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The map label for this gene is yggA [H]

Identifier: 218710592

GI number: 218710592

Start: 2829030

End: 2829659

Strand: Direct

Name: yggA [H]

Synonym: VS_2643

Alternate gene names: 218710592

Gene position: 2829030-2829659 (Clockwise)

Preceding gene: 218710589

Following gene: 218710600

Centisome position: 85.75

GC content: 44.29

Gene sequence:

>630_bases
ATGAGTTTTTGGGTTTTATTACAAGGTTTTGGTCTAGGGGCAAGTATGATAATCCCGATAGGCGCACAAAATGCGTACGT
CCTAAATCAAGGCATAAAACGCAATCATCATTTAACGACTGCAACGATTTGTAGCCTGCTCGATACCCTGTTTATCTCAT
TGGGTATTTTTGGTGGCGGAGCAATTCTGTCTCAAAATGAATTGCTGCTTACCTCTGTGACATTGGGCGGTATCGCTTTT
CTAACGGTATATGGTTTGCTATCACTGCGCAGTGCATTCAAAACGCGCACCAGTGATGAATCAAAAGGTGAGGTATTGGC
TCGTGGCAAGCGCACCGTTATTTTGGGTGCATTAGCTGTAACAGTATTAAACCCACACCTCTATTTGGATACCGTGGTGA
TTCTTGGATCTATTGGTGGGCAATTTGAAGGCAACGACAGAGTTGCGTTTGCGATGGGGACTATCTTAGCTTCATTCGTG
TGGTTTTATTCCTTATCATTGGGCGCAGCAAAGCTAGGTCCAACGCTATCGAAACCTAAAGTTAAGAAAGGTATCGATAT
CGCGGTTGCAACCATGATGTTCGCTATTGCACTTGTGCTCGCCAATGGACTCATTGAGCAATACGGGTAA

Upstream 100 bases:

>100_bases
ACTCTAATAATGGATTAAAATCATTAATTATACTTATTTAAAGGGTCGGAGTATCTTCGCCACATAGCACGTAAATATCG
TTAATTAAGTGGAGGTTAAA

Downstream 100 bases:

>100_bases
ACCTATTCTTCTTTAGTCATCAAACAAACTTTACTCATCCAACAAAAAAGGCGAATAACCTAAGTTATCCGCCTTTCCTT
ATAAAAGCTTATAGCTATAA

Product: amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSFWVLLQGFGLGASMIIPIGAQNAYVLNQGIKRNHHLTTATICSLLDTLFISLGIFGGGAILSQNELLLTSVTLGGIAF
LTVYGLLSLRSAFKTRTSDESKGEVLARGKRTVILGALAVTVLNPHLYLDTVVILGSIGGQFEGNDRVAFAMGTILASFV
WFYSLSLGAAKLGPTLSKPKVKKGIDIAVATMMFAIALVLANGLIEQYG

Sequences:

>Translated_209_residues
MSFWVLLQGFGLGASMIIPIGAQNAYVLNQGIKRNHHLTTATICSLLDTLFISLGIFGGGAILSQNELLLTSVTLGGIAF
LTVYGLLSLRSAFKTRTSDESKGEVLARGKRTVILGALAVTVLNPHLYLDTVVILGSIGGQFEGNDRVAFAMGTILASFV
WFYSLSLGAAKLGPTLSKPKVKKGIDIAVATMMFAIALVLANGLIEQYG
>Mature_208_residues
SFWVLLQGFGLGASMIIPIGAQNAYVLNQGIKRNHHLTTATICSLLDTLFISLGIFGGGAILSQNELLLTSVTLGGIAFL
TVYGLLSLRSAFKTRTSDESKGEVLARGKRTVILGALAVTVLNPHLYLDTVVILGSIGGQFEGNDRVAFAMGTILASFVW
FYSLSLGAAKLGPTLSKPKVKKGIDIAVATMMFAIALVLANGLIEQYG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=199, Percent_Identity=48.2412060301507, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22079; Mature: 21948

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFWVLLQGFGLGASMIIPIGAQNAYVLNQGIKRNHHLTTATICSLLDTLFISLGIFGGG
CCEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
AILSQNELLLTSVTLGGIAFLTVYGLLSLRSAFKTRTSDESKGEVLARGKRTVILGALAV
EEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEHHHHHHH
TVLNPHLYLDTVVILGSIGGQFEGNDRVAFAMGTILASFVWFYSLSLGAAKLGPTLSKPK
HHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
VKKGIDIAVATMMFAIALVLANGLIEQYG
HHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFWVLLQGFGLGASMIIPIGAQNAYVLNQGIKRNHHLTTATICSLLDTLFISLGIFGGG
CEEEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
AILSQNELLLTSVTLGGIAFLTVYGLLSLRSAFKTRTSDESKGEVLARGKRTVILGALAV
EEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEHHHHHHH
TVLNPHLYLDTVVILGSIGGQFEGNDRVAFAMGTILASFVWFYSLSLGAAKLGPTLSKPK
HHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
VKKGIDIAVATMMFAIALVLANGLIEQYG
HHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]