Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710656

Identifier: 218710656

GI number: 218710656

Start: 2904264

End: 2905061

Strand: Reverse

Name: 218710656

Synonym: VS_2736

Alternate gene names: NA

Gene position: 2905061-2904264 (Counterclockwise)

Preceding gene: 218710657

Following gene: 218710648

Centisome position: 88.05

GC content: 45.99

Gene sequence:

>798_bases
ATGCGGCTACCTCTCGATGGTCTTTGGCAAATTTCGCCACTGACGGATCTCTCTATCCCACAAGATGACATTACCTTTCC
TGCTCCATTAAGCTCAAAGCTCCCTAATAGCTTGAGTGAAGAGGAAATCGCAGAGCAAGAATGGCACCTGATGCATGACA
TCGAAGTGGATGATGCCATGTTGGCATGCCCATTTGTTGAGCTAGTCGTCGCAGGCGTTGACTACTTTGCAGAAGTGCGA
CTCAATGGCGTTGCCGTGTTTGACTGTGATGGCAGCGAAGCCGAATATCGCAAGGACATTCGTCCTTATATGCAGCCTGG
TCGAAATCGTTTTGAGATCCTTTTCCTTGAAGAAGAGGAGAGCCTGTTGCTTGAAGAGGATATGGATGACTCTATCTCTT
CACAGGTCGTCGCTAAATCAGATTCTCGTATCGGAATCTGGCAAGCTCCATATCTTCAGTTCGTTCGTAACGTCAAGCTT
GAGCAAGTTGTCACCGAGCAAATCTGGCATCACGGTGGTGGGTGTGAGTTTAAAGTAGATGTTATCTATCAAACGCTAAA
GCCGGGATTAATATCTGCATCAATCAAGTTTAATGGTATGACTCTCGTGATGCCGATTGATGTGCGAGCAGAACATACGG
GTGTTGTGTTTCAGGTTGAGGCTCCACTGGTATTTAACCTTGAGAAGCCCAATCCTAAGCATTTATATCAGTTAGAAGTG
GAACTCGATGGGCAAAAAGAGAGTTCTTTCGTAGCCTTGAATCCAGCCTCTTGCGTGAGTAATTTTTTGCGTAACTAG

Upstream 100 bases:

>100_bases
AGCCTTGAGCTGGCATTTTTTTGTCCTCAGAAAAATAAATGTCTTTATATGCATTCATTCATTATAATGCGGTCAAAATT
GATCTAGCTCAAGGAATGAC

Downstream 100 bases:

>100_bases
CGGTTATTCGATTAGCCCTTTACGCAATAAATTAATTTGTTCACTCGTTTGTCATCTAATGAACTGCCGACGCTCACCCT
ATTTCAAAAACACATTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRLPLDGLWQISPLTDLSIPQDDITFPAPLSSKLPNSLSEEEIAEQEWHLMHDIEVDDAMLACPFVELVVAGVDYFAEVR
LNGVAVFDCDGSEAEYRKDIRPYMQPGRNRFEILFLEEEESLLLEEDMDDSISSQVVAKSDSRIGIWQAPYLQFVRNVKL
EQVVTEQIWHHGGGCEFKVDVIYQTLKPGLISASIKFNGMTLVMPIDVRAEHTGVVFQVEAPLVFNLEKPNPKHLYQLEV
ELDGQKESSFVALNPASCVSNFLRN

Sequences:

>Translated_265_residues
MRLPLDGLWQISPLTDLSIPQDDITFPAPLSSKLPNSLSEEEIAEQEWHLMHDIEVDDAMLACPFVELVVAGVDYFAEVR
LNGVAVFDCDGSEAEYRKDIRPYMQPGRNRFEILFLEEEESLLLEEDMDDSISSQVVAKSDSRIGIWQAPYLQFVRNVKL
EQVVTEQIWHHGGGCEFKVDVIYQTLKPGLISASIKFNGMTLVMPIDVRAEHTGVVFQVEAPLVFNLEKPNPKHLYQLEV
ELDGQKESSFVALNPASCVSNFLRN
>Mature_265_residues
MRLPLDGLWQISPLTDLSIPQDDITFPAPLSSKLPNSLSEEEIAEQEWHLMHDIEVDDAMLACPFVELVVAGVDYFAEVR
LNGVAVFDCDGSEAEYRKDIRPYMQPGRNRFEILFLEEEESLLLEEDMDDSISSQVVAKSDSRIGIWQAPYLQFVRNVKL
EQVVTEQIWHHGGGCEFKVDVIYQTLKPGLISASIKFNGMTLVMPIDVRAEHTGVVFQVEAPLVFNLEKPNPKHLYQLEV
ELDGQKESSFVALNPASCVSNFLRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29968; Mature: 29968

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPLDGLWQISPLTDLSIPQDDITFPAPLSSKLPNSLSEEEIAEQEWHLMHDIEVDDAM
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHEEECCCCCCHH
LACPFVELVVAGVDYFAEVRLNGVAVFDCDGSEAEYRKDIRPYMQPGRNRFEILFLEEEE
HHHHHHHHHHHHHHHEEEEEECCEEEEECCCCHHHHHHHCCHHHCCCCCEEEEEEEECCC
SLLLEEDMDDSISSQVVAKSDSRIGIWQAPYLQFVRNVKLEQVVTEQIWHHGGGCEFKVD
CEEECCCCCCHHHHHEEECCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
VIYQTLKPGLISASIKFNGMTLVMPIDVRAEHTGVVFQVEAPLVFNLEKPNPKHLYQLEV
EEEHHHCCCEEEEEEEECCEEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEEEEE
ELDGQKESSFVALNPASCVSNFLRN
EECCCCCCCEEEECHHHHHHHHHCC
>Mature Secondary Structure
MRLPLDGLWQISPLTDLSIPQDDITFPAPLSSKLPNSLSEEEIAEQEWHLMHDIEVDDAM
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHEEECCCCCCHH
LACPFVELVVAGVDYFAEVRLNGVAVFDCDGSEAEYRKDIRPYMQPGRNRFEILFLEEEE
HHHHHHHHHHHHHHHEEEEEECCEEEEECCCCHHHHHHHCCHHHCCCCCEEEEEEEECCC
SLLLEEDMDDSISSQVVAKSDSRIGIWQAPYLQFVRNVKLEQVVTEQIWHHGGGCEFKVD
CEEECCCCCCHHHHHEEECCCCCEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
VIYQTLKPGLISASIKFNGMTLVMPIDVRAEHTGVVFQVEAPLVFNLEKPNPKHLYQLEV
EEEHHHCCCEEEEEEEECCEEEEEEEEEEECCCCEEEEECCCEEEEECCCCCCEEEEEEE
ELDGQKESSFVALNPASCVSNFLRN
EECCCCCCCEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA