDRFSCMYCYVSSALGN

Sequences:

>Translated_111_residues
MKANAETPDSSGAADTMKWVVAFVLLAAAVVGNYLYGELSVVIRAAGVVVLIAAALGVAATTTKGKAAIDFAKESRMEIR
KSCLAFSPSNYANYIDRFSCMYCYVSSALGN
>Mature_111_residues
MKANAETPDSSGAADTMKWVVAFVLLAAAVVGNYLYGELSVVIRAAGVVVLIAAALGVAATTTKGKAAIDFAKESRMEIR
KSCLAFSPSNYANYIDRFSCMYCYVSSALGN

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=81, Percent_Identity=54.320987654321, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 11671; Mature: 11671

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANAETPDSSGAADTMKWVVAFVLLAAAVVGNYLYGELSVVIRAAGVVVLIAAALGVAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTTKGKAAIDFAKESRMEIRKSCLAFSPSNYANYIDRFSCMYCYVSSALGN
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKANAETPDSSGAADTMKWVVAFVLLAAAVVGNYLYGELSVVIRAAGVVVLIAAALGVAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTTKGKAAIDFAKESRMEIRKSCLAFSPSNYANYIDRFSCMYCYVSSALGN
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]