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The map label for this gene is 218710618

Identifier: 218710618

GI number: 218710618

Start: 2860061

End: 2860858

Strand: Direct

Name: 218710618

Synonym: VS_2672

Alternate gene names: NA

Gene position: 2860061-2860858 (Clockwise)

Preceding gene: 218710617

Following gene: 218710619

Centisome position: 86.69

GC content: 44.61

Gene sequence:

>798_bases
ATGCCTCGTACATTGAATACGCAAGACTTCGACGATAAACCAAAAGAAATCAAAGACTCAGAATACGCTCGTACAATACC
ATGTAATCAGGTGAGCATTTCAGCGCCCTTTCATTGGTTGTCGCTTGCTCTGCACGACTTAGTGAGAATGCCATTAATCA
GCGCATTTTACGGTTTGTGCTTTATGGGTGCGGCCATCGCCATTGTTCAACTTGTCCAATGGCAAGGAACACATTTAGTC
GTTATGCCAAGCTTGATTGTGTACATGCTAATAGGGCCGTTTCTTGCCCTAGGCTTATATGACGCAGCCTGGGAAAGAGA
AAAGGGGCACAACGCTAGCCTACTGCACTCGATGAAAGCCATCACACGCAACTCAACCCACCAATGGGCGTTTGCGATTG
TATTAATGGTTGCGATGATATTCTGGATGCGTATCGCTGCATTATTGCACGCACTTTACCCTTCAGTACAAGGGGCACCA
TTGACCGAATTTGCTCCCTTCTTAATTACAGGGTCTGTAATTGGTTTTGTTATCGCTAGCCTGATATTTAGTATCTCAGC
ATTTTCAATTCCACTAATGATGGAGAGACGTGTAGATGTAATGAGTGCGATTTTTACTAGCTTCAACGCTGTTAAATCAA
ACATCCCTGCGATGGTCGTTTGGGCTGGTATCATTGGTACTGGTATCTTAGTCGGCTTCGCGACCTACGGTGTGGGGATG
ATTGTAACGATGCCATTACTTGGTTACGGAACATGGCATGCTTACCACGAAGTCATCAAAAAGAAACATCACGTTTAA

Upstream 100 bases:

>100_bases
TGATGCACGCTTACATTAAAGACGTCGCCAAGTCGGGCATCGAGTTTCGTTCGCTGTAATTTAACTGCAGCGCAGGTAGA
AAACCGATCAAGGAGGATCT

Downstream 100 bases:

>100_bases
ATCGTTTCACGATCGATGAGCAATGTTATGATGAGGCCTTAGCTTAAACGCTGAGGCTTTTTTTGGAGTTAACAACGCTT
GTCTTACACCCCGCAACAAC

Product: putative cytochrome c oxidase, subunit I

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane-Like Protein; Transmembrane Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MPRTLNTQDFDDKPKEIKDSEYARTIPCNQVSISAPFHWLSLALHDLVRMPLISAFYGLCFMGAAIAIVQLVQWQGTHLV
VMPSLIVYMLIGPFLALGLYDAAWEREKGHNASLLHSMKAITRNSTHQWAFAIVLMVAMIFWMRIAALLHALYPSVQGAP
LTEFAPFLITGSVIGFVIASLIFSISAFSIPLMMERRVDVMSAIFTSFNAVKSNIPAMVVWAGIIGTGILVGFATYGVGM
IVTMPLLGYGTWHAYHEVIKKKHHV

Sequences:

>Translated_265_residues
MPRTLNTQDFDDKPKEIKDSEYARTIPCNQVSISAPFHWLSLALHDLVRMPLISAFYGLCFMGAAIAIVQLVQWQGTHLV
VMPSLIVYMLIGPFLALGLYDAAWEREKGHNASLLHSMKAITRNSTHQWAFAIVLMVAMIFWMRIAALLHALYPSVQGAP
LTEFAPFLITGSVIGFVIASLIFSISAFSIPLMMERRVDVMSAIFTSFNAVKSNIPAMVVWAGIIGTGILVGFATYGVGM
IVTMPLLGYGTWHAYHEVIKKKHHV
>Mature_264_residues
PRTLNTQDFDDKPKEIKDSEYARTIPCNQVSISAPFHWLSLALHDLVRMPLISAFYGLCFMGAAIAIVQLVQWQGTHLVV
MPSLIVYMLIGPFLALGLYDAAWEREKGHNASLLHSMKAITRNSTHQWAFAIVLMVAMIFWMRIAALLHALYPSVQGAPL
TEFAPFLITGSVIGFVIASLIFSISAFSIPLMMERRVDVMSAIFTSFNAVKSNIPAMVVWAGIIGTGILVGFATYGVGMI
VTMPLLGYGTWHAYHEVIKKKHHV

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29381; Mature: 29250

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTLNTQDFDDKPKEIKDSEYARTIPCNQVSISAPFHWLSLALHDLVRMPLISAFYGLC
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FMGAAIAIVQLVQWQGTHLVVMPSLIVYMLIGPFLALGLYDAAWEREKGHNASLLHSMKA
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ITRNSTHQWAFAIVLMVAMIFWMRIAALLHALYPSVQGAPLTEFAPFLITGSVIGFVIAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIFSISAFSIPLMMERRVDVMSAIFTSFNAVKSNIPAMVVWAGIIGTGILVGFATYGVGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVTMPLLGYGTWHAYHEVIKKKHHV
HHHHHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRTLNTQDFDDKPKEIKDSEYARTIPCNQVSISAPFHWLSLALHDLVRMPLISAFYGLC
CCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
FMGAAIAIVQLVQWQGTHLVVMPSLIVYMLIGPFLALGLYDAAWEREKGHNASLLHSMKA
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ITRNSTHQWAFAIVLMVAMIFWMRIAALLHALYPSVQGAPLTEFAPFLITGSVIGFVIAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIFSISAFSIPLMMERRVDVMSAIFTSFNAVKSNIPAMVVWAGIIGTGILVGFATYGVGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
IVTMPLLGYGTWHAYHEVIKKKHHV
HHHHHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA