| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is fbp [H]
Identifier: 218710690
GI number: 218710690
Start: 2934129
End: 2935139
Strand: Direct
Name: fbp [H]
Synonym: VS_2771
Alternate gene names: 218710690
Gene position: 2934129-2935139 (Clockwise)
Preceding gene: 218710684
Following gene: 218710695
Centisome position: 88.93
GC content: 45.99
Gene sequence:
>1011_bases ATGTCTGAGATGCGCACCCTTGGTGAGTTCATTGTTGAGAAACAGAGTGACTTCCCCCATGCAAGCGGTGATCTATCATC CCTTTTGTCGTCTATTCGACTTGCTGCAAAAATTGTTAACCGTGAGATCAACAAGGCTGGTCTAGTCGACATCACTGGCG CTGTTGGTACAGACAACGTTCAAGGTGAAGAACAGCAAAAGCTAGACCTTTACGCGAACGACAAGTTTAAAGCGGCTCTA GAGGCTCGTGATCAAGTTTGTGGTGTTGCAAGTGAAGAAGAAGACGAAGCTGTCGCCTTCAATAAAGAGCTCAACAAAAA CGCAAAATACGTCGTTCTGATGGACCCACTTGATGGTTCTTCAAACATCGATGTCAATGTATCTGTTGGTACAATCTTCT CTATCTATCGTCGAGTATCGCCTGTTGGTACCCCACCAACACAAGAAGACTTCCTACAGCCAGGACACAAGCAAGTAGCC GCGGGGTACGTAATTTACGGCTCTTCAACTATGCTTGTTTACACAACTGGTGCAGGTGTAAATGGCTTCACCTACGACCC ATCTCTGGGCACCTTCTGTCTGTCTCATGAAAACATGATGATCCCTGATGAAGGTAAGATTTATTCCATCAACGAAGGTA ACTACATTCGCTTCCCTACGGGTGTTAAAAAGTACATCAAGTACTGCCAAGAAAATGAGCCAAGCGACAACCGCCCTTAC ACATCACGTTACATCGGTTCTCTAGTATCAGATTTCCACCGTAATCTTCTGAAAGGCGGTATCTACTTATACCCGAGTAC ACAAAGCCACCCTCAAGGTAAACTGCGTCTGCTGTACGAGTGCAACCCAATAGCCTTCATCATGGAGCAAGCTGGCGGTA TTGCCTCCGATGGCGCCCAACGCATCATGGATATAAAACCAACAGAACTGCACCAACGTGTGCCTTTCTTTGTCGGTTCT AAGAACATGGTGAAAAAGGTAGAAGAGTTCCTTGAACTTAACCGAGACTAA
Upstream 100 bases:
>100_bases TAGAATTTAAGTAGGCGTCTAGGTGAATAAAGCCCGAGTAAGAGGCAAATTCTATAGTGCTCAAATCCCCCTAATATTGA GAGAAGTTTAAGGAAATAAC
Downstream 100 bases:
>100_bases TCGTCTCGCTTATTTTTCAAATTAACGCCATTAAAAAAGCCAGCATTTACATGCTGGCTTTTTGTTATCTACTGAGTTGA TTATTGACTAGACTATCGAA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSEMRTLGEFIVEKQSDFPHASGDLSSLLSSIRLAAKIVNREINKAGLVDITGAVGTDNVQGEEQQKLDLYANDKFKAAL EARDQVCGVASEEEDEAVAFNKELNKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGHKQVA AGYVIYGSSTMLVYTTGAGVNGFTYDPSLGTFCLSHENMMIPDEGKIYSINEGNYIRFPTGVKKYIKYCQENEPSDNRPY TSRYIGSLVSDFHRNLLKGGIYLYPSTQSHPQGKLRLLYECNPIAFIMEQAGGIASDGAQRIMDIKPTELHQRVPFFVGS KNMVKKVEEFLELNRD
Sequences:
>Translated_336_residues MSEMRTLGEFIVEKQSDFPHASGDLSSLLSSIRLAAKIVNREINKAGLVDITGAVGTDNVQGEEQQKLDLYANDKFKAAL EARDQVCGVASEEEDEAVAFNKELNKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGHKQVA AGYVIYGSSTMLVYTTGAGVNGFTYDPSLGTFCLSHENMMIPDEGKIYSINEGNYIRFPTGVKKYIKYCQENEPSDNRPY TSRYIGSLVSDFHRNLLKGGIYLYPSTQSHPQGKLRLLYECNPIAFIMEQAGGIASDGAQRIMDIKPTELHQRVPFFVGS KNMVKKVEEFLELNRD >Mature_335_residues SEMRTLGEFIVEKQSDFPHASGDLSSLLSSIRLAAKIVNREINKAGLVDITGAVGTDNVQGEEQQKLDLYANDKFKAALE ARDQVCGVASEEEDEAVAFNKELNKNAKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGHKQVAA GYVIYGSSTMLVYTTGAGVNGFTYDPSLGTFCLSHENMMIPDEGKIYSINEGNYIRFPTGVKKYIKYCQENEPSDNRPYT SRYIGSLVSDFHRNLLKGGIYLYPSTQSHPQGKLRLLYECNPIAFIMEQAGGIASDGAQRIMDIKPTELHQRVPFFVGSK NMVKKVEEFLELNRD
