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The map label for this gene is 218710827

Identifier: 218710827

GI number: 218710827

Start: 3062944

End: 3063291

Strand: Reverse

Name: 218710827

Synonym: VS_2910

Alternate gene names: NA

Gene position: 3063291-3062944 (Counterclockwise)

Preceding gene: 218710830

Following gene: 218710826

Centisome position: 92.85

GC content: 39.94

Gene sequence:

>348_bases
ATGCCGAATCTAGTTCTAGAGTACTCAAATTCAGTGGATGAGCGAGTGAATATCCAAGGTTTACTGGAAGACCTTCATCA
AGTTACATTAAACTGTGGTTTGTTTGATGTACCTTCTGTGAAGTCTCGTTCACTACGCTGTCATAACTGGTTGGTCGGTG
ATGAAGAGGACAATGTAGATTTTGTTCATATTAGCTTCGAGTTACTTTCTGGACGTACTGAAGAACAGAAAAGAGAATTG
TCGCGTTTGTTAATGCAAACCTTACAAGAACAGGCAAGCCATATCCGTAGCCTAACGGTCAACATACGGGATATGGATAA
AAGTTGCTTTCAGAAAGTGATTAACTAG

Upstream 100 bases:

>100_bases
ATCAGTGATCCGGCAGACAGAATAATAGCTAACTTCTCGGATTTTTCATCGTTAGTTGCTATTAAGGGACAAACGATTGC
GTTAACAATAGGAAGTAATA

Downstream 100 bases:

>100_bases
CTAAAAATAATCAACTAACTAAAAGTGATTCACTAACTATTTGCTGCTAACTTTTTGGTAGCGTATTAATTTTTGAGTGT
TTTAAGATGTCGATGAAAGA

Product: 5-carboxymethyl-2-hydroxymuconate isomerase

Products: 5-carboxy-2-oxohept-3-enedioate

Alternate protein names: 5-Carboxymethyl-2-Hydroxymuconate Delta Isomerase; 5-Carboxymethyl-2-Hydroxymuconate Delta-Isomerase; 5-Carboxymethyl-2-Hydroxymuconate D-Isomerase

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MPNLVLEYSNSVDERVNIQGLLEDLHQVTLNCGLFDVPSVKSRSLRCHNWLVGDEEDNVDFVHISFELLSGRTEEQKREL
SRLLMQTLQEQASHIRSLTVNIRDMDKSCFQKVIN

Sequences:

>Translated_115_residues
MPNLVLEYSNSVDERVNIQGLLEDLHQVTLNCGLFDVPSVKSRSLRCHNWLVGDEEDNVDFVHISFELLSGRTEEQKREL
SRLLMQTLQEQASHIRSLTVNIRDMDKSCFQKVIN
>Mature_114_residues
PNLVLEYSNSVDERVNIQGLLEDLHQVTLNCGLFDVPSVKSRSLRCHNWLVGDEEDNVDFVHISFELLSGRTEEQKRELS
RLLMQTLQEQASHIRSLTVNIRDMDKSCFQKVIN

Specific function: Unknown

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.3.10

Molecular weight: Translated: 13314; Mature: 13183

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLVLEYSNSVDERVNIQGLLEDLHQVTLNCGLFDVPSVKSRSLRCHNWLVGDEEDNVD
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEE
FVHISFELLSGRTEEQKRELSRLLMQTLQEQASHIRSLTVNIRDMDKSCFQKVIN
EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
PNLVLEYSNSVDERVNIQGLLEDLHQVTLNCGLFDVPSVKSRSLRCHNWLVGDEEDNVD
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEE
FVHISFELLSGRTEEQKRELSRLLMQTLQEQASHIRSLTVNIRDMDKSCFQKVIN
EEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-carboxymethyl-2-hydroxymuconate

Specific reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA