| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is ycfX [C]
Identifier: 218710545
GI number: 218710545
Start: 2781490
End: 2782551
Strand: Direct
Name: ycfX [C]
Synonym: VS_2594
Alternate gene names: 218710545
Gene position: 2781490-2782551 (Clockwise)
Preceding gene: 218710544
Following gene: 218710546
Centisome position: 84.31
GC content: 43.69
Gene sequence:
>1062_bases TTGAGCAAGCGAACTAAATCCAAGTGTGTCATTAATCAAATCATGCTCATTAAAGCAGAACCAAATATAGTGATGGGAAT CGCGATTGATTCCCACTCTATTTACTCGGTCGCCAGCACTTCTAACGGACAAGAGGTGTATAGAATGGTGCAGCGCACTC CTGGCGACCTTGCCCACTTGACTCAGCATTTGATAAGCCGAATATCAAGCGTCAGCTACCGCTATGGACGTATCGCCGCG ATAGGCATAAGTGTATCTGAGTTTTTTTTATCTCATCGCCAATCCGCACATAAACTTGCAAAATCAAGTCCTACTCACTC GCCAGAAATCACCCAATTAACACTAAACCTGAATCAGCATTTCAAGGTCGACTGCTCGCTTGTGATGCATTCACACAGTG CGGCCATTGCGTGCGACGCTATTAGTAACGCAATGACGATCGCTGACTTAATTGAACAACCACTCTCGGCAGGTTCAAGT CTAAATAAGAGGGCTAGAGATTTATACAAAGAGGCCATACTCAGCGTATTTTTGGGCGATGGTTGTGGCATAAGTTTTTA TCAAAATAACGAGCAAGTGCACCACCCATTAAGCTCACATTGGGCACATTCAAGGTTGCCTAATTTTCAATGGCTCGTTG ATGGCTTAACTCCTGTATGTCGCTGTGGAAATGAGGCCTGCATTGAACAGTTTTTATCCGCACCAAGTATTGAGCGGCAA TATCATCAAGTCGTGCTAAAAGACCAAACTTTAGCGCAAATTTTTTCAGGCGTAGACCTAAGTGAACCGCATGCATCGCG CATATATCGTACTTATATCGACCAATTGGCGCGCAGTTTAGTTAATCCCATTCAACAATTACTGCCTACACGACTCGTAT TATCAGGCGAAGCAACGACCTATCCTACATTAACGGCAGATTTAAAAGTCGCATTGTCTCGCTACATTCACGTTAATGAA ATTCCAGTGATTATTCACCCAAAACAAGATGAATTCACCTTTGCTCGCGGAGCGTTTCTCATCGCTGAAAAAAATCACAA CAATCATTTACGCTCGTCGTGA
Upstream 100 bases:
>100_bases CGCCGTGGCAATTTAATGTTTGTTCTAAACAACAGCGATAAAGATAAACAGATCATGCTCGATGGAAAATCACTGACCAT TAGCGCTTATGGCTACGTGA
Downstream 100 bases:
>100_bases CAAGAATGGTAACCTTAGAAGGAGAAGATATTGAATAGTTTCAGAGGACAACCCGTGTCAGAGCTAGTCACCAAATTAAT GGATTTTGGGTTTACCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Fructokinase; N-Acetylglucosamine Kinase
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSKRTKSKCVINQIMLIKAEPNIVMGIAIDSHSIYSVASTSNGQEVYRMVQRTPGDLAHLTQHLISRISSVSYRYGRIAA IGISVSEFFLSHRQSAHKLAKSSPTHSPEITQLTLNLNQHFKVDCSLVMHSHSAAIACDAISNAMTIADLIEQPLSAGSS LNKRARDLYKEAILSVFLGDGCGISFYQNNEQVHHPLSSHWAHSRLPNFQWLVDGLTPVCRCGNEACIEQFLSAPSIERQ YHQVVLKDQTLAQIFSGVDLSEPHASRIYRTYIDQLARSLVNPIQQLLPTRLVLSGEATTYPTLTADLKVALSRYIHVNE IPVIIHPKQDEFTFARGAFLIAEKNHNNHLRSS
Sequences:
>Translated_353_residues MSKRTKSKCVINQIMLIKAEPNIVMGIAIDSHSIYSVASTSNGQEVYRMVQRTPGDLAHLTQHLISRISSVSYRYGRIAA IGISVSEFFLSHRQSAHKLAKSSPTHSPEITQLTLNLNQHFKVDCSLVMHSHSAAIACDAISNAMTIADLIEQPLSAGSS LNKRARDLYKEAILSVFLGDGCGISFYQNNEQVHHPLSSHWAHSRLPNFQWLVDGLTPVCRCGNEACIEQFLSAPSIERQ YHQVVLKDQTLAQIFSGVDLSEPHASRIYRTYIDQLARSLVNPIQQLLPTRLVLSGEATTYPTLTADLKVALSRYIHVNE IPVIIHPKQDEFTFARGAFLIAEKNHNNHLRSS >Mature_352_residues SKRTKSKCVINQIMLIKAEPNIVMGIAIDSHSIYSVASTSNGQEVYRMVQRTPGDLAHLTQHLISRISSVSYRYGRIAAI GISVSEFFLSHRQSAHKLAKSSPTHSPEITQLTLNLNQHFKVDCSLVMHSHSAAIACDAISNAMTIADLIEQPLSAGSSL NKRARDLYKEAILSVFLGDGCGISFYQNNEQVHHPLSSHWAHSRLPNFQWLVDGLTPVCRCGNEACIEQFLSAPSIERQY HQVVLKDQTLAQIFSGVDLSEPHASRIYRTYIDQLARSLVNPIQQLLPTRLVLSGEATTYPTLTADLKVALSRYIHVNEI PVIIHPKQDEFTFARGAFLIAEKNHNNHLRSS
Specific function: Unknown
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39330; Mature: 39199
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRTKSKCVINQIMLIKAEPNIVMGIAIDSHSIYSVASTSNGQEVYRMVQRTPGDLAHL CCCCHHHHHHHEEEEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHH TQHLISRISSVSYRYGRIAAIGISVSEFFLSHRQSAHKLAKSSPTHSPEITQLTLNLNQH HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC FKVDCSLVMHSHSAAIACDAISNAMTIADLIEQPLSAGSSLNKRARDLYKEAILSVFLGD EEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC GCGISFYQNNEQVHHPLSSHWAHSRLPNFQWLVDGLTPVCRCGNEACIEQFLSAPSIERQ CCCEEEEECCCHHCCCHHHHHHHHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHH YHQVVLKDQTLAQIFSGVDLSEPHASRIYRTYIDQLARSLVNPIQQLLPTRLVLSGEATT HHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC YPTLTADLKVALSRYIHVNEIPVIIHPKQDEFTFARGAFLIAEKNHNNHLRSS CCCHHHHHHHHHHHHEEECCCEEEECCCCCCCEEECCEEEEEECCCCCCCCCC >Mature Secondary Structure SKRTKSKCVINQIMLIKAEPNIVMGIAIDSHSIYSVASTSNGQEVYRMVQRTPGDLAHL CCCHHHHHHHEEEEEEEECCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCHHHHH TQHLISRISSVSYRYGRIAAIGISVSEFFLSHRQSAHKLAKSSPTHSPEITQLTLNLNQH HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC FKVDCSLVMHSHSAAIACDAISNAMTIADLIEQPLSAGSSLNKRARDLYKEAILSVFLGD EEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC GCGISFYQNNEQVHHPLSSHWAHSRLPNFQWLVDGLTPVCRCGNEACIEQFLSAPSIERQ CCCEEEEECCCHHCCCHHHHHHHHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHH YHQVVLKDQTLAQIFSGVDLSEPHASRIYRTYIDQLARSLVNPIQQLLPTRLVLSGEATT HHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC YPTLTADLKVALSRYIHVNEIPVIIHPKQDEFTFARGAFLIAEKNHNNHLRSS CCCHHHHHHHHHHHHEEECCCEEEECCCCCCCEEECCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA