| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is yfeX [H]
Identifier: 218710262
GI number: 218710262
Start: 2467652
End: 2468575
Strand: Reverse
Name: yfeX [H]
Synonym: VS_2295
Alternate gene names: 218710262
Gene position: 2468575-2467652 (Counterclockwise)
Preceding gene: 218710263
Following gene: 218710261
Centisome position: 74.82
GC content: 45.67
Gene sequence:
>924_bases ATGCTTAATGTTTCAAATGAGCAGCCTAACGTTCAAAGTGCTATTTTGCCTGAAGCTGGGCCTTTCGCTCTTTACGTTCA ACTTAAAGTGAACGCTAATACTGCTAATGTACTAGCAGAAATTCAAAAGCTTCCGACTCTAATCGACGAGCTAAACCAAA CTCAACCTGATGCGAACCTAACGGCGTCGGTAGCATTCTCAAAAGCTTTTTGGGATAAGTTTGAGCAAGCTGCTCCCTCT GATCTAATTGATTTTCCTGCGCTTGGTGAAGGTGATATCACAGCACCGAGCACACTGTCTGATGTTCTGATTCACTGTCA TTCAAACCGACATGACCTACACTTCTTCATCCTACGTAAATTGCTATCTGAAGTAGCGGCAGACGTTGAAGTAGTAGATG AAACTTACGGTTACCGTTTCCTAGACTCACGTGACATGACCGATTTCGTTGATGGCACTGAAAACCCGAAAGACGCGCAG CGTGCTGAAGTGGCGATTGTGCCTGAAGGTGAATTCGCAGGTGGTAGCTACGTAATGGTGCAACGTTTTGTGCATAACCT GCCTGCTTGGAATAGATTAAACGTATCGGCACAAGAGAAAGTGGTTGGCCGTACCAAGCCAGATTCAATCGAGCTAGACG ATGTTCCAGCGGCGTCTCACGTTGGCCGTGTGGATATCAAAGAAGAAGGCAAGGGCCTTAAAATTGTTCGTCATAGCCTA CCTTACGGCACAGCAACAGGCGATCACGGTTTACTGTTCATCGCTTACTGTAATGTTCGTCATAATTTCGATGCGATGCT AGAGAGTATGTACGGCGAAACAGATGGCAAAACAGACCAACTGCTTCGCTTTACTAAAGCCGTTACTGGCGCTTACTACT TTGCTCCTTCAGCTGAGATGTTGAGTGCACTAACGATTAAGTAA
Upstream 100 bases:
>100_bases GGGATTGCTTTAAAGTGGTTGAGCACGAAGACTGATTCTCATCAAAACATTTGTACCATTCACAATTATACTTAGAAGCT AAAACTGGAAGGAATAATCT
Downstream 100 bases:
>100_bases GTGCACTCAAATAGAATAAACAAAGGGAGCCTCATGGCTCCTTTTTTTTAAAGTTTTATATAAATAGGTCGATACAAGAG CAATCGTAAGTTTTATTCAT
Product: melanin biosynthesis protein TyrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK
Sequences:
>Translated_307_residues MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK >Mature_307_residues MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANLTASVAFSKAFWDKFEQAAPS DLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRKLLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQ RAEVAIVPEGEFAGGSYVMVQRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEMLSALTIK
Specific function: Unknown
COG id: COG2837
COG function: function code P; Predicted iron-dependent peroxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DyP-type peroxidase family [H]
Homologues:
Organism=Escherichia coli, GI87082102, Length=299, Percent_Identity=47.1571906354515, Blast_Score=264, Evalue=5e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011008 - InterPro: IPR006314 [H]
Pfam domain/function: PF04261 Dyp_perox [H]
EC number: NA
Molecular weight: Translated: 33801; Mature: 33801
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANL CCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC TASVAFSKAFWDKFEQAAPSDLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRK CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH LLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQRAEVAIVPEGEFAGGSYVMV HHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHCEEEEEECCCCCCCHHHHH QRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEEECC PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEM CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCHHH LSALTIK HHHHCCC >Mature Secondary Structure MLNVSNEQPNVQSAILPEAGPFALYVQLKVNANTANVLAEIQKLPTLIDELNQTQPDANL CCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCC TASVAFSKAFWDKFEQAAPSDLIDFPALGEGDITAPSTLSDVLIHCHSNRHDLHFFILRK CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH LLSEVAADVEVVDETYGYRFLDSRDMTDFVDGTENPKDAQRAEVAIVPEGEFAGGSYVMV HHHHHHHHHHHHHHHCCEEEECCCCCHHHHCCCCCCCCHHHCEEEEEECCCCCCCHHHHH QRFVHNLPAWNRLNVSAQEKVVGRTKPDSIELDDVPAASHVGRVDIKEEGKGLKIVRHSL HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCEEECCCCCCEEEEEECC PYGTATGDHGLLFIAYCNVRHNFDAMLESMYGETDGKTDQLLRFTKAVTGAYYFAPSAEM CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCHHH LSALTIK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]