| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710600
Identifier: 218710600
GI number: 218710600
Start: 2840254
End: 2840490
Strand: Direct
Name: 218710600
Synonym: VS_2653
Alternate gene names: NA
Gene position: 2840254-2840490 (Clockwise)
Preceding gene: 218710592
Following gene: 218710602
Centisome position: 86.09
GC content: 37.55
Gene sequence:
>237_bases ATGTCTGGATTTCCAGCGACTCATTTTTGTAAAACGTGCAATAAAGAAACGCCACATAGTGAAGTTCTTGTTCGCCAAAC AAGCAGCTATGATACCGACAAAACTTTGTTAGGAAGAATAAAGCTGTTTGCTAATTCAATTATCAATGGTGGTCATTACT ACAACATGGATCGTTACGTTGAATGTAAGGTCTGTGGGACTAGAGAACTTGATAATTGGGGAAATGAATTCGAGTAA
Upstream 100 bases:
>100_bases TCTAGCGAATGTAATAGCTATTATGCAATGATATCTAAATGAGTCTGACCTAATTCTACGGCTGTTTCTAACCTAGTTTT CTCAACCAAAGGAAAAGGTT
Downstream 100 bases:
>100_bases CTCATGTTTCTGAAAGCCAAATAAAAAACCGAGCCAGTGGCTCGGTTTTTTTCTATTCGCGTTACAACGAATGATTAAGC AAGAAGCTCTTTTGCAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE
Sequences:
>Translated_78_residues MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE >Mature_77_residues SGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYVECKVCGTRELDNWGNEFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8969; Mature: 8838
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYV CCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEE ECKVCGTRELDNWGNEFE EEEECCCCCCCCCCCCCC >Mature Secondary Structure SGFPATHFCKTCNKETPHSEVLVRQTSSYDTDKTLLGRIKLFANSIINGGHYYNMDRYV CCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCEE ECKVCGTRELDNWGNEFE EEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA