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The map label for this gene is yhiU [C]

Identifier: 218710461

GI number: 218710461

Start: 2675618

End: 2676742

Strand: Reverse

Name: yhiU [C]

Synonym: VS_2500

Alternate gene names: 218710461

Gene position: 2676742-2675618 (Counterclockwise)

Preceding gene: 218710462

Following gene: 218710460

Centisome position: 81.13

GC content: 47.82

Gene sequence:

>1125_bases
ATGCCCACTCTATTTTCTAACTCTCCATTTTTTCAGAAACTGAAGCAGCCGTGGTTGGTTTCTCTGGTTCTAGTTGTACT
GTTGTCGATTTGGCTTGGTTTAGGAGTGGGGCAAGCGGAAGAGTCACCAGCAAAAAAAGCGACAGAAATTCCGCTGGCTA
AGGTTTCCTTTCAAACATTCACTTCATCCCCCACCTTTAAAACCATAGATCTTTATGGTCGCACAGCACCCGATAGGCAT
GCTCGATTGGGAGCGGAAGTCGCGGGCAAGATTGTTAGGTTGAACGTTGTGAAAGGCGATACGGTTAAAGTAGGGCAAGC
CATTGCTCAGATAGATAAAGGTGACTTAGAGATTCAGCTAGAGCGAGCTTCGGCTTTATATCGATTGAAGCAGAAAGAAT
TTAAGGCGGCGCAGTCGCTGAAAAAAAGAGGGCTGCAAGGCGAGATCGCCTACACCACAGCTGAGGCTTCGTTAACTGAA
GCGAAGGCTATGAAGCGTAATGCTGAACTGGCTCTAAAAAATACAGTCATCACATCGCCTTTCTCCGGTGTGGTTCAAGA
TTTGATGGTGGAGCTCGGTGATTTCGTTGGTGTTGGCGATCCTGTTGCTGGCGTGATTGACCTCGATCCTTTGGTTATTG
AGGCCGATGTCAGTGAGCGTCATATCCAGCATTTGCTAGTCAATCAATCAGCTTTGGTTCGCCTGTTAGGGAGAGAAGAA
GCGGAAGGTCGGCTGCGTTACGTCTCTCGAATCTCTTCTGCCTCAACCAATACCTTCCCTATTGAGATTGAAATCGACAA
CTCAGATGGCCTGTTACCTGCGGGTGTTAGTGCTGAAGTCACCCTTAATCTAGAAACAAGAGACGCTATCAAAGTGACGC
CTGCCATGTTGGCACTGGATGAGGCCGGTAATCTTGGGGTCAAAACTTTGGTTTCAATTGACGACTCACCAATCGTGAAA
TTTGTCGGCATTCAACTGGTGAAAGCTGAGCAAGATGGAGTGTGGCTGACGGGGTTAGGTCAGCGTGTCGATATCATCAC
TGTGGGGCAAGGTTTTGTTCGTGATGGTGACTCGGTGATTGCTGTTGAGCAAGGTGTTGAACTCTCTAACGTAACTGCAG
AGTAG

Upstream 100 bases:

>100_bases
CTGTGGGTCTGTTAAGGTTACCTCTGTGCATCAGGATGTTGCATATGACGGTGTTAAGCTAATTAGCGCGCCTTAATCAC
ATCGGACAAAAGGATTTGCT

Downstream 100 bases:

>100_bases
GAGATAACCGATGTATTCAATTATTGATGCAGCCTTGTCTCGCGCTCGAACAATGCTCTCTCTTTTGGCACTCATATTGG
TCGCAGGTGTCGTTACCTAT

Product: membrane-fusion protein AcrA

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Membrane-Fusion Protein; Efflux Transporter; Efflux Transporter Rnd Family Mfp Subunit; Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Cation Efflux System Protein; RND Efflux Membrane Fusion Protein; Transporter Protein; RND Efflux System Membrane Fusion Protein; NolF Secretion Protein; Efflux Transporter MFP Component RND Family; Efflux Transporter Component; Multidrug RND Transporter Membrane Fusion Protein; Acriflavine Resistance Protein E; Component Of Multidrug Efflux System; Multidrug Efflux Transporter VexE; Macrolide-Specific ABC-Type Efflux Protein; Efflux System Protein; Heavy Metal Cation Tricomponent Efflux Protein HmxB; Multidrug ABC Transporter; Periplasmic Component Of Efflux System; Nodulation Protein; HlyD-Family Secretion Protein; Membrane Fusion Protein; Multidrug Efflux Protein; Co/Zn/Cd Efflux System Membrane Fusion Protein; Auxiliary Transport Protein MFP Family; Multidrug Efflux System Inner Membrane Protein; HlyD-Like Secretion Protein; Periplasmic Linker Protein; Membrane-Fusion Protein AcrA; AcrA/AcrE Family Protein; Hlyd Family Secretion Protein; Multidrug Resistance Protein; Secretion Protein Family Hlyd; Acriflavin Resistance Protein B; RND Efflux Membrane-Fusionprotein; Periplasmic Multidrug Efflux Lipoprotein; RND Family Efflux Transporter; Efflux System

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MPTLFSNSPFFQKLKQPWLVSLVLVVLLSIWLGLGVGQAEESPAKKATEIPLAKVSFQTFTSSPTFKTIDLYGRTAPDRH
ARLGAEVAGKIVRLNVVKGDTVKVGQAIAQIDKGDLEIQLERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASLTE
AKAMKRNAELALKNTVITSPFSGVVQDLMVELGDFVGVGDPVAGVIDLDPLVIEADVSERHIQHLLVNQSALVRLLGREE
AEGRLRYVSRISSASTNTFPIEIEIDNSDGLLPAGVSAEVTLNLETRDAIKVTPAMLALDEAGNLGVKTLVSIDDSPIVK
FVGIQLVKAEQDGVWLTGLGQRVDIITVGQGFVRDGDSVIAVEQGVELSNVTAE

Sequences:

>Translated_374_residues
MPTLFSNSPFFQKLKQPWLVSLVLVVLLSIWLGLGVGQAEESPAKKATEIPLAKVSFQTFTSSPTFKTIDLYGRTAPDRH
ARLGAEVAGKIVRLNVVKGDTVKVGQAIAQIDKGDLEIQLERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASLTE
AKAMKRNAELALKNTVITSPFSGVVQDLMVELGDFVGVGDPVAGVIDLDPLVIEADVSERHIQHLLVNQSALVRLLGREE
AEGRLRYVSRISSASTNTFPIEIEIDNSDGLLPAGVSAEVTLNLETRDAIKVTPAMLALDEAGNLGVKTLVSIDDSPIVK
FVGIQLVKAEQDGVWLTGLGQRVDIITVGQGFVRDGDSVIAVEQGVELSNVTAE
>Mature_373_residues
PTLFSNSPFFQKLKQPWLVSLVLVVLLSIWLGLGVGQAEESPAKKATEIPLAKVSFQTFTSSPTFKTIDLYGRTAPDRHA
RLGAEVAGKIVRLNVVKGDTVKVGQAIAQIDKGDLEIQLERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASLTEA
KAMKRNAELALKNTVITSPFSGVVQDLMVELGDFVGVGDPVAGVIDLDPLVIEADVSERHIQHLLVNQSALVRLLGREEA
EGRLRYVSRISSASTNTFPIEIEIDNSDGLLPAGVSAEVTLNLETRDAIKVTPAMLALDEAGNLGVKTLVSIDDSPIVKF
VGIQLVKAEQDGVWLTGLGQRVDIITVGQGFVRDGDSVIAVEQGVELSNVTAE

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Attached To The Inner Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40235; Mature: 40104

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLFSNSPFFQKLKQPWLVSLVLVVLLSIWLGLGVGQAEESPAKKATEIPLAKVSFQTF
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEEEEE
TSSPTFKTIDLYGRTAPDRHARLGAEVAGKIVRLNVVKGDTVKVGQAIAQIDKGDLEIQL
CCCCCEEEEEECCCCCCHHHHHCCHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEE
ERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASLTEAKAMKRNAELALKNTVITSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCEEEECEEECCC
FSGVVQDLMVELGDFVGVGDPVAGVIDLDPLVIEADVSERHIQHLLVNQSALVRLLGREE
HHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCC
AEGRLRYVSRISSASTNTFPIEIEIDNSDGLLPAGVSAEVTLNLETRDAIKVTPAMLALD
CCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCEEEEEEECCCCCEEECHHHEEEC
EAGNLGVKTLVSIDDSPIVKFVGIQLVKAEQDGVWLTGLGQRVDIITVGQGFVRDGDSVI
CCCCCCEEEEEECCCCCCEEEECEEEEEECCCCEEEEECCCEEEEEEECCCEEECCCCEE
AVEQGVELSNVTAE
EEECCCCCCCCCCC
>Mature Secondary Structure 
PTLFSNSPFFQKLKQPWLVSLVLVVLLSIWLGLGVGQAEESPAKKATEIPLAKVSFQTF
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEEEEE
TSSPTFKTIDLYGRTAPDRHARLGAEVAGKIVRLNVVKGDTVKVGQAIAQIDKGDLEIQL
CCCCCEEEEEECCCCCCHHHHHCCHHHCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEE
ERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASLTEAKAMKRNAELALKNTVITSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHCCCCEEEECEEECCC
FSGVVQDLMVELGDFVGVGDPVAGVIDLDPLVIEADVSERHIQHLLVNQSALVRLLGREE
HHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCCHHHHHHHHHHCHHHHHHHHCCCC
AEGRLRYVSRISSASTNTFPIEIEIDNSDGLLPAGVSAEVTLNLETRDAIKVTPAMLALD
CCHHHHHHHHHHCCCCCEEEEEEEECCCCCCEECCCCEEEEEEECCCCCEEECHHHEEEC
EAGNLGVKTLVSIDDSPIVKFVGIQLVKAEQDGVWLTGLGQRVDIITVGQGFVRDGDSVI
CCCCCCEEEEEECCCCCCEEEECEEEEEECCCCEEEEECCCEEEEEEECCCEEECCCCEE
AVEQGVELSNVTAE
EEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA