| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is glmM [H]
Identifier: 218710476
GI number: 218710476
Start: 2699124
End: 2700536
Strand: Direct
Name: glmM [H]
Synonym: VS_2515
Alternate gene names: 218710476
Gene position: 2699124-2700536 (Clockwise)
Preceding gene: 218710475
Following gene: 218710486
Centisome position: 81.81
GC content: 44.16
Gene sequence:
>1413_bases ATGATTAAATTTGGTACAGGTGGCTGGCGCGCTTTCATTGGTGAAGAGTTCACCAGAGACAATGTTCGCCTTGTAGCGCA AGCGCTCGCTAACATCATCAATAATGAAGATGCAGCCAAGAATGGCTTCGTTATTGGCTATGACCGTCGCTTCCTTTCAG ATAAAGCGGCATGCTGGTTTGCAGAAGTACTTGCGGCGAACAACATCAAAGTAAGCTTCATTGATAAGTTCGTTCCAACA CCTATCGTGATGTTCCAAGCAAAAGAGATGGGATGTATTTACTCTGCGTGTATTACCGCTTCTCACAACCCAGCGGACTA TAACGGCATAAAGATCTTCATTGAAGGTGGACGCGATGCTGACGAGATCATCACAGAGAAGATCGAACAGCAAATCGCAA CACTGACCAACGAAGATGTTATACGAGTCGATTTTGAACAAGCGTTAAACGACAAAGAAATCGAGATCATCAACCCGATG AACGACTTTGTTGATTCAATCATCAACTTCATCGATATCGATTCGATTAAGAAAGCCAACCTGCGCGTACTGATTGATCC AATGTTTGGTGTTGCGAAAAATGCTCTGCAAACCGTACTGATCAACGGTCGCTGTGATGTCGACGTAATCAACGATGGTA AGAACCCAGATTTCGGCGGTCTTATGCCGTCCCCAAATGCAGCAACGCTATACCGCCTAAAACATTTAGTGGCAGCTGAA GGCTATGACATTGGTATTGGTACTGATGGCGATGCCGACCGTTTAGGCATCATTGATGAGAAAGGTCACTTTATTCATCC TAACGAAGTGCTACTACTACTTTACTACTACTTACTGGAATACAAAGGCTGGAAGGGCTCTGTCGTTCGTAACATCGCCA CCACGCATCTACTCGACAAAGTAGCGGCAGATCATGGTGAGAAGAGCTTTGAGGTTCCTGTAGGCTTTAAGCATATCAGC TCTCAAATGGAAGCAGATGATTCACTGATTGGTGGTGAAAGCTCGGGAGGTTTAACCATTCGAGGTCATATCAAAGGTAA GGATGGCGTATTTGCTTCAAGCTTACTGGTTGAGATGATCAGTGTAACAGGTAAAAAGTTATCTGAGTTACTTGATGAAA TCTACTCTAAGTATGGCTATGCCTACACGGCAGAAGGAGATTGCCAGTTTAAGCCTTCAGAGAAAGAAGCGCTCTACACC AAGATTTACGTAGAGAAGCAACTGCCTGAATTTGAATACGAAATTGAAAAAGTTAGCTATGAAGATGGTGCCAAAGTGTA CTTCAAGAATGGCGGATGGGTCATTGCTCGCTTCTCCGGAACAGAGCCGTTACTGCGAATCTTCGCAGAAATGGAAGATA AAGACACTGCAGAACGTGTTCTTCAAAAAGTGAAAGACTTCCTCTCTCTATAG
Upstream 100 bases:
>100_bases ACGATGTTGTCGTTGTTCTAGGCTAGTCACTTAATTTAACGAACAGCTCTTGCCTCAAGTCTTTATCGACTTGAGGCAAT GAGACTAAAAGGATTTTCTA
Downstream 100 bases:
>100_bases ATTTATAGAGTGCAGCAGTTTTGAATGGGACTTAACAAACCACTGCCTTGTTAAAGCCTGTAGGTGAAGAACTCTTGCCC AGTACTCTGTATCAAAGTGC
Product: putative phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MIKFGTGGWRAFIGEEFTRDNVRLVAQALANIINNEDAAKNGFVIGYDRRFLSDKAACWFAEVLAANNIKVSFIDKFVPT PIVMFQAKEMGCIYSACITASHNPADYNGIKIFIEGGRDADEIITEKIEQQIATLTNEDVIRVDFEQALNDKEIEIINPM NDFVDSIINFIDIDSIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPNAATLYRLKHLVAAE GYDIGIGTDGDADRLGIIDEKGHFIHPNEVLLLLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKSFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLDEIYSKYGYAYTAEGDCQFKPSEKEALYT KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKDTAERVLQKVKDFLSL
Sequences:
>Translated_470_residues MIKFGTGGWRAFIGEEFTRDNVRLVAQALANIINNEDAAKNGFVIGYDRRFLSDKAACWFAEVLAANNIKVSFIDKFVPT PIVMFQAKEMGCIYSACITASHNPADYNGIKIFIEGGRDADEIITEKIEQQIATLTNEDVIRVDFEQALNDKEIEIINPM NDFVDSIINFIDIDSIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPNAATLYRLKHLVAAE GYDIGIGTDGDADRLGIIDEKGHFIHPNEVLLLLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKSFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLDEIYSKYGYAYTAEGDCQFKPSEKEALYT KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKDTAERVLQKVKDFLSL >Mature_470_residues MIKFGTGGWRAFIGEEFTRDNVRLVAQALANIINNEDAAKNGFVIGYDRRFLSDKAACWFAEVLAANNIKVSFIDKFVPT PIVMFQAKEMGCIYSACITASHNPADYNGIKIFIEGGRDADEIITEKIEQQIATLTNEDVIRVDFEQALNDKEIEIINPM NDFVDSIINFIDIDSIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPNAATLYRLKHLVAAE GYDIGIGTDGDADRLGIIDEKGHFIHPNEVLLLLYYYLLEYKGWKGSVVRNIATTHLLDKVAADHGEKSFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLDEIYSKYGYAYTAEGDCQFKPSEKEALYT KIYVEKQLPEFEYEIEKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKDTAERVLQKVKDFLSL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=488, Percent_Identity=25.4098360655738, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI290463102, Length=488, Percent_Identity=25.4098360655738, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI133922562, Length=514, Percent_Identity=24.5136186770428, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI31377548, Length=548, Percent_Identity=25.9124087591241, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI290463104, Length=311, Percent_Identity=25.7234726688103, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI63055049, Length=526, Percent_Identity=22.8136882129278, Blast_Score=79, Evalue=1e-14, Organism=Escherichia coli, GI1786904, Length=487, Percent_Identity=26.2833675564682, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1788361, Length=451, Percent_Identity=24.8337028824834, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789566, Length=481, Percent_Identity=23.0769230769231, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17535441, Length=498, Percent_Identity=25.7028112449799, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71993870, Length=537, Percent_Identity=22.3463687150838, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71993878, Length=208, Percent_Identity=29.8076923076923, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323752, Length=536, Percent_Identity=26.865671641791, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6322722, Length=428, Percent_Identity=26.6355140186916, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323934, Length=407, Percent_Identity=24.3243243243243, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI17864244, Length=499, Percent_Identity=28.0561122244489, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI20129809, Length=524, Percent_Identity=26.1450381679389, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24651977, Length=422, Percent_Identity=26.5402843601896, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI24653722, Length=372, Percent_Identity=24.4623655913978, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52348; Mature: 52348
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFGTGGWRAFIGEEFTRDNVRLVAQALANIINNEDAAKNGFVIGYDRRFLSDKAACWF CCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCHHHHHH AEVLAANNIKVSFIDKFVPTPIVMFQAKEMGCIYSACITASHNPADYNGIKIFIEGGRDA HHHHHCCCCEEEEEHHHCCCCEEEEECHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCCH DEIITEKIEQQIATLTNEDVIRVDFEQALNDKEIEIINPMNDFVDSIINFIDIDSIKKAN HHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPNAATLYRLKHLVAAE EEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GYDIGIGTDGDADRLGIIDEKGHFIHPNEVLLLLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCCCEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAADHGEKSFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCCEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLDEIYSKYGYAYTAEGDCQFKPSEKEALYTKIYVEKQLPEFEYEIEKVSY HHHHHHHHHHHHHHHHHHCEEEECCCCCEECCCCHHHEEEEEEEECCCCCHHHHHHEECC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKDTAERVLQKVKDFLSL CCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKFGTGGWRAFIGEEFTRDNVRLVAQALANIINNEDAAKNGFVIGYDRRFLSDKAACWF CCEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHCCHHHHHH AEVLAANNIKVSFIDKFVPTPIVMFQAKEMGCIYSACITASHNPADYNGIKIFIEGGRDA HHHHHCCCCEEEEEHHHCCCCEEEEECHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCCH DEIITEKIEQQIATLTNEDVIRVDFEQALNDKEIEIINPMNDFVDSIINFIDIDSIKKAN HHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPNAATLYRLKHLVAAE EEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCC GYDIGIGTDGDADRLGIIDEKGHFIHPNEVLLLLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCCCEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VAADHGEKSFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCCEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLDEIYSKYGYAYTAEGDCQFKPSEKEALYTKIYVEKQLPEFEYEIEKVSY HHHHHHHHHHHHHHHHHHCEEEECCCCCEECCCCHHHEEEEEEEECCCCCHHHHHHEECC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMEDKDTAERVLQKVKDFLSL CCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]