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The map label for this gene is ndvB [H]

Identifier: 218710475

GI number: 218710475

Start: 2696644

End: 2699049

Strand: Direct

Name: ndvB [H]

Synonym: VS_2514

Alternate gene names: 218710475

Gene position: 2696644-2699049 (Clockwise)

Preceding gene: 218710474

Following gene: 218710476

Centisome position: 81.73

GC content: 47.71

Gene sequence:

>2406_bases
ATGAAATACGGCTATTTCGATAACGATAATCGCGAATACGTCATCACTCGCCCTGATGTACCAGCACCTTGGACCAACTA
CCTAGGTACTGAAAAGTTTTGTACCGTGATTTCGCACAATGCTGGCGGCTACTCGTTCTACAATTCTCCGGAATACAACC
GTGTTACTAAATTCCGTCCAAACGGCACCTTCGACCGTCCAGGACACTATGTTTACCTGCGTGATGATGAGACGGGCGAT
TACTGGTCTATTTCTTGGCAGCCTGTGGCAAAGAGCCTAGATGAAGCGAACTACGAAGTTCGTCACGGCCTGTCATACTC
AAAATTCAAGTGTGAATACAGTGGTATTACAGCAACCAAAACGTTATTCGTTCCTAAGGGTGAAGATGCGGAAGTTTGGG
ACGTCGTGCTGAAAAACAACACTGACAAGCCAAGAACCATCAGCACTTTCTCATTTGTTGAGTTCTCGTTCAGTCATATT
CAATCAGATAACCAGAACCATCAGATGTCTTTGTACTCTGCGGGTACGTCTTACCAAGAAGGTGTTCTTGAATACGACCT
GTACTACAACACTAACGACTTTGAAGGTTTCTACTACCTAGCTTCAACTTTCTCACCAGACAGCTACGACGGCCAACGTG
ATAACTTCCTTGGCATGTACCGTGATGAAGCGAACCCAATTGCCGTTGAGAACGGTAAATGTTCTAACAGCGCCCAAACC
TGTTACAACCACTGTGGTTCTCTGCACAAGCAATTTACGATTCAGCCGGGTGAAGAAGTTCGCTTTGCTTATGTACTCGG
TATCGGTAAAGGCAACGGCGAGCGCCTACGTGAAAAGTACCAAGACACAGCGAACGTCGATGCCGCTTTCCAAGGCATCA
AAGATCACTGGGACGAGCGTTGCAACAAATTCCAAGTTAAGTCTCCAAACGAAGGCTTAGACACCATGATCAACACATGG
ACGCTATACCAAGCCGAAACCTGTGTGGTTTGGTCTCGCTTTGCATCCTTCATTGAAGTGGGTGGTCGTACTGGCCTTGG
TTACCGTGATACTGCGCAAGATGCCATCTCAGTACCTCATGCCAACCCACAAATGACCAAGAAACGTATTATCGACCTGC
TTCGCGGCCAAGTGAAAGCGGGCTACGGTCTACACTTGTTCGATCCAGACTGGTTCGATCCAGAGAAAGCAGACGTTGAA
CCTTCAAAATCACCAACGGTTGTTCCAACACCGTCAGATGACGACAAGATCCACGGCATTGAAGACACCTGTTCTGATGA
TCACTTATGGATCGTTCCGACCATCATCAAGTATGTAATGGAAACAGGTGAACACGACTTCTTTGATGAAGTAATTCCAT
ACGCAGACGGTGGCGAAGCGACCGTTTACGAACACATGAAAGCGGCGCTGAACTTCTCTGCAGAATACGTGGGGCAAACC
GGTATCTGTAAGGGTCTTCGTGCAGACTGGAATGACTGTTTGAACCTTGGTGGCGGTGAATCTTCAATGGTTTCATTCTT
GCATTTCTGGGCTCTACAAGAATTCCTAGATCTTGCTAAGTTCCGTAATAACGATGCTGACGTTGCTAAATACACTGAAA
TGGCTGCGAACGTACGTGAGGCGTGTGAAACGCACCTATGGGATGACGAAGGTGGCTGGTACATCCGTGGTCTAACAAAA
AATGGCGACAAGATCGGTACCGCTCAACAAGCTGAAGGTCGTGTACACCTTGAGTCAAACACGCTAGCGGTTCTATCTGG
CGTGGTTTCTCAAGAGCGTGGCGAGAAAGCGATGGACGCTGTTGATGAGAACCTATTCTCTGAATACGGCTTGCACCTAA
ATTCTCCTTCATTCGCAACACCAAACGATGATATCGGCTTTGTTACTCGCGTTTATCAAGGCGTAAAAGAGAATGGCGCA
ATCTTCTCTCACCCGAACCCATGGGCTTGGGTAGCAGAAGCGAAGCTAGGTCGTGGTGACCGTGCGATGAAGTTCTACGA
CGCACTGAACCCGTACAACCAAAACGACATGATTGAAACACGTTACGCAGAACCATACTCGTACGTGCAGTTCATCATGG
GTAAAGATCATCAAGACCATGGTCGTGCAAACCACCCTTGGTTAACGGGTACCTCTGGTTGGGCTTACTTCGCGGTAACC
AACTTTATTCTTGGTGTTCGCACAGGCTTTGAAGGATTAACAGTCGATCCTTGTATCCCGACTGATTGGCCGGAATTCAA
GGTTACTCGTCAATGGCGTGGCGCGACTTACAACATCACAGTGCAAAACCCGAATGCAGTAAGCAAAGGGGTTACCTCTA
TCACTATCAACGGTGAGTCAGTTGAAGGTGCAATCCCAGTACAAGCAGAAGGCAGCGTGAACGATGTTGTCGTTGTTCTA
GGCTAG

Upstream 100 bases:

>100_bases
GTACTTGCTTCCCCTGATTAAGGTGCTCAGTCAGATTCGACTCAGCATCATTATTTAAAAATTAGCTGCATAGATGCAGT
TTGTTAAAAAGGAAATGACA

Downstream 100 bases:

>100_bases
TCACTTAATTTAACGAACAGCTCTTGCCTCAAGTCTTTATCGACTTGAGGCAATGAGACTAAAAGGATTTTCTAATGATT
AAATTTGGTACAGGTGGCTG

Product: cellobiose phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRPNGTFDRPGHYVYLRDDETGD
YWSISWQPVAKSLDEANYEVRHGLSYSKFKCEYSGITATKTLFVPKGEDAEVWDVVLKNNTDKPRTISTFSFVEFSFSHI
QSDNQNHQMSLYSAGTSYQEGVLEYDLYYNTNDFEGFYYLASTFSPDSYDGQRDNFLGMYRDEANPIAVENGKCSNSAQT
CYNHCGSLHKQFTIQPGEEVRFAYVLGIGKGNGERLREKYQDTANVDAAFQGIKDHWDERCNKFQVKSPNEGLDTMINTW
TLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHANPQMTKKRIIDLLRGQVKAGYGLHLFDPDWFDPEKADVE
PSKSPTVVPTPSDDDKIHGIEDTCSDDHLWIVPTIIKYVMETGEHDFFDEVIPYADGGEATVYEHMKAALNFSAEYVGQT
GICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFLDLAKFRNNDADVAKYTEMAANVREACETHLWDDEGGWYIRGLTK
NGDKIGTAQQAEGRVHLESNTLAVLSGVVSQERGEKAMDAVDENLFSEYGLHLNSPSFATPNDDIGFVTRVYQGVKENGA
IFSHPNPWAWVAEAKLGRGDRAMKFYDALNPYNQNDMIETRYAEPYSYVQFIMGKDHQDHGRANHPWLTGTSGWAYFAVT
NFILGVRTGFEGLTVDPCIPTDWPEFKVTRQWRGATYNITVQNPNAVSKGVTSITINGESVEGAIPVQAEGSVNDVVVVL
G

Sequences:

>Translated_801_residues
MKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRPNGTFDRPGHYVYLRDDETGD
YWSISWQPVAKSLDEANYEVRHGLSYSKFKCEYSGITATKTLFVPKGEDAEVWDVVLKNNTDKPRTISTFSFVEFSFSHI
QSDNQNHQMSLYSAGTSYQEGVLEYDLYYNTNDFEGFYYLASTFSPDSYDGQRDNFLGMYRDEANPIAVENGKCSNSAQT
CYNHCGSLHKQFTIQPGEEVRFAYVLGIGKGNGERLREKYQDTANVDAAFQGIKDHWDERCNKFQVKSPNEGLDTMINTW
TLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHANPQMTKKRIIDLLRGQVKAGYGLHLFDPDWFDPEKADVE
PSKSPTVVPTPSDDDKIHGIEDTCSDDHLWIVPTIIKYVMETGEHDFFDEVIPYADGGEATVYEHMKAALNFSAEYVGQT
GICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFLDLAKFRNNDADVAKYTEMAANVREACETHLWDDEGGWYIRGLTK
NGDKIGTAQQAEGRVHLESNTLAVLSGVVSQERGEKAMDAVDENLFSEYGLHLNSPSFATPNDDIGFVTRVYQGVKENGA
IFSHPNPWAWVAEAKLGRGDRAMKFYDALNPYNQNDMIETRYAEPYSYVQFIMGKDHQDHGRANHPWLTGTSGWAYFAVT
NFILGVRTGFEGLTVDPCIPTDWPEFKVTRQWRGATYNITVQNPNAVSKGVTSITINGESVEGAIPVQAEGSVNDVVVVL
G
>Mature_801_residues
MKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRPNGTFDRPGHYVYLRDDETGD
YWSISWQPVAKSLDEANYEVRHGLSYSKFKCEYSGITATKTLFVPKGEDAEVWDVVLKNNTDKPRTISTFSFVEFSFSHI
QSDNQNHQMSLYSAGTSYQEGVLEYDLYYNTNDFEGFYYLASTFSPDSYDGQRDNFLGMYRDEANPIAVENGKCSNSAQT
CYNHCGSLHKQFTIQPGEEVRFAYVLGIGKGNGERLREKYQDTANVDAAFQGIKDHWDERCNKFQVKSPNEGLDTMINTW
TLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPHANPQMTKKRIIDLLRGQVKAGYGLHLFDPDWFDPEKADVE
PSKSPTVVPTPSDDDKIHGIEDTCSDDHLWIVPTIIKYVMETGEHDFFDEVIPYADGGEATVYEHMKAALNFSAEYVGQT
GICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFLDLAKFRNNDADVAKYTEMAANVREACETHLWDDEGGWYIRGLTK
NGDKIGTAQQAEGRVHLESNTLAVLSGVVSQERGEKAMDAVDENLFSEYGLHLNSPSFATPNDDIGFVTRVYQGVKENGA
IFSHPNPWAWVAEAKLGRGDRAMKFYDALNPYNQNDMIETRYAEPYSYVQFIMGKDHQDHGRANHPWLTGTSGWAYFAVT
NFILGVRTGFEGLTVDPCIPTDWPEFKVTRQWRGATYNITVQNPNAVSKGVTSITINGESVEGAIPVQAEGSVNDVVVVL
G

Specific function: Involved in the production of beta-(1,2)-glucan. It is involved not only in invasion but also in bacteroid development [H]

COG id: COG3459

COG function: function code G; Cellobiose phosphorylase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens ChvB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR009342
- InterPro:   IPR019282
- InterPro:   IPR021478
- InterPro:   IPR011013
- InterPro:   IPR010383
- InterPro:   IPR010403 [H]

Pfam domain/function: PF06204 CBM_X; PF10091 DUF2329; PF11329 DUF3131; PF06165 Glyco_transf_36; PF06205 GT36_AF [H]

EC number: NA

Molecular weight: Translated: 90216; Mature: 90216

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRP
CCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCEEEECC
NGTFDRPGHYVYLRDDETGDYWSISWQPVAKSLDEANYEVRHGLSYSKFKCEYSGITATK
CCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCEEEE
TLFVPKGEDAEVWDVVLKNNTDKPRTISTFSFVEFSFSHIQSDNQNHQMSLYSAGTSYQE
EEEECCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCCHHC
GVLEYDLYYNTNDFEGFYYLASTFSPDSYDGQRDNFLGMYRDEANPIAVENGKCSNSAQT
CCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
CYNHCGSLHKQFTIQPGEEVRFAYVLGIGKGNGERLREKYQDTANVDAAFQGIKDHWDER
HHHHHHHHHHEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
CNKFQVKSPNEGLDTMINTWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPH
HCEEEECCCCCCHHHHHHEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
ANPQMTKKRIIDLLRGQVKAGYGLHLFDPDWFDPEKADVEPSKSPTVVPTPSDDDKIHGI
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
EDTCSDDHLWIVPTIIKYVMETGEHDFFDEVIPYADGGEATVYEHMKAALNFSAEYVGQT
CCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCC
GICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFLDLAKFRNNDADVAKYTEMAANVRE
HHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ACETHLWDDEGGWYIRGLTKNGDKIGTAQQAEGRVHLESNTLAVLSGVVSQERGEKAMDA
HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHH
VDENLFSEYGLHLNSPSFATPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAEAKLGRGD
HHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCC
RAMKFYDALNPYNQNDMIETRYAEPYSYVQFIMGKDHQDHGRANHPWLTGTSGWAYFAVT
HHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEHHHHH
NFILGVRTGFEGLTVDPCIPTDWPEFKVTRQWRGATYNITVQNPNAVSKGVTSITINGES
HHHHHHHCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCEEEEEECCC
VEGAIPVQAEGSVNDVVVVLG
CCCEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MKYGYFDNDNREYVITRPDVPAPWTNYLGTEKFCTVISHNAGGYSFYNSPEYNRVTKFRP
CCCCCCCCCCCEEEEECCCCCCCHHHHCCCHHHHHEEECCCCCCCCCCCCCCCCEEEECC
NGTFDRPGHYVYLRDDETGDYWSISWQPVAKSLDEANYEVRHGLSYSKFKCEYSGITATK
CCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCEEEE
TLFVPKGEDAEVWDVVLKNNTDKPRTISTFSFVEFSFSHIQSDNQNHQMSLYSAGTSYQE
EEEECCCCCCCEEEEEEECCCCCCCEEEEEHHHHHHHHHHCCCCCCCEEEEEECCCCHHC
GVLEYDLYYNTNDFEGFYYLASTFSPDSYDGQRDNFLGMYRDEANPIAVENGKCSNSAQT
CCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCHHHH
CYNHCGSLHKQFTIQPGEEVRFAYVLGIGKGNGERLREKYQDTANVDAAFQGIKDHWDER
HHHHHHHHHHEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
CNKFQVKSPNEGLDTMINTWTLYQAETCVVWSRFASFIEVGGRTGLGYRDTAQDAISVPH
HCEEEECCCCCCHHHHHHEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
ANPQMTKKRIIDLLRGQVKAGYGLHLFDPDWFDPEKADVEPSKSPTVVPTPSDDDKIHGI
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
EDTCSDDHLWIVPTIIKYVMETGEHDFFDEVIPYADGGEATVYEHMKAALNFSAEYVGQT
CCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHCCCC
GICKGLRADWNDCLNLGGGESSMVSFLHFWALQEFLDLAKFRNNDADVAKYTEMAANVRE
HHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
ACETHLWDDEGGWYIRGLTKNGDKIGTAQQAEGRVHLESNTLAVLSGVVSQERGEKAMDA
HHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHH
VDENLFSEYGLHLNSPSFATPNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAEAKLGRGD
HHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCC
RAMKFYDALNPYNQNDMIETRYAEPYSYVQFIMGKDHQDHGRANHPWLTGTSGWAYFAVT
HHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCEEHHHHH
NFILGVRTGFEGLTVDPCIPTDWPEFKVTRQWRGATYNITVQNPNAVSKGVTSITINGES
HHHHHHHCCCCCCEECCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCEEEEEECCC
VEGAIPVQAEGSVNDVVVVLG
CCCEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2154461; 11481430 [H]