| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is surE [H]
Identifier: 218710553
GI number: 218710553
Start: 2790868
End: 2791641
Strand: Reverse
Name: surE [H]
Synonym: VS_2602
Alternate gene names: 218710553
Gene position: 2791641-2790868 (Counterclockwise)
Preceding gene: 218710554
Following gene: 218710552
Centisome position: 84.61
GC content: 45.22
Gene sequence:
>774_bases TTGGCATTGGTACAAAAGAAAGGATACAAGATGAAGATTTTACTCAGCAACGATGATGGTGTGCATGCTCAAGGTATTCA TGAGCTGGCAAATGAATTACGTGATCTTGCTGAAGTTATCATTGTGGCACCTGACCGTAATCGCTCTGGTGCTTCAAATT CATTAACTTTGGAACAGCCTTTGCGTGTTCAAGAGATTGCTAGAAATACCTATTCGGTACAAGGAACACCGACCGACTGT GTACATTTCGCATTGAACGAACTCCTAAAGAGTGACATGCCTGATCTGGTTTTAACGGGTATTAATCACGGAGCTAACCT TGGTGATGACGTGCTTTATTCAGGTACAGTCGCAGCAGCAATGGAAGGCCACTTTTTAGGTGTTCAATCGGTGGCATTTT CTCTGGTTGGAAAACAACATTTTAAGACAGCAGCAGCGGTTGCTCGCCGCATTGTCGAACAACATTTAGCAAACCCAATC CCGACCAATCGCCTGTTAAACGTGAACGTCCCTGACTTAGCATTAGAGCGACTATCGGGTACTCAGGTGACACGTCTAGG TGCTCGTCACCATGCTGAAGATATGATTAAGCAGAAAGACCCACGTGGTCATGATATCTATTGGCTTGGCCCTCCTGGTA AGGAGCAAGATGCTGGTGAAGGTACCGATTTTTACGCCATTGAACATGGTTTTGTGTCGGTAACACCACTACAAGTTGAT CTGACGGCACATGAGTCGTTGGGTGCGATGACTACATGGTTAGGGGATAAATAA
Upstream 100 bases:
>100_bases ATCGTTCGTGAGTTAGTTGAAGAAGTACACGTAGAAAGAACCTACGAGCAATAATGATTCTGCTTGGGTCTAAGTCACTT AATCTTGGAATTTAAGTGAC
Downstream 100 bases:
>100_bases GTGAGTAATCCACAAGCTGAGCGCTTAGTTACTTTTCTGATAGAAAATGGTATTCAGGATCAAAAGGTTCTTGATGCTAT TTACTTACTACCGAGAGAGA
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MALVQKKGYKMKILLSNDDGVHAQGIHELANELRDLAEVIIVAPDRNRSGASNSLTLEQPLRVQEIARNTYSVQGTPTDC VHFALNELLKSDMPDLVLTGINHGANLGDDVLYSGTVAAAMEGHFLGVQSVAFSLVGKQHFKTAAAVARRIVEQHLANPI PTNRLLNVNVPDLALERLSGTQVTRLGARHHAEDMIKQKDPRGHDIYWLGPPGKEQDAGEGTDFYAIEHGFVSVTPLQVD LTAHESLGAMTTWLGDK
Sequences:
>Translated_257_residues MALVQKKGYKMKILLSNDDGVHAQGIHELANELRDLAEVIIVAPDRNRSGASNSLTLEQPLRVQEIARNTYSVQGTPTDC VHFALNELLKSDMPDLVLTGINHGANLGDDVLYSGTVAAAMEGHFLGVQSVAFSLVGKQHFKTAAAVARRIVEQHLANPI PTNRLLNVNVPDLALERLSGTQVTRLGARHHAEDMIKQKDPRGHDIYWLGPPGKEQDAGEGTDFYAIEHGFVSVTPLQVD LTAHESLGAMTTWLGDK >Mature_256_residues ALVQKKGYKMKILLSNDDGVHAQGIHELANELRDLAEVIIVAPDRNRSGASNSLTLEQPLRVQEIARNTYSVQGTPTDCV HFALNELLKSDMPDLVLTGINHGANLGDDVLYSGTVAAAMEGHFLGVQSVAFSLVGKQHFKTAAAVARRIVEQHLANPIP TNRLLNVNVPDLALERLSGTQVTRLGARHHAEDMIKQKDPRGHDIYWLGPPGKEQDAGEGTDFYAIEHGFVSVTPLQVDL TAHESLGAMTTWLGDK
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=245, Percent_Identity=57.1428571428571, Blast_Score=286, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 27964; Mature: 27833
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVQKKGYKMKILLSNDDGVHAQGIHELANELRDLAEVIIVAPDRNRSGASNSLTLEQP CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEHHCC LRVQEIARNTYSVQGTPTDCVHFALNELLKSDMPDLVLTGINHGANLGDDVLYSGTVAAA HHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHCCCCHHHH MEGHFLGVQSVAFSLVGKQHFKTAAAVARRIVEQHLANPIPTNRLLNVNVPDLALERLSG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCC TQVTRLGARHHAEDMIKQKDPRGHDIYWLGPPGKEQDAGEGTDFYAIEHGFVSVTPLQVD CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEE LTAHESLGAMTTWLGDK EECCHHHHHHHHHCCCC >Mature Secondary Structure ALVQKKGYKMKILLSNDDGVHAQGIHELANELRDLAEVIIVAPDRNRSGASNSLTLEQP CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEHHCC LRVQEIARNTYSVQGTPTDCVHFALNELLKSDMPDLVLTGINHGANLGDDVLYSGTVAAA HHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHCCCCHHHH MEGHFLGVQSVAFSLVGKQHFKTAAAVARRIVEQHLANPIPTNRLLNVNVPDLALERLSG HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHCCC TQVTRLGARHHAEDMIKQKDPRGHDIYWLGPPGKEQDAGEGTDFYAIEHGFVSVTPLQVD CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCEEEEEEEEEE LTAHESLGAMTTWLGDK EECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA