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The map label for this gene is recO

Identifier: 218710567

GI number: 218710567

Start: 2806905

End: 2807633

Strand: Reverse

Name: recO

Synonym: VS_2617

Alternate gene names: 218710567

Gene position: 2807633-2806905 (Counterclockwise)

Preceding gene: 218710568

Following gene: 218710566

Centisome position: 85.1

GC content: 48.01

Gene sequence:

>729_bases
TTGAGCGAAGGGTTACAGCGATGCTTTGTGTTGCACCGTCGACCATACAGTGAGTCGAGCCTGATTCTGGACGTCTTCAG
CGAAGAGTACGGTCGGGTGACGTTGATGTCTAAAGGTGCGCGGAGTAAGCGTTCTAATTTGAAAGGTGCATTGCAACCTT
TTACGCCGCTACTGCTTAAGTGGTCTGGCAATGGTTCAATGAAAACGTTGCGCCAAGCTGAACCGATCAGCTTGGGGCTT
CCTCTTGCCGGCATTAATCTGTATTCAGCAATGTACGTTAATGAATTAGTTGGGCGAGTGTTGATGGCCGAAGTGGCCAT
GCCCGCATTTTTTCATGACTATCTTCATGCCTTAACAGAACTCGCTCATAATGAGAACCCTGAGCCAGCGCTACGTCGTT
TTGAATTGGCTCTACTTTCCGCTATGGGGTATGGCGTCGACTTTTTACACTGCGCGGGCACTGGCGAAGCGATTGATCCG
AGCATGACTTATCGCTATCGAGAGCAGAAAGGCTTCATCGCTTCGGTGCGTCGAGATAACCTGACTTTTATGGGCGATGA
ACTTATCGCAATCAGTGAGCGTAGGTTTATCACTAAAGAGCAGTTAAAAGCGGCAAAACGCTTTACACGCATAGCCTTAA
AGCCGTATCTTGGCGGCAAACCATTAAAAAGTAGAGAGCTATTTATGCCAACAATAGCCCTCTCTAGAGCACGGAGTATT
GGAAAATGA

Upstream 100 bases:

>100_bases
TATTGAACGTCACTTTCTGATATTAAGAAAGTTGAATTGAATATAAATACAAGAGAGAGTGCGAACTCTCTCTTTTTGTA
TCTGTAAGAAGGGTAAGTGA

Downstream 100 bases:

>100_bases
GCTCAATCCTTTTAGGCGTTAATATCGACCATATTGCAACTCTACGTAATGCACGTGGTACTAAATATCCAGACCCAGTA
CACGCAGCTGAAATTGCTGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSEGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGL
PLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDP
SMTYRYREQKGFIASVRRDNLTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSI
GK

Sequences:

>Translated_242_residues
MSEGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGL
PLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDP
SMTYRYREQKGFIASVRRDNLTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSI
GK
>Mature_241_residues
SEGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLKWSGNGSMKTLRQAEPISLGLP
LAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTELAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDPS
MTYRYREQKGFIASVRRDNLTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSIG
K

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=227, Percent_Identity=66.5198237885462, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_VIBSL (B7VK77)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002418188.1
- GeneID:   7162136
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_2617
- HOGENOM:   HBG645116
- OMA:   SILQPFQ
- ProtClustDB:   PRK00085
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27207; Mature: 27076

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLK
CCHHHHHHHHHHCCCCCCCHHHHEEHHHHHCEEEEEECCCHHHHHHCCCCCCCCCEEEEE
WSGNGSMKTLRQAEPISLGLPLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTE
ECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDPSMTYRYREQKGFIASVRRDN
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEHHHCCC
LTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSI
CEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
GK
CC
>Mature Secondary Structure 
SEGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMSKGARSKRSNLKGALQPFTPLLLK
CHHHHHHHHHHCCCCCCCHHHHEEHHHHHCEEEEEECCCHHHHHHCCCCCCCCCEEEEE
WSGNGSMKTLRQAEPISLGLPLAGINLYSAMYVNELVGRVLMAEVAMPAFFHDYLHALTE
ECCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHNENPEPALRRFELALLSAMGYGVDFLHCAGTGEAIDPSMTYRYREQKGFIASVRRDN
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEHHHCCC
LTFMGDELIAISERRFITKEQLKAAKRFTRIALKPYLGGKPLKSRELFMPTIALSRARSI
CEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA