| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cysN
Identifier: 218710705
GI number: 218710705
Start: 2951418
End: 2952848
Strand: Reverse
Name: cysN
Synonym: VS_2788
Alternate gene names: 218710705
Gene position: 2952848-2951418 (Counterclockwise)
Preceding gene: 218710706
Following gene: 218710704
Centisome position: 89.5
GC content: 47.73
Gene sequence:
>1431_bases ATGAATAGTGCAGTAGAAGCCGAATTGGCTGAACTAGGGATTGAAGGTTATCTAAGTCAGCATCAGCATAAATCTATGCT TAGATTTTTAACTTGTGGCTCGGTAGATGATGGTAAAAGTACGCTGATCGGTCGCTTGCTCCATGATACAAAACAGATTT ATGAAGATCAGCTAGCAGCGGTTCACTCGGATAGCCAACGAGTGGGTACCACAGGTGAGAAGCCTGATTTGGCACTGCTT GTTGATGGCTTGCAGGCTGAACGTGAGCAAGGCATCACGATCGATGTGGCTTACCGCTACTTCTCGACGCAAAAACGTAA GTTCATTATTGCTGATACTCCAGGGCATGAGCAGTACACGCGCAACATGGCGACAGGCGCTTCAACGTGTGATCTGGCTG TGATCTTGATTGATGCTCGTAAGGGCGTTCTGGATCAAACACGTCGTCACTCGTTTATCTCTAACCTGCTTGGTTTGAAG CATTTCATTGTTGCTGTAAACAAGATGGATCTGGTGGATTACTCGCAAGATCGTTTTGAAGAGATTCGCGATCAGTATCT AGAGTTTGCAGAAAACCTAGAAGGCGAAACTAACATTCAGATCCTGCCAGTATCGGCGCTTGAAGGCATCAACGTTGCTG CACCAAGTAAAGAGCTTGCATGGTTCGAAGGCCCATCTCTGCTAGAAGTGCTAGAGAACGTCGATATCGATCAAAAGCGT TCTGCAGGTGAATTCCGATTCCCAGTGCAGTATGTGAATCGTCCGAACTTAGACTTCCGTGGCTTTGCTGGCACCGTTGC CTCTGGCCGTGTGAGTGTTGGTGATGAAATCAAGGCGCTGCCGTCAGGTAAAACGTCGAAAGTTGCACGCATTGTAACTT TTGATGGTGATTTGGAGTCTGCACAAGCGGGCTTGGCGGTAACGCTAACCCTTGAAGATGAGATTGATATCAGCCGTGGT GATTTAATTGTGCTAGAAAACGCGCAGATTGAATCCACTAACCACGTATTGGCTGACATCGTGTGGATGACAGAGCAACC ATTGCAACCGGGCAAAGCTTACGACATCAAGATCGCAGGCAAGAAAACCGTTGGCCAGGTTGAAACAGTTCGTCACCAAT ACGACATCAACAACCTATCGACTCACGCTGTCGATGAGTTGCCACTGAATGGCATTGGCTTGTGTGAATGGTCACTGAAC GAGACTGTCGCGCTGGATAAATACCGTGAGAGTGCCGATACCGGTGGTTTCATCGTTATCGACCGACTAACCAACGTGAC GGTTGGCGCGGGTTTGATTCGAGACCGTTTGGACTCTGTTGAACAGCAAGTCGGTAACTTCTCTGCATTTGAACTTGAGT TCAACGCATTGGTACGCAAGCACTTCCCTCATTGGGATGCCAAAGATCTAAGCCAACTACTGAAGTCATAA
Upstream 100 bases:
>100_bases GTCTAGTGAGCGTCAAGGTCGAGCGATTGACCATGATCAGTCGGGCTCTATGGAGCTGAAAAAGCGCCAAGGTTATTTCT AAGAATCTAAGGAAAGAAAA
Downstream 100 bases:
>100_bases ACGACCAAGTAACAGCTTATTGAATCAGGCGGAAACCGATTGTTTCCGCCATAAAGGACGGGTATATGTGGCAACAAGGA TTTGTATTAGCGATTTTGCT
Product: sulfate adenylyltransferase subunit 1
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MNSAVEAELAELGIEGYLSQHQHKSMLRFLTCGSVDDGKSTLIGRLLHDTKQIYEDQLAAVHSDSQRVGTTGEKPDLALL VDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLDQTRRHSFISNLLGLK HFIVAVNKMDLVDYSQDRFEEIRDQYLEFAENLEGETNIQILPVSALEGINVAAPSKELAWFEGPSLLEVLENVDIDQKR SAGEFRFPVQYVNRPNLDFRGFAGTVASGRVSVGDEIKALPSGKTSKVARIVTFDGDLESAQAGLAVTLTLEDEIDISRG DLIVLENAQIESTNHVLADIVWMTEQPLQPGKAYDIKIAGKKTVGQVETVRHQYDINNLSTHAVDELPLNGIGLCEWSLN ETVALDKYRESADTGGFIVIDRLTNVTVGAGLIRDRLDSVEQQVGNFSAFELEFNALVRKHFPHWDAKDLSQLLKS
Sequences:
>Translated_476_residues MNSAVEAELAELGIEGYLSQHQHKSMLRFLTCGSVDDGKSTLIGRLLHDTKQIYEDQLAAVHSDSQRVGTTGEKPDLALL VDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLDQTRRHSFISNLLGLK HFIVAVNKMDLVDYSQDRFEEIRDQYLEFAENLEGETNIQILPVSALEGINVAAPSKELAWFEGPSLLEVLENVDIDQKR SAGEFRFPVQYVNRPNLDFRGFAGTVASGRVSVGDEIKALPSGKTSKVARIVTFDGDLESAQAGLAVTLTLEDEIDISRG DLIVLENAQIESTNHVLADIVWMTEQPLQPGKAYDIKIAGKKTVGQVETVRHQYDINNLSTHAVDELPLNGIGLCEWSLN ETVALDKYRESADTGGFIVIDRLTNVTVGAGLIRDRLDSVEQQVGNFSAFELEFNALVRKHFPHWDAKDLSQLLKS >Mature_476_residues MNSAVEAELAELGIEGYLSQHQHKSMLRFLTCGSVDDGKSTLIGRLLHDTKQIYEDQLAAVHSDSQRVGTTGEKPDLALL VDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARKGVLDQTRRHSFISNLLGLK HFIVAVNKMDLVDYSQDRFEEIRDQYLEFAENLEGETNIQILPVSALEGINVAAPSKELAWFEGPSLLEVLENVDIDQKR SAGEFRFPVQYVNRPNLDFRGFAGTVASGRVSVGDEIKALPSGKTSKVARIVTFDGDLESAQAGLAVTLTLEDEIDISRG DLIVLENAQIESTNHVLADIVWMTEQPLQPGKAYDIKIAGKKTVGQVETVRHQYDINNLSTHAVDELPLNGIGLCEWSLN ETVALDKYRESADTGGFIVIDRLTNVTVGAGLIRDRLDSVEQQVGNFSAFELEFNALVRKHFPHWDAKDLSQLLKS
Specific function: May be the GTPase, regulating ATP sulfurylase activity
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily
Homologues:
Organism=Homo sapiens, GI223555963, Length=431, Percent_Identity=29.0023201856148, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI5729864, Length=431, Percent_Identity=29.0023201856148, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI194018522, Length=324, Percent_Identity=29.6296296296296, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI194018520, Length=324, Percent_Identity=29.6296296296296, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI194097354, Length=324, Percent_Identity=29.6296296296296, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI4503471, Length=275, Percent_Identity=32.3636363636364, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI4503475, Length=275, Percent_Identity=32, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI46094014, Length=293, Percent_Identity=29.3515358361775, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI34147630, Length=348, Percent_Identity=28.448275862069, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI157426893, Length=379, Percent_Identity=22.4274406332454, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789108, Length=471, Percent_Identity=65.8174097664543, Blast_Score=651, Evalue=0.0, Organism=Escherichia coli, GI2367247, Length=292, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1789737, Length=141, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790412, Length=141, Percent_Identity=29.7872340425532, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532067, Length=311, Percent_Identity=31.5112540192926, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI115532065, Length=311, Percent_Identity=31.5112540192926, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI32566629, Length=340, Percent_Identity=30.8823529411765, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17552884, Length=275, Percent_Identity=32.3636363636364, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17569207, Length=275, Percent_Identity=32.3636363636364, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32566303, Length=268, Percent_Identity=29.8507462686567, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI32566301, Length=149, Percent_Identity=34.2281879194631, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25141371, Length=230, Percent_Identity=26.0869565217391, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17556456, Length=346, Percent_Identity=27.4566473988439, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322937, Length=374, Percent_Identity=30.4812834224599, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6325337, Length=328, Percent_Identity=28.9634146341463, Blast_Score=136, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6319594, Length=328, Percent_Identity=28.9634146341463, Blast_Score=136, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320377, Length=335, Percent_Identity=28.955223880597, Blast_Score=120, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=234, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323320, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI45553807, Length=275, Percent_Identity=32.7272727272727, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI45553816, Length=275, Percent_Identity=32.7272727272727, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24651721, Length=275, Percent_Identity=32.7272727272727, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI17864154, Length=275, Percent_Identity=32.7272727272727, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI45550900, Length=430, Percent_Identity=26.046511627907, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24652838, Length=275, Percent_Identity=32, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17137572, Length=275, Percent_Identity=32, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI17137380, Length=343, Percent_Identity=27.9883381924198, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI281363316, Length=332, Percent_Identity=27.1084337349398, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI17864358, Length=332, Percent_Identity=27.1084337349398, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI19921738, Length=320, Percent_Identity=28.75, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI19922690, Length=234, Percent_Identity=29.0598290598291, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSN_VIBSL (B7VKY2)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002418326.1 - GeneID: 7162274 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_2788 - HOGENOM: HBG307581 - OMA: SAQIYED - ProtClustDB: PRK05124 - HAMAP: MF_00062 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 - PRINTS: PR00315 - TIGRFAMs: TIGR02034 - TIGRFAMs: TIGR00231
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: =2.7.7.4
Molecular weight: Translated: 52730; Mature: 52730
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSAVEAELAELGIEGYLSQHQHKSMLRFLTCGSVDDGKSTLIGRLLHDTKQIYEDQLAA CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYT HCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCHHHH RNMATGASTCDLAVILIDARKGVLDQTRRHSFISNLLGLKHFIVAVNKMDLVDYSQDRFE HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH EIRDQYLEFAENLEGETNIQILPVSALEGINVAAPSKELAWFEGPSLLEVLENVDIDQKR HHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCC SAGEFRFPVQYVNRPNLDFRGFAGTVASGRVSVGDEIKALPSGKTSKVARIVTFDGDLES CCCCEECCHHHCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCCCEEEEEEECCCCCC AQAGLAVTLTLEDEIDISRGDLIVLENAQIESTNHVLADIVWMTEQPLQPGKAYDIKIAG CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCCCCCCCCEEEEEECC KKTVGQVETVRHQYDINNLSTHAVDELPLNGIGLCEWSLNETVALDKYRESADTGGFIVI CCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEEHHHHHHCCCCCCEEEE DRLTNVTVGAGLIRDRLDSVEQQVGNFSAFELEFNALVRKHFPHWDAKDLSQLLKS ECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure MNSAVEAELAELGIEGYLSQHQHKSMLRFLTCGSVDDGKSTLIGRLLHDTKQIYEDQLAA CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VHSDSQRVGTTGEKPDLALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYT HCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCCHHHH RNMATGASTCDLAVILIDARKGVLDQTRRHSFISNLLGLKHFIVAVNKMDLVDYSQDRFE HHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH EIRDQYLEFAENLEGETNIQILPVSALEGINVAAPSKELAWFEGPSLLEVLENVDIDQKR HHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCC SAGEFRFPVQYVNRPNLDFRGFAGTVASGRVSVGDEIKALPSGKTSKVARIVTFDGDLES CCCCEECCHHHCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCCCCCCEEEEEEECCCCCC AQAGLAVTLTLEDEIDISRGDLIVLENAQIESTNHVLADIVWMTEQPLQPGKAYDIKIAG CCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCCCCCCCCEEEEEECC KKTVGQVETVRHQYDINNLSTHAVDELPLNGIGLCEWSLNETVALDKYRESADTGGFIVI CCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCEEEHHHHHHCCCCCCEEEE DRLTNVTVGAGLIRDRLDSVEQQVGNFSAFELEFNALVRKHFPHWDAKDLSQLLKS ECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA