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The map label for this gene is prkB [H]

Identifier: 218710771

GI number: 218710771

Start: 2998570

End: 2999439

Strand: Direct

Name: prkB [H]

Synonym: VS_2854

Alternate gene names: 218710771

Gene position: 2998570-2999439 (Clockwise)

Preceding gene: 218710770

Following gene: 218710772

Centisome position: 90.88

GC content: 47.24

Gene sequence:

>870_bases
ATGTCCGCTAAACATCCAATTATTGCGGTGACGGGTTCATCTGGAGCCGGCACCACCACTACCTCAGAAGCCTTCCGAAA
AATGTTCAATATGATGGACGTGAAGGCAGCTTGGGTTGAAGGGGATAGTTTCCATCGCTTCACTCGACCAGAGATGGATG
TCGAGATCCGTAAGGCCCGCGAGCAAGGTAAGCACATCAGCTACTTTGGTCCACAAGCTAACGATTTTGGTGCATTAGAA
GATTTCTTCCGTCAATACGGTAATGAAGGCACGGGAAAAGTCCGTAGCTATCTGCATACCTTCGATGAAGCCGTGCCTTA
CAATCAAATGCCCGGCACCTTTACGCCATGGCAAGAGATCCCTGAAAACTCGGATGTGATGTTCTACGAAGGTCTTCACG
GTGGCGTAGTCGATGGTGACATCAATGTTTCTCAACACGTCGATCTGCTTATCGGCATGGTACCTATCGTAAACTTGGAG
TGGATCCAGAAATTCGTTCGTGACACACGCGATCGTGGTCACTCTCGCGAAGCGGTGATGGATTCTATTGTTCGCTCAAT
GGATGATTACCTTAACTACATTACCCCGCAGTTTTCGCGTACTCATATCAACTTTCAGCGTGTCCCTACCGTAGATACAT
CAAATCCACTGAATGCAAAAGGGATCCCAAGTTTAGACGAAAGCTTCGTGGTCATACGTTTGCGCGGCATCAAAAACGTC
GATTTCCCTTACTTGTTGGCTATGATTGATGGCTCATTTATGTCACGTCATAACACACTTGTGGTGCCAGGAGGCAAGAT
GAGTTTTGCTATGGAGCTCATTGTAAGGCCTATCCTGCAACAACTTATAGAAACCGGGAAAATAGGCTAA

Upstream 100 bases:

>100_bases
TTCAAGTCACAAAACGCTTCTAAGCTGCGCTCATAAAGGAGCCGTGTTATAGTGGTAAACGATTGCTAACAAGTAAGTTA
CTCAAAAGACAAGGGTTGTC

Downstream 100 bases:

>100_bases
CAAAACAACATTCTGGTTGATTACTTTTCATACCGTGATCATGTGCACAATTTTGCGTAAAAAATCGTAGCTTGGTCACG
ATTAAAATCAAGAAATAGTA

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDVKAAWVEGDSFHRFTRPEMDVEIRKAREQGKHISYFGPQANDFGALE
DFFRQYGNEGTGKVRSYLHTFDEAVPYNQMPGTFTPWQEIPENSDVMFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLE
WIQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVRPILQQLIETGKIG

Sequences:

>Translated_289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDVKAAWVEGDSFHRFTRPEMDVEIRKAREQGKHISYFGPQANDFGALE
DFFRQYGNEGTGKVRSYLHTFDEAVPYNQMPGTFTPWQEIPENSDVMFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLE
WIQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVRPILQQLIETGKIG
>Mature_288_residues
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDVKAAWVEGDSFHRFTRPEMDVEIRKAREQGKHISYFGPQANDFGALED
FFRQYGNEGTGKVRSYLHTFDEAVPYNQMPGTFTPWQEIPENSDVMFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEW
IQKFVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNVD
FPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVRPILQQLIETGKIG

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=73.9583333333333, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 32617; Mature: 32485

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDVKAAWVEGDSFHRFTRPEMDVEIRKAR
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHH
EQGKHISYFGPQANDFGALEDFFRQYGNEGTGKVRSYLHTFDEAVPYNQMPGTFTPWQEI
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
PENSDVMFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQKFVRDTRDRGHSREAVM
CCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVRPILQQLIETGKIG
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMDVKAAWVEGDSFHRFTRPEMDVEIRKAR
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHH
EQGKHISYFGPQANDFGALEDFFRQYGNEGTGKVRSYLHTFDEAVPYNQMPGTFTPWQEI
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
PENSDVMFYEGLHGGVVDGDINVSQHVDLLIGMVPIVNLEWIQKFVRDTRDRGHSREAVM
CCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVRPILQQLIETGKIG
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]