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The map label for this gene is flaF [H]

Identifier: 218710261

GI number: 218710261

Start: 2466398

End: 2467531

Strand: Reverse

Name: flaF [H]

Synonym: VS_2294

Alternate gene names: 218710261

Gene position: 2467531-2466398 (Counterclockwise)

Preceding gene: 218710262

Following gene: 218710260

Centisome position: 74.79

GC content: 46.3

Gene sequence:

>1134_bases
ATGGCAATAACTGTTAATACGAATGCTTCAGCATTAGTGGCTCAGAGGAATCTCTCTAATGCCAATAACATGCTGAACCA
ATCTTTGGAGCGCTTGGCTTCAGGGAGTCGTATTAATAGTGCAAAAGACGATGCTGCTGGCTTACAAATCTCCAATCGAT
TAGAAGCACAGATGAGCGGCATCGATGTTGCGGTTCGAAATGCTAACGACGGTATCTCCATTATGCAGACAGCAGAAGGG
GCGATGAATGAAACCACCAATATCATGCAACGCATGCGAGACCTGTCACTGCAAGCGACTAATGGTTCGAATGGCCAATC
GGAAAGGACGGCTATTCAAGAAGAAGTAACCGCCTTAAATGATGAGTTGAACCGAATTGCGGAAACCACTTCATTTGGTG
GGAAAAAGCTCCTTAACGGCAGTTTTGGTAGCTCGTCATTTCAAATCGGTGGTAGCTCTGGTGAGGCGGTGCAGATAGGT
TTGAAAAACATGCGCACCGATGATATCAACATGGGCGGCTTTAGCTATGTTGCCAATGGCATGGCAAGTGACTCGTGGGA
AGTTAAATCCAACCAGACAGATATGACGATGGCGTTTACCGATCGTTTTGGTCAGCCTCAAGAGATCAACATTAATGCCA
AGGCGGGCGATGACATTGAAGAGCTAGCGACTTATATCAATGGTCAAACGGATCTGGTTTCGGCTTCCGTCAATGATGAA
GGGCAGCTTCAGATCTACATGTCAGGCGAAGACACGGCAGGCACGATCTCTTTCTCAGGCTCGTTAGCCAGTGAGCTTTC
GATGTCGGCGGGTTATTACGAGTCAGTCGATGATATTAATGTCACTGATGTTGGTGGAGCACAGCGCGCCGTGTCTATTT
TGGATACAGCGATGAAGTATGTTGATAGTCACCGTTCTGAACTCGGGGCGATGCAAAACCGCTTTGATCATGCGATTAAT
AACCTTGAAAATGTTCATGAGAACTTGGGGGCATCAAACAGTCGAATCAAAGATACAGACTACGCCAAAGAAACCACTCA
AATGCTCAAACAACAAATACTGCAGCAAGTCAGTACCACTATTTTAGCTCAAGCTAAGCAAGCGCCGAACTTAGCTTTAA
CGCTGCTAGGCTAA

Upstream 100 bases:

>100_bases
CAAAGGGAGCCTCATGGCTCCTTTTTTTTAAAGTTTTATATAAATAGGTCGATACAAGAGCAATCGTAAGTTTTATTCAT
CTTTTTGTAAGTGAAGGTCT

Downstream 100 bases:

>100_bases
TAAATTAGGTCAATTCTTATAAAGGTATTCTCGGTTAACTAAAGTCCTTTGGTTAATTAAAATACAATATTTCCCCCGGC
TGACTTTTCGACAACTTTAG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MAITVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGISIMQTAEG
AMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALNDELNRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIG
LKNMRTDDINMGGFSYVANGMASDSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDE
GQLQIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQNRFDHAIN
NLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLALTLLG

Sequences:

>Translated_377_residues
MAITVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGISIMQTAEG
AMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALNDELNRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIG
LKNMRTDDINMGGFSYVANGMASDSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDE
GQLQIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQNRFDHAIN
NLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLALTLLG
>Mature_376_residues
AITVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSGIDVAVRNANDGISIMQTAEGA
MNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALNDELNRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIGL
KNMRTDDINMGGFSYVANGMASDSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDEG
QLQIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKYVDSHRSELGAMQNRFDHAINN
LENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTTILAQAKQAPNLALTLLG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=211, Percent_Identity=40.7582938388626, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40359; Mature: 40228

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSG
CEEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
IDVAVRNANDGISIMQTAEGAMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALN
CEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANG
HHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCCCCCHHHHHCC
MASDSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDE
CCCCCEEECCCCCCEEEEEHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCC
GQLQIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKY
CEEEEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VDSHRSELGAMQNRFDHAINNLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAQAKQAPNLALTLLG
HHHHHHCCCCEEEEECC
>Mature Secondary Structure 
AITVNTNASALVAQRNLSNANNMLNQSLERLASGSRINSAKDDAAGLQISNRLEAQMSG
EEEEECCCCEEHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
IDVAVRNANDGISIMQTAEGAMNETTNIMQRMRDLSLQATNGSNGQSERTAIQEEVTALN
CEEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHH
DELNRIAETTSFGGKKLLNGSFGSSSFQIGGSSGEAVQIGLKNMRTDDINMGGFSYVANG
HHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCEEEEEHHHCCCCCCCCCCHHHHHCC
MASDSWEVKSNQTDMTMAFTDRFGQPQEININAKAGDDIEELATYINGQTDLVSASVNDE
CCCCCEEECCCCCCEEEEEHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCC
GQLQIYMSGEDTAGTISFSGSLASELSMSAGYYESVDDINVTDVGGAQRAVSILDTAMKY
CEEEEEECCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
VDSHRSELGAMQNRFDHAINNLENVHENLGASNSRIKDTDYAKETTQMLKQQILQQVSTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ILAQAKQAPNLALTLLG
HHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10850984; 12620739 [H]