Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710600

Identifier: 218710600

GI number: 218710600

Start: 2840254

End: 2840490

Strand: Direct

Name: 218710600

Synonym: VS_2653

Alternate gene names: NA

Gene position: 2840254-2840490 (Clockwise)

Preceding gene: 218710592

Following gene: 218710602

Centisome position: 86.09

GC content: 37.55

Gene sequence:

>237_bases
ATGTCTGGATTTCCAGCGACTCATTTTTGTAAAACGTGCAATAAAGAAACGCCACATAGTGAAGTTCTTGTTCGCCAAAC
AAGCAGCTATGATACCGACAAAACTTTGTTAGGAAGAATAAAGCTGTTTGCTAATTCAATTATCAATGGTGGTCATTACT
ACAACATGGATCGTTACGTTGAATGTAAGGTCTGTGGGACTAGAGAACTTGATAATTGGGGAAATGAATTCGAGTAA

Upstream 100 bases:

>100_bases
TCTAGCGAATGTAATAGCTATTATGCAATGATATCTAAATGAGTCTGACCTAATTCTACGGCTGTTTCTAACCTAGTTTT
CTCAACCAAAGGAAAAGGTT

Downstream 100 bases:

>100_bases
CTCATGTTTCTGAAAGCCAAATAAAAAACCGAGCCAGTGGCTCGGTTTTTTTCTATTCGCGTTACAACGAATGATTAAGC
AAGAAGCTCTTTTGCAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE

Sequences:

>Translated_78_residues
MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE
>Mature_77_residues
SGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8969; Mature: 8838

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYV
CCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEE
ECKVCGTRELDNWGNEFE
EEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYV
CCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEE
ECKVCGTRELDNWGNEFE
EEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA