Click here to switch to the map view.

The map label for this gene is ytfJ [H]

Identifier: 218710696

GI number: 218710696

Start: 2943115

End: 2943666

Strand: Direct

Name: ytfJ [H]

Synonym: VS_2779

Alternate gene names: 218710696

Gene position: 2943115-2943666 (Clockwise)

Preceding gene: 218710695

Following gene: 218710697

Centisome position: 89.2

GC content: 43.12

Gene sequence:

>552_bases
ATGAAAAACAAAACTCTACTGGCTTTTTTAGCCGCAGCCTCTCCACTTTTCGCCAATGCTCATAATCTATCAGTCGGTGC
AACTCTGCCTGCTGTCGATGTTAGCAACTATGGTGAAATCGTACTAAACGACGGAAATACTGGATATCAAGCTTGGGCAA
CCAATGATCTTCTAGGTAAAGTTCGCGTCGTTCAAGCTATTGCTGGCCGTAGCAGCTCGAAAGAGCTCAACGCACAACTG
ATGGCAGCAATTACAGCATCGAAATTCGCAGAAGACAGCTACCAAACCACTACCATCATCAACCAAGATGATGCGATTTG
GGGAACTGGGTCTTTTGTTAAATCGTCAGCAGAAAGTAGCAAAGAAGAATTTCCATGGTCTTCTATGGTGCTAGATGAAG
ACGGAACCGTAGCGTCATCATGGGCTTTAAAAGAAGAGAGCTCAGCGATTATCGTTCAAGACAAGCAAGGTAAAATATTG
TTTGTTAAAGAAGGGGCATTAAACGACTCAGAAGTCACTCAAGTTATTGAGTTGATTAAAGCGAGCCTTTAA

Upstream 100 bases:

>100_bases
GCAACTTATTTCTACGCCGTACGATAAAAAAGTTAAAGAGGCATTTTTCAAATTTCATATTATACTTCCAGAGCAAACCA
ATAAGCGGAACAAAAATATA

Downstream 100 bases:

>100_bases
TAAGATATTCGCGTCTTTTTCGAGACCTGACCAAAGGATATTGTTATATTATAACAGTATCCTTTTTTAATTCTGTGGTT
AATCATCCTGATGTGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNKTLLAFLAAASPLFANAHNLSVGATLPAVDVSNYGEIVLNDGNTGYQAWATNDLLGKVRVVQAIAGRSSSKELNAQL
MAAITASKFAEDSYQTTTIINQDDAIWGTGSFVKSSAESSKEEFPWSSMVLDEDGTVASSWALKEESSAIIVQDKQGKIL
FVKEGALNDSEVTQVIELIKASL

Sequences:

>Translated_183_residues
MKNKTLLAFLAAASPLFANAHNLSVGATLPAVDVSNYGEIVLNDGNTGYQAWATNDLLGKVRVVQAIAGRSSSKELNAQL
MAAITASKFAEDSYQTTTIINQDDAIWGTGSFVKSSAESSKEEFPWSSMVLDEDGTVASSWALKEESSAIIVQDKQGKIL
FVKEGALNDSEVTQVIELIKASL
>Mature_183_residues
MKNKTLLAFLAAASPLFANAHNLSVGATLPAVDVSNYGEIVLNDGNTGYQAWATNDLLGKVRVVQAIAGRSSSKELNAQL
MAAITASKFAEDSYQTTTIINQDDAIWGTGSFVKSSAESSKEEFPWSSMVLDEDGTVASSWALKEESSAIIVQDKQGKIL
FVKEGALNDSEVTQVIELIKASL

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0045 [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=183, Percent_Identity=44.8087431693989, Blast_Score=177, Evalue=5e-46,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 19505; Mature: 19505

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKTLLAFLAAASPLFANAHNLSVGATLPAVDVSNYGEIVLNDGNTGYQAWATNDLLGK
CCCCEEEEEEECCCCHHCCCCCCEECCCCCEEECCCCCCEEEECCCCCEEEEECCHHHHH
VRVVQAIAGRSSSKELNAQLMAAITASKFAEDSYQTTTIINQDDAIWGTGSFVKSSAESS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCHHHHHHHHHH
KEEFPWSSMVLDEDGTVASSWALKEESSAIIVQDKQGKILFVKEGALNDSEVTQVIELIK
HHHCCCCCEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
ASL
HCC
>Mature Secondary Structure
MKNKTLLAFLAAASPLFANAHNLSVGATLPAVDVSNYGEIVLNDGNTGYQAWATNDLLGK
CCCCEEEEEEECCCCHHCCCCCCEECCCCCEEECCCCCCEEEECCCCCEEEEECCHHHHH
VRVVQAIAGRSSSKELNAQLMAAITASKFAEDSYQTTTIINQDDAIWGTGSFVKSSAESS
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCHHHHHHHHHH
KEEFPWSSMVLDEDGTVASSWALKEESSAIIVQDKQGKILFVKEGALNDSEVTQVIELIK
HHHCCCCCEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
ASL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7764507; 9298646; 10493123 [H]