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The map label for this gene is yfbS [C]

Identifier: 218710704

GI number: 218710704

Start: 2949628

End: 2951352

Strand: Reverse

Name: yfbS [C]

Synonym: VS_2787

Alternate gene names: 218710704

Gene position: 2951352-2949628 (Counterclockwise)

Preceding gene: 218710705

Following gene: 218710703

Centisome position: 89.45

GC content: 46.61

Gene sequence:

>1725_bases
ATGTGGCAACAAGGATTTGTATTAGCGATTTTGCTCGGCATCATTACTTGCCTGCTCGTTACCCGTATTAAGCCAAGCTT
TATCTTTGCTGGCGCGGCTTTTATTGCTTTTATGGCTGGTATGATCGACTTGTCGAGCCTAGCCAATAACTTCACTAACT
CCTCGTTACTGACTTTAATTCTTCTTATCCTCGCATCAAGTGCGTTGGAGAAAACTCGCTTAATCAGTTGGGTTAGCCGT
AATATCTCTGAAGGTAGGCTAGGTACCGTGGTTGCGAAGTTGGGTATTTCCACAGCGTTACTTTCTTCTTTTACTAATAA
CACGGCGGTGGTTGTTTCTTTGATCGGGGCGATCAAACGTAATCAACAACATGCGCCATCTAAACTGCTTATCCCTTTGT
CATACGCTGCCATCTTAGGTGGAACCCTGACATTGATCGGCACTTCAACCAACTTGATCATCAATAGTTTCGTTGAAGAT
GCGGGTTTGCCGAGCTTAAACTTTTTCACACCGACCTTGATCGGTTTAGCTGTTTTGGTCGGTGGTGTTTTGATCCTTAT
CCCTCTGAGTTACTTCTTACCAAGCTACGATGATGGATCGCAGGACGATCTGCCTTACTTTTTAGAGGCGCGAGTTGAAC
CTGGCTCACCGTTAGTTGGCCGCAGTGTTAGCGAAAATAATCTCAGAGCTTTGAGAAAATTGTTCTTAGCCGAAGTGATT
CGCGACGGTAAGACCACGGCTTCGATTGACCCTGATTTTATTCTTCAAGCTCGTGACCGGTTGCTGTTTTGTGGCGACGT
TGAAAGCGTAGCGACACTACAAGAAATTCAAGGGTTGACCCTGTTTGGCCAGCATCACCTTAACGGCCAGAGCTTTGTTG
AAGTGGTGGTGAGTTCGTCGGCAAGCTTCTGTAATAAAACCCTCAAAACCAGCCAGTTTAGAGACCGTTTCGATGCAGTT
GTAGTTGCTATTCGTCGTGGCCATGAGCGCCTTGAAGGTGGGCTAGGGAATATCACATTGACCGCTGGTGATACCTTGAT
TTTGGTTCCCGGTAAACGCTTTGAAGAACAGCGCCAGCAACACAACAAAGAGTTTGTGTTGATGAATGACTTGGACTCGA
GTGCCAAGCTTGATGCCGATAAATCGACGTTTGTATTGCTCGGTTTTGCCAGTGTGATTGGTCTAGCCCTTGCTGAAGTC
GTGCCGATTATCAAAGGGCTGGCTGGTTTCTTACTGTTGCTGGTGGCCTTTGGTGTGGTGCAACTGGGTGAACTCCGTCG
CCGTTTTCCGGTTGATATTGTGGTGATCGTTGGCTCCGCTCTGTCTATTGCTCAACTGATGATTTCATCTGGGCTGTCTG
AGCGTATGGGGCTGATGTTTATGGAAGCCTTTAATGGCTGGGGCGTGTTTGGTGCGTTAGTCGCGACCTATTTTATGACC
TTGGTTCTAACAGAACTGGTTACTAATAATGCGGCCGCAGCACTCTCTTTCCCAATCGGCTATAGCATGGCTATCGGCTA
TGGCGTTGACCCTATGCCATTCATTATGGCGGTTCTATTTGGTGCCAGTGCCAGTTTTATTTCGCCATACGGCTACCAAA
CTAATTTACTTGTTTATAGCGTAGGTAATTACCATCTCACGGATTATCTACGTATCGGCATCCCAATCTCGATTGTCTAT
TCGGGCTTGGTGCTGACCCTGATTCCTTACTTTTTCCCATTTTAA

Upstream 100 bases:

>100_bases
ATGCCAAAGATCTAAGCCAACTACTGAAGTCATAAACGACCAAGTAACAGCTTATTGAATCAGGCGGAAACCGATTGTTT
CCGCCATAAAGGACGGGTAT

Downstream 100 bases:

>100_bases
TGCTGTTTATTTAAAGGACTAATTATGACCGCAGTACTCAAACCAAAAGATGAGAATGTTGTGTGGCATCAACATTCGAT
TGATAAAACATTTCGTGCGG

Product: putative sodium/sulfate symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MWQQGFVLAILLGIITCLLVTRIKPSFIFAGAAFIAFMAGMIDLSSLANNFTNSSLLTLILLILASSALEKTRLISWVSR
NISEGRLGTVVAKLGISTALLSSFTNNTAVVVSLIGAIKRNQQHAPSKLLIPLSYAAILGGTLTLIGTSTNLIINSFVED
AGLPSLNFFTPTLIGLAVLVGGVLILIPLSYFLPSYDDGSQDDLPYFLEARVEPGSPLVGRSVSENNLRALRKLFLAEVI
RDGKTTASIDPDFILQARDRLLFCGDVESVATLQEIQGLTLFGQHHLNGQSFVEVVVSSSASFCNKTLKTSQFRDRFDAV
VVAIRRGHERLEGGLGNITLTAGDTLILVPGKRFEEQRQQHNKEFVLMNDLDSSAKLDADKSTFVLLGFASVIGLALAEV
VPIIKGLAGFLLLLVAFGVVQLGELRRRFPVDIVVIVGSALSIAQLMISSGLSERMGLMFMEAFNGWGVFGALVATYFMT
LVLTELVTNNAAAALSFPIGYSMAIGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYSVGNYHLTDYLRIGIPISIVY
SGLVLTLIPYFFPF

Sequences:

>Translated_574_residues
MWQQGFVLAILLGIITCLLVTRIKPSFIFAGAAFIAFMAGMIDLSSLANNFTNSSLLTLILLILASSALEKTRLISWVSR
NISEGRLGTVVAKLGISTALLSSFTNNTAVVVSLIGAIKRNQQHAPSKLLIPLSYAAILGGTLTLIGTSTNLIINSFVED
AGLPSLNFFTPTLIGLAVLVGGVLILIPLSYFLPSYDDGSQDDLPYFLEARVEPGSPLVGRSVSENNLRALRKLFLAEVI
RDGKTTASIDPDFILQARDRLLFCGDVESVATLQEIQGLTLFGQHHLNGQSFVEVVVSSSASFCNKTLKTSQFRDRFDAV
VVAIRRGHERLEGGLGNITLTAGDTLILVPGKRFEEQRQQHNKEFVLMNDLDSSAKLDADKSTFVLLGFASVIGLALAEV
VPIIKGLAGFLLLLVAFGVVQLGELRRRFPVDIVVIVGSALSIAQLMISSGLSERMGLMFMEAFNGWGVFGALVATYFMT
LVLTELVTNNAAAALSFPIGYSMAIGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYSVGNYHLTDYLRIGIPISIVY
SGLVLTLIPYFFPF
>Mature_574_residues
MWQQGFVLAILLGIITCLLVTRIKPSFIFAGAAFIAFMAGMIDLSSLANNFTNSSLLTLILLILASSALEKTRLISWVSR
NISEGRLGTVVAKLGISTALLSSFTNNTAVVVSLIGAIKRNQQHAPSKLLIPLSYAAILGGTLTLIGTSTNLIINSFVED
AGLPSLNFFTPTLIGLAVLVGGVLILIPLSYFLPSYDDGSQDDLPYFLEARVEPGSPLVGRSVSENNLRALRKLFLAEVI
RDGKTTASIDPDFILQARDRLLFCGDVESVATLQEIQGLTLFGQHHLNGQSFVEVVVSSSASFCNKTLKTSQFRDRFDAV
VVAIRRGHERLEGGLGNITLTAGDTLILVPGKRFEEQRQQHNKEFVLMNDLDSSAKLDADKSTFVLLGFASVIGLALAEV
VPIIKGLAGFLLLLVAFGVVQLGELRRRFPVDIVVIVGSALSIAQLMISSGLSERMGLMFMEAFNGWGVFGALVATYFMT
LVLTELVTNNAAAALSFPIGYSMAIGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYSVGNYHLTDYLRIGIPISIVY
SGLVLTLIPYFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=583, Percent_Identity=24.8713550600343, Blast_Score=149, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17551790, Length=134, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 61923; Mature: 61923

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQQGFVLAILLGIITCLLVTRIKPSFIFAGAAFIAFMAGMIDLSSLANNFTNSSLLTLI
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLILASSALEKTRLISWVSRNISEGRLGTVVAKLGISTALLSSFTNNTAVVVSLIGAIKR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NQQHAPSKLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDAGLPSLNFFTPTLIGLAVLV
CCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GGVLILIPLSYFLPSYDDGSQDDLPYFLEARVEPGSPLVGRSVSENNLRALRKLFLAEVI
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RDGKTTASIDPDFILQARDRLLFCGDVESVATLQEIQGLTLFGQHHLNGQSFVEVVVSSS
HCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCC
ASFCNKTLKTSQFRDRFDAVVVAIRRGHERLEGGLGNITLTAGDTLILVPGKRFEEQRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHH
HNKEFVLMNDLDSSAKLDADKSTFVLLGFASVIGLALAEVVPIIKGLAGFLLLLVAFGVV
CCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGELRRRFPVDIVVIVGSALSIAQLMISSGLSERMGLMFMEAFNGWGVFGALVATYFMT
HHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVLTELVTNNAAAALSFPIGYSMAIGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYS
HHHHHHHHCCCCCEEECCCCHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
VGNYHLTDYLRIGIPISIVYSGLVLTLIPYFFPF
CCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWQQGFVLAILLGIITCLLVTRIKPSFIFAGAAFIAFMAGMIDLSSLANNFTNSSLLTLI
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLILASSALEKTRLISWVSRNISEGRLGTVVAKLGISTALLSSFTNNTAVVVSLIGAIKR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
NQQHAPSKLLIPLSYAAILGGTLTLIGTSTNLIINSFVEDAGLPSLNFFTPTLIGLAVLV
CCCCCCCEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
GGVLILIPLSYFLPSYDDGSQDDLPYFLEARVEPGSPLVGRSVSENNLRALRKLFLAEVI
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
RDGKTTASIDPDFILQARDRLLFCGDVESVATLQEIQGLTLFGQHHLNGQSFVEVVVSSS
HCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCC
ASFCNKTLKTSQFRDRFDAVVVAIRRGHERLEGGLGNITLTAGDTLILVPGKRFEEQRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHH
HNKEFVLMNDLDSSAKLDADKSTFVLLGFASVIGLALAEVVPIIKGLAGFLLLLVAFGVV
CCCCEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGELRRRFPVDIVVIVGSALSIAQLMISSGLSERMGLMFMEAFNGWGVFGALVATYFMT
HHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVLTELVTNNAAAALSFPIGYSMAIGYGVDPMPFIMAVLFGASASFISPYGYQTNLLVYS
HHHHHHHHCCCCCEEECCCCHHEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
VGNYHLTDYLRIGIPISIVYSGLVLTLIPYFFPF
CCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]