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=331, Percent_Identity=44.7129909365559, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI189083692, Length=332, Percent_Identity=44.578313253012, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI16579888, Length=332, Percent_Identity=44.578313253012, Blast_Score=278, Evalue=5e-75, Organism=Escherichia coli, GI1790679, Length=328, Percent_Identity=75.609756097561, Blast_Score=519, Evalue=1e-149, Organism=Caenorhabditis elegans, GI17508131, Length=326, Percent_Identity=47.239263803681, Blast_Score=311, Evalue=3e-85, Organism=Saccharomyces cerevisiae, GI6323409, Length=333, Percent_Identity=41.4414414414414, Blast_Score=267, Evalue=2e-72, Organism=Drosophila melanogaster, GI45550998, Length=331, Percent_Identity=48.9425981873112, Blast_Score=317, Evalue=8e-87, Organism=Drosophila melanogaster, GI19921562, Length=331, Percent_Identity=48.9425981873112, Blast_Score=317, Evalue=1e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 - InterPro: IPR020548 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37254; Mature: 37122
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00124 FBPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMRTLGEFIVEKQSDFPHASGDLSSLLSSIRLAAKIVNREINKAGLVDITGAVGTDNV CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC QGEEQQKLDLYANDKFKAALEARDQVCGVASEEEDEAVAFNKELNKNAKYVVLMDPLDGS CCCCHHCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECHHCCCCCCEEEEECCCCCC SNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGHKQVAAGYVIYGSSTMLVYTTGAGV CCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHEEEEEEEECCCEEEEEEECCCC NGFTYDPSLGTFCLSHENMMIPDEGKIYSINEGNYIRFPTGVKKYIKYCQENEPSDNRPY CCEEECCCCCEEEECCCCEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCH TSRYIGSLVSDFHRNLLKGGIYLYPSTQSHPQGKLRLLYECNPIAFIMEQAGGIASDGAQ HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHH RIMDIKPTELHQRVPFFVGSKNMVKKVEEFLELNRD HHHCCCHHHHHHCCCEEECCHHHHHHHHHHHHCCCC >Mature Secondary Structure SEMRTLGEFIVEKQSDFPHASGDLSSLLSSIRLAAKIVNREINKAGLVDITGAVGTDNV CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC QGEEQQKLDLYANDKFKAALEARDQVCGVASEEEDEAVAFNKELNKNAKYVVLMDPLDGS CCCCHHCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEECHHCCCCCCEEEEECCCCCC SNIDVNVSVGTIFSIYRRVSPVGTPPTQEDFLQPGHKQVAAGYVIYGSSTMLVYTTGAGV CCEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHEEEEEEEECCCEEEEEEECCCC NGFTYDPSLGTFCLSHENMMIPDEGKIYSINEGNYIRFPTGVKKYIKYCQENEPSDNRPY CCEEECCCCCEEEECCCCEECCCCCCEEEECCCCEEECCHHHHHHHHHHHCCCCCCCCCH TSRYIGSLVSDFHRNLLKGGIYLYPSTQSHPQGKLRLLYECNPIAFIMEQAGGIASDGAQ HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCHH RIMDIKPTELHQRVPFFVGSKNMVKKVEEFLELNRD HHHCCCHHHHHHCCCEEECCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA