Click here to switch to the map view.

The map label for this gene is 218710355

Identifier: 218710355

GI number: 218710355

Start: 2557638

End: 2559896

Strand: Direct

Name: 218710355

Synonym: VS_2391

Alternate gene names: NA

Gene position: 2557638-2559896 (Clockwise)

Preceding gene: 218710354

Following gene: 218710356

Centisome position: 77.52

GC content: 44.13

Gene sequence:

>2259_bases
ATGCGTTGGTTATACGTTGTTAGTCTATTCATTTTAAGCTTAAGCACATCGGTTAATGCGTCGGTCTATTCGTCGGCGCT
CCTCAATGAAGCCAATAACTTGGTTGAGATAGAACCGAGTCAAGCAAAACGAATAGCCAACAGCTACCTAACGCTACGTA
TCCTTTCAGATCAACGCGAAAAGAGCCCGTCAGCTATTTCTCGTGAAGAGGCCGACTCTTCGATTAGAACCCCGAACAGC
AGTATCGATGCGTATAAGATCTTAGCGAAAGCAGAGTTTAATCTAGGCAACATTCGTATTGCGATTCAGCACATCGACAA
AGCCTCTGAGCTAGCAAAAACCTATAAGCTTGAGTATCTAAAGTTGGATCTGGAAATACTCAAAGTTAGGTTACTTTGGC
TTACGGACAGAAAATCTGCCCAAGCAGAATCAGAGCTAAAAAAAATAGAAACAAGCTTAGAGTCGGTTAATAAGACCTTA
CGCCTGACGGAAGGAATTACCTATCGCTTAATCATGTTGAAAGCCGACATTTCCTCTTATAACAACAACGTAGGGGAAGC
CGAAAAACTCTATCAAGAAGCAAAAACTTACCTAGAACAGCGTCACTCGGAAAAAGTCGTCATTGATTATCACATCACCG
TCGGCGAGTTTTATCTTACCCATAAAGAGTACAACCATGCACTATCTGAGTTATTGTACGGCTACTGGAAATCAGTAGAA
GGTAACCTGAGTTCGCGCTTGGCCAAAGTAAACCGCCTACTTGCACAGCTTTTCTTTGAACGCCAAGTATTAGATAAAGC
TCTAGAGCACCTGTCTCAAGCTGCTGACTTTTACGATAATTTTGAAAGCTCCCCCATATTAGCGCAAGTACTAAAAAAGA
TGGGGGACGTGTACTTCAATCAAGGCAAATATAACCTTGCCCTCGTGCACTTTTTCAATGTCCTTGATCATGAGAGTACC
GACCGAGACATCCACCAAGTCATTGACATTCGTCTAAGTTTATCTGCGACTTACTTACGACTTTATAACTACCCTCTAGC
TGAGCAATACCTAGCACGGGCCCTTGAACTGCTGGAGTATTCCGACATTCCTAAATTGGAAGGCCGCGCAGCACTCTTAT
CCGCAGGTTTGGCATACCACCTGCAAGAGAGCGAAGATGTAATTAAGCATGCGACACGTGCGCTCGAGATTTCGCGTCAG
GTAGAAAATACGCGCCTGTCGCAACACTCCTACCACTTGCTCTCTTTAGGTTATGAGCAAGCAGGGCGTCCACAACAAGC
GCTAGCAAATCTCAAGCAATACAATATCCTTGTCTCTTTGGAACAACAAAAACTCAACCGTGTTGGTGAAGACGCATTCC
GCCAACAAAAAGAGTTTGCCGAGCAAACGCTCCACTATGCAGGTCAAGAACAAGAATTAGAGAAATACAAACTTGAGCAC
CATAAGTTCCAGAAAATATCGTTCGCCTTATTTTTGTTCAGCATTGTCTTGTTCTTCTTTGTGCTACGCCGAGGCTACAT
CATTCAAACCTTAGTCACGGAAATGGATTCACTGCGTACCGACCTATTCACACACTCACGCTCAAAGCTTCCAAATCTAA
GAATGCTGAACGCAAAGCTATCAAATTCACTAGAACAAACCAGCCAAAACTTCGAACAATGGCAACTTGGTGAGCTGATT
CATGAACCACTCAACGACCGTTTACGCTTTGTGATGATTGATTTGCCGTTCCTACGCAATATGTACACTCAGAACGGTTA
TAAAGCAGGTTTAGAACTCGAAGATGCTTTCGGCGAGTTCCTTAAATCTAAGCTCGAAGGTCCTGCGCGCGTCTACCACT
TCTCGGATGCGAACTTGCTTTATATCGAACCAAATGCTGACCGCGATACATCGCCTGAGGCTATGTTCAGAAAGATTCAA
TCTTGGATTAATCACTTCGAACCAGAGCGAAACATTAATCGAACCGTCCGCATGGGCATCGCTGACTACCCGTTCTTGCC
ACGCGCTTATACCGCGATTAACGACCAAGAGCTGCTCGATGTACTATTAATGTCGACCAATCTGGCACGTGAAATCAGCC
TCAAAGAACGCAGTAGCCAATGGGTTTACCTTAAAGCCATCGACAATGCCCCCGCAGCGAGCCTTGCAACGGGTAACATA
AGAGAGGCTTGTAAACATGCGATTAATCAAGGGTTAATAAAGATACAATCCTCACACCAGAATGAGGACAATATCAAAAA
AATGCTAAAAGATGACTGA

Upstream 100 bases:

>100_bases
GCAAGATAGACCAAGCCACAATAAGCGTATGGCTCGCCAATAATCGGCGTGAACCGCCCACACTTATTTGAACCTACAAA
ATCTTTAAAGGGACATTGAA

Downstream 100 bases:

>100_bases
TTTGCGAGCGGTTAAACGTCGTAGGTCGTGACCTTATTTTTAGTTTTGTTATTATCAAGGTCACGGAATTTCATCTATAC
GATCGAGTACGATCTACGCG

Product: TPR-repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MRWLYVVSLFILSLSTSVNASVYSSALLNEANNLVEIEPSQAKRIANSYLTLRILSDQREKSPSAISREEADSSIRTPNS
SIDAYKILAKAEFNLGNIRIAIQHIDKASELAKTYKLEYLKLDLEILKVRLLWLTDRKSAQAESELKKIETSLESVNKTL
RLTEGITYRLIMLKADISSYNNNVGEAEKLYQEAKTYLEQRHSEKVVIDYHITVGEFYLTHKEYNHALSELLYGYWKSVE
GNLSSRLAKVNRLLAQLFFERQVLDKALEHLSQAADFYDNFESSPILAQVLKKMGDVYFNQGKYNLALVHFFNVLDHEST
DRDIHQVIDIRLSLSATYLRLYNYPLAEQYLARALELLEYSDIPKLEGRAALLSAGLAYHLQESEDVIKHATRALEISRQ
VENTRLSQHSYHLLSLGYEQAGRPQQALANLKQYNILVSLEQQKLNRVGEDAFRQQKEFAEQTLHYAGQEQELEKYKLEH
HKFQKISFALFLFSIVLFFFVLRRGYIIQTLVTEMDSLRTDLFTHSRSKLPNLRMLNAKLSNSLEQTSQNFEQWQLGELI
HEPLNDRLRFVMIDLPFLRNMYTQNGYKAGLELEDAFGEFLKSKLEGPARVYHFSDANLLYIEPNADRDTSPEAMFRKIQ
SWINHFEPERNINRTVRMGIADYPFLPRAYTAINDQELLDVLLMSTNLAREISLKERSSQWVYLKAIDNAPAASLATGNI
REACKHAINQGLIKIQSSHQNEDNIKKMLKDD

Sequences:

>Translated_752_residues
MRWLYVVSLFILSLSTSVNASVYSSALLNEANNLVEIEPSQAKRIANSYLTLRILSDQREKSPSAISREEADSSIRTPNS
SIDAYKILAKAEFNLGNIRIAIQHIDKASELAKTYKLEYLKLDLEILKVRLLWLTDRKSAQAESELKKIETSLESVNKTL
RLTEGITYRLIMLKADISSYNNNVGEAEKLYQEAKTYLEQRHSEKVVIDYHITVGEFYLTHKEYNHALSELLYGYWKSVE
GNLSSRLAKVNRLLAQLFFERQVLDKALEHLSQAADFYDNFESSPILAQVLKKMGDVYFNQGKYNLALVHFFNVLDHEST
DRDIHQVIDIRLSLSATYLRLYNYPLAEQYLARALELLEYSDIPKLEGRAALLSAGLAYHLQESEDVIKHATRALEISRQ
VENTRLSQHSYHLLSLGYEQAGRPQQALANLKQYNILVSLEQQKLNRVGEDAFRQQKEFAEQTLHYAGQEQELEKYKLEH
HKFQKISFALFLFSIVLFFFVLRRGYIIQTLVTEMDSLRTDLFTHSRSKLPNLRMLNAKLSNSLEQTSQNFEQWQLGELI
HEPLNDRLRFVMIDLPFLRNMYTQNGYKAGLELEDAFGEFLKSKLEGPARVYHFSDANLLYIEPNADRDTSPEAMFRKIQ
SWINHFEPERNINRTVRMGIADYPFLPRAYTAINDQELLDVLLMSTNLAREISLKERSSQWVYLKAIDNAPAASLATGNI
REACKHAINQGLIKIQSSHQNEDNIKKMLKDD
>Mature_752_residues
MRWLYVVSLFILSLSTSVNASVYSSALLNEANNLVEIEPSQAKRIANSYLTLRILSDQREKSPSAISREEADSSIRTPNS
SIDAYKILAKAEFNLGNIRIAIQHIDKASELAKTYKLEYLKLDLEILKVRLLWLTDRKSAQAESELKKIETSLESVNKTL
RLTEGITYRLIMLKADISSYNNNVGEAEKLYQEAKTYLEQRHSEKVVIDYHITVGEFYLTHKEYNHALSELLYGYWKSVE
GNLSSRLAKVNRLLAQLFFERQVLDKALEHLSQAADFYDNFESSPILAQVLKKMGDVYFNQGKYNLALVHFFNVLDHEST
DRDIHQVIDIRLSLSATYLRLYNYPLAEQYLARALELLEYSDIPKLEGRAALLSAGLAYHLQESEDVIKHATRALEISRQ
VENTRLSQHSYHLLSLGYEQAGRPQQALANLKQYNILVSLEQQKLNRVGEDAFRQQKEFAEQTLHYAGQEQELEKYKLEH
HKFQKISFALFLFSIVLFFFVLRRGYIIQTLVTEMDSLRTDLFTHSRSKLPNLRMLNAKLSNSLEQTSQNFEQWQLGELI
HEPLNDRLRFVMIDLPFLRNMYTQNGYKAGLELEDAFGEFLKSKLEGPARVYHFSDANLLYIEPNADRDTSPEAMFRKIQ
SWINHFEPERNINRTVRMGIADYPFLPRAYTAINDQELLDVLLMSTNLAREISLKERSSQWVYLKAIDNAPAASLATGNI
REACKHAINQGLIKIQSSHQNEDNIKKMLKDD

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86881; Mature: 86881

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLYVVSLFILSLSTSVNASVYSSALLNEANNLVEIEPSQAKRIANSYLTLRILSDQRE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEEEEECCCCC
KSPSAISREEADSSIRTPNSSIDAYKILAKAEFNLGNIRIAIQHIDKASELAKTYKLEYL
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
KLDLEILKVRLLWLTDRKSAQAESELKKIETSLESVNKTLRLTEGITYRLIMLKADISSY
HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHC
NNNVGEAEKLYQEAKTYLEQRHSEKVVIDYHITVGEFYLTHKEYNHALSELLYGYWKSVE
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECHHEEHHHHHHHHHHHHHHHHHHCCC
GNLSSRLAKVNRLLAQLFFERQVLDKALEHLSQAADFYDNFESSPILAQVLKKMGDVYFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEC
QGKYNLALVHFFNVLDHESTDRDIHQVIDIRLSLSATYLRLYNYPLAEQYLARALELLEY
CCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SDIPKLEGRAALLSAGLAYHLQESEDVIKHATRALEISRQVENTRLSQHSYHLLSLGYEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
AGRPQQALANLKQYNILVSLEQQKLNRVGEDAFRQQKEFAEQTLHYAGQEQELEKYKLEH
CCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HKFQKISFALFLFSIVLFFFVLRRGYIIQTLVTEMDSLRTDLFTHSRSKLPNLRMLNAKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
SNSLEQTSQNFEQWQLGELIHEPLNDRLRFVMIDLPFLRNMYTQNGYKAGLELEDAFGEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHH
LKSKLEGPARVYHFSDANLLYIEPNADRDTSPEAMFRKIQSWINHFEPERNINRTVRMGI
HHHHCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECC
ADYPFLPRAYTAINDQELLDVLLMSTNLAREISLKERSSQWVYLKAIDNAPAASLATGNI
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCH
REACKHAINQGLIKIQSSHQNEDNIKKMLKDD
HHHHHHHHHHCEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRWLYVVSLFILSLSTSVNASVYSSALLNEANNLVEIEPSQAKRIANSYLTLRILSDQRE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHEEEEEECCCCC
KSPSAISREEADSSIRTPNSSIDAYKILAKAEFNLGNIRIAIQHIDKASELAKTYKLEYL
CCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
KLDLEILKVRLLWLTDRKSAQAESELKKIETSLESVNKTLRLTEGITYRLIMLKADISSY
HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHC
NNNVGEAEKLYQEAKTYLEQRHSEKVVIDYHITVGEFYLTHKEYNHALSELLYGYWKSVE
CCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECHHEEHHHHHHHHHHHHHHHHHHCCC
GNLSSRLAKVNRLLAQLFFERQVLDKALEHLSQAADFYDNFESSPILAQVLKKMGDVYFN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEC
QGKYNLALVHFFNVLDHESTDRDIHQVIDIRLSLSATYLRLYNYPLAEQYLARALELLEY
CCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SDIPKLEGRAALLSAGLAYHLQESEDVIKHATRALEISRQVENTRLSQHSYHLLSLGYEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHH
AGRPQQALANLKQYNILVSLEQQKLNRVGEDAFRQQKEFAEQTLHYAGQEQELEKYKLEH
CCCHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HKFQKISFALFLFSIVLFFFVLRRGYIIQTLVTEMDSLRTDLFTHSRSKLPNLRMLNAKL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
SNSLEQTSQNFEQWQLGELIHEPLNDRLRFVMIDLPFLRNMYTQNGYKAGLELEDAFGEF
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHH
LKSKLEGPARVYHFSDANLLYIEPNADRDTSPEAMFRKIQSWINHFEPERNINRTVRMGI
HHHHCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHEECC
ADYPFLPRAYTAINDQELLDVLLMSTNLAREISLKERSSQWVYLKAIDNAPAASLATGNI
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCH
REACKHAINQGLIKIQSSHQNEDNIKKMLKDD
HHHHHHHHHHCEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA