| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710643
Identifier: 218710643
GI number: 218710643
Start: 2884757
End: 2885164
Strand: Reverse
Name: 218710643
Synonym: VS_2709
Alternate gene names: NA
Gene position: 2885164-2884757 (Counterclockwise)
Preceding gene: 218710644
Following gene: 218710641
Centisome position: 87.45
GC content: 38.73
Gene sequence:
>408_bases ATGGGGCGAACTATGAAATTAAGCTTTAACTTTGAAGATGCAAGTCAGATCTTTGTAGGATCTTTTGCTTTGGCTGTACC GATTTCTTTTTCCGAAGAAGCCTGGAAGTTAGGGGAGACTTTGCCTACTGCTAATCTGTTGCTGCTATTTTTATTATCAG CAGTGTTCTTAGGCTTTTATACTTATGAAAGTGTCTTTCAGAAAAATGTTGTTGCACGCATGCCGGTGTTTATTTTCAGA ATTGTTATTGCTTATGCTATGACGGCGTTGGTAGTTGCTTTGGTACTGACATGTTTGGATAAATTGCCTCTATTAAGCGA TCCAATAGTCTCGTTTAAACGTGTCATTGTTATATCAATGCCCGCGTCTATGGGGGCTATTATAGTGGATAGTTTCGATA AAGAGTGA
Upstream 100 bases:
>100_bases AGAAGGGCGTTATTGTTCGCTTGGTAAGAATAGACTCAAAAAAATCATCGGGTGATATTTTAGTGATTATTTTAACAAAT AGATAAAGCCTTAAAAGCTA
Downstream 100 bases:
>100_bases AACTGTATATCACCCAGGTTAAGTCATCAACAGAGCCATTCTGGCGCTTATTTGGTTCACTCTTAGATAACACAAGTAGC AAGCTCGCTAGAAAGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFR IVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE
Sequences:
>Translated_135_residues MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFR IVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE >Mature_134_residues GRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFYTYESVFQKNVVARMPVFIFRI VIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISMPASMGAIIVDSFDKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14939; Mature: 14808
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFY CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TYESVFQKNVVARMPVFIFRIVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEC PASMGAIIVDSFDKE CCCCCCCEECCCCCC >Mature Secondary Structure GRTMKLSFNFEDASQIFVGSFALAVPISFSEEAWKLGETLPTANLLLLFLLSAVFLGFY CCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH TYESVFQKNVVARMPVFIFRIVIAYAMTALVVALVLTCLDKLPLLSDPIVSFKRVIVISM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEC PASMGAIIVDSFDKE CCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA