| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is metK [H]
Identifier: 218710602
GI number: 218710602
Start: 2842937
End: 2844088
Strand: Direct
Name: metK [H]
Synonym: VS_2655
Alternate gene names: 218710602
Gene position: 2842937-2844088 (Clockwise)
Preceding gene: 218710600
Following gene: 218710603
Centisome position: 86.17
GC content: 46.53
Gene sequence:
>1152_bases ATGGCTAAGCACCTATTCACTTCTGAATCTGTTTCAGAAGGCCATCCAGATAAAATTGCAGACCAAATCTCAGATGCTGT TCTTGATGCCATCATTGAACAAGATCCAAAAGCACGTGTTGCTTGTGAGACTTACGTAAAAACCGGCATGGTTATGGTTG GCGGTGAAGTAACCACGTCTGCATGGGTTGATATCGAAGAAATCACTCGTGAAACAGTTCGTGAAATTGGTTACGTTCAT TCTGATATGGGCTTTGACGCTGACTCTTGTGCAGTACTAAACACAATTGGTAAGCAGTCTCCAGACATCAACCAAGGTGT TGATAAAGCCGATCCTAAAGATCAAGGCGCAGGCGACCAAGGTATCATGTTTGGTTACGCGACTAACGAAACACCAATCC TAATGCCAGCTCCAATTACTTACTCTCACCTTCTTGTTAAGAAGCAAGCTGAAGTACGTAAGAGCGGCAAGCTTGACTTC CTTCGCCCAGATGCGAAATCTCAAGTAACGTTCCAATACGACCAAGGTAAGATCGTTGGTATCGACGCTGTTGTTCTTTC AACTCAACACTGTGATTCAGTAACAACACCTGACCTACGTGAAGCGGTAATGGAAGAGATCATCAAGCCAGTACTTCCTG CTGAGTGGATCAATAAAGACACTAACTTCTTCATCAACCCAACAGGCCGTTTCGTAATCGGTGGCCCAATGGGTGATTGT GGTCTAACAGGTCGTAAGATCATCGTTGATACCTACGGCGGCGCTGCTCGTCACGGTGGCGGTGCATTCTCTGGTAAAGA TCCATCAAAAGTTGACCGTTCTGCAGCTTACGCAGCTCGTTACGTTGCGAAAAACATCGTTGCTGCTGGCATGGCTGACC GTTGTGAGATTCAACTGTCTTACGCTATCGGTGTTGCAGATCCAACATCTATCATGGTTGAAACGTTTGGTACTGAGAAA GTAGCGCACGAAATCATCATTGAAGCAGTTCGTCAAAACTTCGACCTACGTCCATACGGTCTTCAAGAGATGCTGAACCT TCTTCAACCTATCTACAAGCAGACTGCTGCATACGGCCACTTCGGTCGCGAAGAGTTCCCTTGGGAAGCAACTGACAAAG CCGCTATCCTTGCGGACTTCGCAGGCCTGTAA
Upstream 100 bases:
>100_bases ATATACTGTATTGAATGGCGGCGCTTCCTCGATTGCGACGGCATAAATTATTTGCATTTAACTATTTGCAACTAAAAACT AAACTAAAAGTGGAGCTCTC
Downstream 100 bases:
>100_bases GCATTACGCAACACGCTTAGCTGAAACGTAATTTTAAAAGCCTCTGTTCTCAGAGGCTTTTTTCTTTCTATTCTTCTATT CTTCTATTCTTCTATTCTTC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVH SDMGFDADSCAVLNTIGKQSPDINQGVDKADPKDQGAGDQGIMFGYATNETPILMPAPITYSHLLVKKQAEVRKSGKLDF LRPDAKSQVTFQYDQGKIVGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWINKDTNFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLSYAIGVADPTSIMVETFGTEK VAHEIIIEAVRQNFDLRPYGLQEMLNLLQPIYKQTAAYGHFGREEFPWEATDKAAILADFAGL
Sequences:
>Translated_383_residues MAKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVH SDMGFDADSCAVLNTIGKQSPDINQGVDKADPKDQGAGDQGIMFGYATNETPILMPAPITYSHLLVKKQAEVRKSGKLDF LRPDAKSQVTFQYDQGKIVGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWINKDTNFFINPTGRFVIGGPMGDC GLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLSYAIGVADPTSIMVETFGTEK VAHEIIIEAVRQNFDLRPYGLQEMLNLLQPIYKQTAAYGHFGREEFPWEATDKAAILADFAGL >Mature_382_residues AKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHS DMGFDADSCAVLNTIGKQSPDINQGVDKADPKDQGAGDQGIMFGYATNETPILMPAPITYSHLLVKKQAEVRKSGKLDFL RPDAKSQVTFQYDQGKIVGIDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWINKDTNFFINPTGRFVIGGPMGDCG LTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLSYAIGVADPTSIMVETFGTEKV AHEIIIEAVRQNFDLRPYGLQEMLNLLQPIYKQTAAYGHFGREEFPWEATDKAAILADFAGL
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=374, Percent_Identity=55.6149732620321, Blast_Score=404, Evalue=1e-113, Organism=Homo sapiens, GI4557737, Length=374, Percent_Identity=55.3475935828877, Blast_Score=402, Evalue=1e-112, Organism=Escherichia coli, GI1789311, Length=383, Percent_Identity=84.0731070496084, Blast_Score=675, Evalue=0.0, Organism=Caenorhabditis elegans, GI17538498, Length=384, Percent_Identity=55.9895833333333, Blast_Score=406, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17538494, Length=377, Percent_Identity=56.2334217506631, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25145633, Length=384, Percent_Identity=55.46875, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17551082, Length=373, Percent_Identity=54.4235924932976, Blast_Score=392, Evalue=1e-109, Organism=Caenorhabditis elegans, GI32565905, Length=377, Percent_Identity=50.9283819628647, Blast_Score=340, Evalue=8e-94, Organism=Caenorhabditis elegans, GI32565911, Length=337, Percent_Identity=52.8189910979229, Blast_Score=332, Evalue=2e-91, Organism=Caenorhabditis elegans, GI25145635, Length=337, Percent_Identity=52.2255192878338, Blast_Score=326, Evalue=1e-89, Organism=Caenorhabditis elegans, GI32565903, Length=299, Percent_Identity=53.8461538461538, Blast_Score=297, Evalue=8e-81, Organism=Caenorhabditis elegans, GI32565909, Length=87, Percent_Identity=59.7701149425287, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI32565907, Length=46, Percent_Identity=71.7391304347826, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323209, Length=370, Percent_Identity=57.8378378378378, Blast_Score=412, Evalue=1e-116, Organism=Saccharomyces cerevisiae, GI6320710, Length=374, Percent_Identity=56.4171122994652, Blast_Score=408, Evalue=1e-115, Organism=Drosophila melanogaster, GI45552159, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580529, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580537, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580533, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580535, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580531, Length=373, Percent_Identity=54.9597855227882, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580527, Length=373, Percent_Identity=54.9597855227882, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580525, Length=373, Percent_Identity=54.9597855227882, Blast_Score=378, Evalue=1e-105, Organism=Drosophila melanogaster, GI24580541, Length=372, Percent_Identity=52.6881720430108, Blast_Score=356, Evalue=2e-98, Organism=Drosophila melanogaster, GI24580539, Length=120, Percent_Identity=55.8333333333333, Blast_Score=131, Evalue=8e-31,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 41600; Mature: 41468
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRETVREIGYVHSDMGFDADSCAVLNTIGKQSPDINQGVDKADPKDQGAGDQ HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCC GIMFGYATNETPILMPAPITYSHLLVKKQAEVRKSGKLDFLRPDAKSQVTFQYDQGKIVG CEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCEEEE IDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWINKDTNFFINPTGRFVIGGPMGDC EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLS CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YAIGVADPTSIMVETFGTEKVAHEIIIEAVRQNFDLRPYGLQEMLNLLQPIYKQTAAYGH EEEECCCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC FGREEFPWEATDKAAILADFAGL CCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure AKHLFTSESVSEGHPDKIADQISDAVLDAIIEQDPKARVACETYVKTGMVMVGGEVTTS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEECCCCCCH AWVDIEEITRETVREIGYVHSDMGFDADSCAVLNTIGKQSPDINQGVDKADPKDQGAGDQ HCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCC GIMFGYATNETPILMPAPITYSHLLVKKQAEVRKSGKLDFLRPDAKSQVTFQYDQGKIVG CEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEEECCCEEEE IDAVVLSTQHCDSVTTPDLREAVMEEIIKPVLPAEWINKDTNFFINPTGRFVIGGPMGDC EEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEECCCCCEEECCCCCCC GLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGMADRCEIQLS CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE YAIGVADPTSIMVETFGTEKVAHEIIIEAVRQNFDLRPYGLQEMLNLLQPIYKQTAAYGH EEEECCCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC FGREEFPWEATDKAAILADFAGL CCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA