| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
Click here to switch to the map view.
The map label for this gene is yheT [H]
Identifier: 218710769
GI number: 218710769
Start: 2997192
End: 2998184
Strand: Direct
Name: yheT [H]
Synonym: VS_2852
Alternate gene names: 218710769
Gene position: 2997192-2998184 (Clockwise)
Preceding gene: 218710768
Following gene: 218710770
Centisome position: 90.84
GC content: 45.92
Gene sequence:
>993_bases ATGACAATATTTACCGCTGCCGCTGGCCTATCGAATCCACATTTACAAACCTTAGTGCCAAGATTTATTAGAAAGCAGGC GTTGTTTGCTCCTCAATGGCAGACCTTAGAAACTCCCGACGGCGATTTCCTAGACCTTGCATGGAGTGAATCGCCAGACG GTGACACGCCAAGCAATGATGATAAAAGTAACAAGCCAATATTCGTTCTATTCCACGGATTAGAAGGGAGCTTTGAGAGC CCTTACGCCAACGGGCTGATGAATGCATTTGCTAAAGATGGTTGGCTATCAGTGATGATGCACTTTAGAGGTTGCAGCGG AAAACCAAATCGCTTGGCTCGTGCATACCATTCAGGTGAAGTCGAAGATGCGCGCTTTTTCCTAAGGCATCTGCACGCGC AGTTCCCCAACAACCCCAAAGTTGCAGTTGGTATCTCTTTGGGTGGTAACATGCTGGCGAATTATTTGGCTGAGTATGCA GACGACCCATTGCTGTCGGCGGCGACCATAGTATCTGCTCCATTTGACTTGGCTTGTTGTTCTAGTCGCATTGAGCAGGG CTTCTCCAAGCTCTATAAGAAGTATCTACTCAACTCTCTAAAATCAAACGCCTTGAAAAAAGTTAACCTGCTACAGGAAA AGCTGGGGGTCACAGCGGAAACCATTAAGAAGATCACCAAACTGTATGAGTTTGATGAACAAATCACGGCGCCTCTGCAT GGGTTCAAAAATGCCCAAGATTATTATGCGCAATGCTCCGCACTGCCTAAACTCAAGAAGATCAAACTACCAACTCAGAT CATTCATGCCAAGGACGATCCTTTCATGACCGATGATGTGATTCCAAAGTTCGTTCTGCCTGATAACATCGATTATCGAC TGTTTCAAAAAGGCGGTCATGTGGGGTTCATTACCGGCAGCACACTCAAGCCAAGATTTTGGTTAGAAGAAGCATTACCC GCCTACTATGAAAGTCTACAAGATTCGGCATAA
Upstream 100 bases:
>100_bases GCTTATGCTAAGAATCAACCAAGCTCAAATAAAAACGTGGGCGTTTCGCTAAAAGCTCAACACTTTATCAAAGCCCATAA AAGAAGCATGGACTGTTTTT
Downstream 100 bases:
>100_bases TGACGAGCCTTAGTAAATAGCAGTAAAAATATTACTAAGCTCACTCATTTCTACAACAATAAACCTATCCATGAACATAA AAGAGAGAAGTATTTATGAT
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTIFTAAAGLSNPHLQTLVPRFIRKQALFAPQWQTLETPDGDFLDLAWSESPDGDTPSNDDKSNKPIFVLFHGLEGSFES PYANGLMNAFAKDGWLSVMMHFRGCSGKPNRLARAYHSGEVEDARFFLRHLHAQFPNNPKVAVGISLGGNMLANYLAEYA DDPLLSAATIVSAPFDLACCSSRIEQGFSKLYKKYLLNSLKSNALKKVNLLQEKLGVTAETIKKITKLYEFDEQITAPLH GFKNAQDYYAQCSALPKLKKIKLPTQIIHAKDDPFMTDDVIPKFVLPDNIDYRLFQKGGHVGFITGSTLKPRFWLEEALP AYYESLQDSA
Sequences:
>Translated_330_residues MTIFTAAAGLSNPHLQTLVPRFIRKQALFAPQWQTLETPDGDFLDLAWSESPDGDTPSNDDKSNKPIFVLFHGLEGSFES PYANGLMNAFAKDGWLSVMMHFRGCSGKPNRLARAYHSGEVEDARFFLRHLHAQFPNNPKVAVGISLGGNMLANYLAEYA DDPLLSAATIVSAPFDLACCSSRIEQGFSKLYKKYLLNSLKSNALKKVNLLQEKLGVTAETIKKITKLYEFDEQITAPLH GFKNAQDYYAQCSALPKLKKIKLPTQIIHAKDDPFMTDDVIPKFVLPDNIDYRLFQKGGHVGFITGSTLKPRFWLEEALP AYYESLQDSA >Mature_329_residues TIFTAAAGLSNPHLQTLVPRFIRKQALFAPQWQTLETPDGDFLDLAWSESPDGDTPSNDDKSNKPIFVLFHGLEGSFESP YANGLMNAFAKDGWLSVMMHFRGCSGKPNRLARAYHSGEVEDARFFLRHLHAQFPNNPKVAVGISLGGNMLANYLAEYAD DPLLSAATIVSAPFDLACCSSRIEQGFSKLYKKYLLNSLKSNALKKVNLLQEKLGVTAETIKKITKLYEFDEQITAPLHG FKNAQDYYAQCSALPKLKKIKLPTQIIHAKDDPFMTDDVIPKFVLPDNIDYRLFQKGGHVGFITGSTLKPRFWLEEALPA YYESLQDSA
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI194578891, Length=315, Percent_Identity=27.6190476190476, Blast_Score=136, Evalue=3e-32, Organism=Homo sapiens, GI23397663, Length=316, Percent_Identity=25.6329113924051, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI23397659, Length=290, Percent_Identity=22.7586206896552, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI23397661, Length=290, Percent_Identity=22.7586206896552, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1789752, Length=320, Percent_Identity=53.75, Blast_Score=353, Evalue=9e-99, Organism=Caenorhabditis elegans, GI17566110, Length=312, Percent_Identity=27.8846153846154, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71985405, Length=313, Percent_Identity=27.7955271565495, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71985413, Length=171, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323866, Length=286, Percent_Identity=29.020979020979, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6325162, Length=269, Percent_Identity=31.2267657992565, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319655, Length=267, Percent_Identity=30.3370786516854, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI24652003, Length=302, Percent_Identity=28.476821192053, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI281398151, Length=302, Percent_Identity=28.476821192053, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24581365, Length=270, Percent_Identity=26.6666666666667, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 36859; Mature: 36728
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFTAAAGLSNPHLQTLVPRFIRKQALFAPQWQTLETPDGDFLDLAWSESPDGDTPSND CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DKSNKPIFVLFHGLEGSFESPYANGLMNAFAKDGWLSVMMHFRGCSGKPNRLARAYHSGE CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCC VEDARFFLRHLHAQFPNNPKVAVGISLGGNMLANYLAEYADDPLLSAATIVSAPFDLACC HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH SSRIEQGFSKLYKKYLLNSLKSNALKKVNLLQEKLGVTAETIKKITKLYEFDEQITAPLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GFKNAQDYYAQCSALPKLKKIKLPTQIIHAKDDPFMTDDVIPKFVLPDNIDYRLFQKGGH HCCCHHHHHHHHHHCCCHHHHCCCHHHEECCCCCCCCHHCCCCEECCCCCCHHHHHCCCC VGFITGSTLKPRFWLEEALPAYYESLQDSA EEEEECCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIFTAAAGLSNPHLQTLVPRFIRKQALFAPQWQTLETPDGDFLDLAWSESPDGDTPSND EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC DKSNKPIFVLFHGLEGSFESPYANGLMNAFAKDGWLSVMMHFRGCSGKPNRLARAYHSGE CCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCC VEDARFFLRHLHAQFPNNPKVAVGISLGGNMLANYLAEYADDPLLSAATIVSAPFDLACC HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHH SSRIEQGFSKLYKKYLLNSLKSNALKKVNLLQEKLGVTAETIKKITKLYEFDEQITAPLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GFKNAQDYYAQCSALPKLKKIKLPTQIIHAKDDPFMTDDVIPKFVLPDNIDYRLFQKGGH HCCCHHHHHHHHHHCCCHHHHCCCHHHEECCCCCCCCHHCCCCEECCCCCCHHHHHCCCC VGFITGSTLKPRFWLEEALPAYYESLQDSA EEEEECCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]