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The map label for this gene is sprT

Identifier: 218710619

GI number: 218710619

Start: 2860937

End: 2861437

Strand: Direct

Name: sprT

Synonym: VS_2673

Alternate gene names: 218710619

Gene position: 2860937-2861437 (Clockwise)

Preceding gene: 218710618

Following gene: 218710620

Centisome position: 86.71

GC content: 45.51

Gene sequence:

>501_bases
TTGTCTTACACCCCGCAACAACATCGAGTAAATAAAAAACTGGGCGAATGCCTAGCTATCGCTAATCAACATTTTTCTCG
TGAATTTCCATGCCCAACCGTCACTTACAAGTTAAGAGGAAAGGCAGCGGGAAAAGCCTACCTCCAGTTAAACGAGATAA
AACTCAACCAAGTGCTATTCAGCGAAAATGAAGACGCCTTTATTAACGAAGTCGTGCCTCATGAACTCGCACATCTGATC
ACACATCAGGTCTTCGGACGAGTTAGGCCTCACGGCAATGAGTGGAAATACGTGATGGAAAAGGTATTCAATGTACCGGC
CAGAACGACCCACAGCTTGGAAATCACCTCAGTGCAGGGCAAAACTTTTGAGTATCGCTGTGATTGCACCACTTATCCCC
TGTCGATAAGACGACACAACAAAGTCATCCGCAACCAATCAACGTATCGTTGCCAACAATGCCAGCAAACCTTAGCTTTT
ACCGGCCTTCAATTGAGCTAA

Upstream 100 bases:

>100_bases
CAAAAAGAAACATCACGTTTAAATCGTTTCACGATCGATGAGCAATGTTATGATGAGGCCTTAGCTTAAACGCTGAGGCT
TTTTTTGGAGTTAACAACGC

Downstream 100 bases:

>100_bases
GTCTTAAGCTCACAAAGTAACGCGAATAAATGTAATAGAGAGAACTAACATTTGAGTGCTAGACTGTTGTTTATCATACT
TTCATCAGTCTTCTCTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSYTPQQHRVNKKLGECLAIANQHFSREFPCPTVTYKLRGKAAGKAYLQLNEIKLNQVLFSENEDAFINEVVPHELAHLI
THQVFGRVRPHGNEWKYVMEKVFNVPARTTHSLEITSVQGKTFEYRCDCTTYPLSIRRHNKVIRNQSTYRCQQCQQTLAF
TGLQLS

Sequences:

>Translated_166_residues
MSYTPQQHRVNKKLGECLAIANQHFSREFPCPTVTYKLRGKAAGKAYLQLNEIKLNQVLFSENEDAFINEVVPHELAHLI
THQVFGRVRPHGNEWKYVMEKVFNVPARTTHSLEITSVQGKTFEYRCDCTTYPLSIRRHNKVIRNQSTYRCQQCQQTLAF
TGLQLS
>Mature_165_residues
SYTPQQHRVNKKLGECLAIANQHFSREFPCPTVTYKLRGKAAGKAYLQLNEIKLNQVLFSENEDAFINEVVPHELAHLIT
HQVFGRVRPHGNEWKYVMEKVFNVPARTTHSLEITSVQGKTFEYRCDCTTYPLSIRRHNKVIRNQSTYRCQQCQQTLAFT
GLQLS

Specific function: Involved In Bola Gene Expression At The Stationary Phase. [C]

COG id: COG3091

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sprT family

Homologues:

Organism=Escherichia coli, GI1789313, Length=152, Percent_Identity=51.9736842105263, Blast_Score=170, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SPRT_VIBSL (B7VKP6)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418240.1
- GeneID:   7162188
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2673
- HOGENOM:   HBG495224
- OMA:   QFGRVPP
- ProtClustDB:   PRK04860
- GO:   GO:0005737
- HAMAP:   MF_00746
- InterPro:   IPR006640
- SMART:   SM00731

Pfam domain/function: PF10263 SprT-like

EC number: NA

Molecular weight: Translated: 19255; Mature: 19124

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: ACT_SITE 75-75

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTPQQHRVNKKLGECLAIANQHFSREFPCPTVTYKLRGKAAGKAYLQLNEIKLNQVLF
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEHHEE
SENEDAFINEVVPHELAHLITHQVFGRVRPHGNEWKYVMEKVFNVPARTTHSLEITSVQG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECC
KTFEYRCDCTTYPLSIRRHNKVIRNQSTYRCQQCQQTLAFTGLQLS
CEEEEEECCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SYTPQQHRVNKKLGECLAIANQHFSREFPCPTVTYKLRGKAAGKAYLQLNEIKLNQVLF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEHHEE
SENEDAFINEVVPHELAHLITHQVFGRVRPHGNEWKYVMEKVFNVPARTTHSLEITSVQG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECC
KTFEYRCDCTTYPLSIRRHNKVIRNQSTYRCQQCQQTLAFTGLQLS
CEEEEEECCEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA