| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is oadG [H]
Identifier: 218710531
GI number: 218710531
Start: 2762276
End: 2762599
Strand: Reverse
Name: oadG [H]
Synonym: VS_2570
Alternate gene names: 218710531
Gene position: 2762599-2762276 (Counterclockwise)
Preceding gene: 218710532
Following gene: 218710530
Centisome position: 83.73
GC content: 45.06
Gene sequence:
>324_bases ATGGGTCGGGATCACTATTCGCTGAAATCCTGTACGTATGTCAGGATGACGAAGAAAGGAAGCAACATGACTAATATTGG AAGCCTGCTAGGAGATGCGGCGACTCTAATGATAACGGGGATGTCCGTTGTCTTTATTTTCTTAACTATTCTAGTTTACC TCGTTCGGTTGATGTCAAAACTGGTACCAGAAGAAGTACCGGAGCCGATCGCAGCACCTAAAAAAATTCAAAAATCACAA TCAAACCCTTCAGCTGTTAGTCCACAGGTAGTGGCAGCAATTTCGGCCGCGGTTCATCAATACCGTGCGTCTACTGCTAA GTAG
Upstream 100 bases:
>100_bases ATTTATGTGATCTGATAGGCGAATAATTAACCTTATGTGTGCGTTATCCGTAACAGAACCTTAAACAAAATTGACAAACT TTTACCAATCGAGATAATCC
Downstream 100 bases:
>100_bases CATTTAAAGGATTAAAAAGGAGTTTATGAGCATGTCTAAACCACTAGCTATCACAGATGTGGTACTTCGTGACGCGCACC AGTCACTATTTGCTACTCGT
Product: oxaloacetate decarboxylase subunit gamma
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGRDHYSLKSCTYVRMTKKGSNMTNIGSLLGDAATLMITGMSVVFIFLTILVYLVRLMSKLVPEEVPEPIAAPKKIQKSQ SNPSAVSPQVVAAISAAVHQYRASTAK
Sequences:
>Translated_107_residues MGRDHYSLKSCTYVRMTKKGSNMTNIGSLLGDAATLMITGMSVVFIFLTILVYLVRLMSKLVPEEVPEPIAAPKKIQKSQ SNPSAVSPQVVAAISAAVHQYRASTAK >Mature_106_residues GRDHYSLKSCTYVRMTKKGSNMTNIGSLLGDAATLMITGMSVVFIFLTILVYLVRLMSKLVPEEVPEPIAAPKKIQKSQS NPSAVSPQVVAAISAAVHQYRASTAK
Specific function: Lyase and sodium transporter [H]
COG id: COG3630
COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oadG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005899 [H]
Pfam domain/function: PF04277 OAD_gamma [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 11556; Mature: 11425
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDHYSLKSCTYVRMTKKGSNMTNIGSLLGDAATLMITGMSVVFIFLTILVYLVRLMSK CCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPEEVPEPIAAPKKIQKSQSNPSAVSPQVVAAISAAVHQYRASTAK HHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRDHYSLKSCTYVRMTKKGSNMTNIGSLLGDAATLMITGMSVVFIFLTILVYLVRLMSK CCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPEEVPEPIAAPKKIQKSQSNPSAVSPQVVAAISAAVHQYRASTAK HHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]