| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yheU [C]
Identifier: 218710770
GI number: 218710770
Start: 2998280
End: 2998492
Strand: Direct
Name: yheU [C]
Synonym: VS_2853
Alternate gene names: 218710770
Gene position: 2998280-2998492 (Clockwise)
Preceding gene: 218710769
Following gene: 218710771
Centisome position: 90.88
GC content: 41.78
Gene sequence:
>213_bases ATGATCATCCCGTGGCAAGACATTGCGCCAGAGACACTGGAAAACCTCATCAAAGAATTCGTACTGCGTGAAGGTACAGA CTATGGTGACGTAGAAGTTTCACTGCAAAACAAAATTGACCAAGTGAAACATCAATTAGCCTCAGGAGAAGTGAGTATCG TGTTTTCTGAACTGCATGAAACCGTTGATATTCAAGTCACAAAACGCTTCTAA
Upstream 100 bases:
>100_bases CATAATGACGAGCCTTAGTAAATAGCAGTAAAAATATTACTAAGCTCACTCATTTCTACAACAATAAACCTATCCATGAA CATAAAAGAGAGAAGTATTT
Downstream 100 bases:
>100_bases GCTGCGCTCATAAAGGAGCCGTGTTATAGTGGTAAACGATTGCTAACAAGTAAGTTACTCAAAAGACAAGGGTTGTCATG TCCGCTAAACATCCAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MIIPWQDIAPETLENLIKEFVLREGTDYGDVEVSLQNKIDQVKHQLASGEVSIVFSELHETVDIQVTKRF
Sequences:
>Translated_70_residues MIIPWQDIAPETLENLIKEFVLREGTDYGDVEVSLQNKIDQVKHQLASGEVSIVFSELHETVDIQVTKRF >Mature_70_residues MIIPWQDIAPETLENLIKEFVLREGTDYGDVEVSLQNKIDQVKHQLASGEVSIVFSELHETVDIQVTKRF
Specific function: Unknown
COG id: COG3089
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0270 family
Homologues:
Organism=Escherichia coli, GI1789753, Length=70, Percent_Identity=61.4285714285714, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2853_VIBSL (B7VLH8)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002418391.1 - ProteinModelPortal: B7VLH8 - GeneID: 7162338 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2853 - HOGENOM: HBG678569 - OMA: MIIPWQD - ProtClustDB: PRK04966 - HAMAP: MF_00690 - InterPro: IPR010648 - Gene3D: G3DSA:1.10.10.610 - PIRSF: PIRSF006169 - ProDom: PD026997
Pfam domain/function: PF06794 UPF0270
EC number: NA
Molecular weight: Translated: 8041; Mature: 8041
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPWQDIAPETLENLIKEFVLREGTDYGDVEVSLQNKIDQVKHQLASGEVSIVFSELHE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHH TVDIQVTKRF HEEEEEEECC >Mature Secondary Structure MIIPWQDIAPETLENLIKEFVLREGTDYGDVEVSLQNKIDQVKHQLASGEVSIVFSELHE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCEEHHHHHHH TVDIQVTKRF HEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA