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The map label for this gene is ybbN [H]

Identifier: 218710247

GI number: 218710247

Start: 2449814

End: 2450668

Strand: Direct

Name: ybbN [H]

Synonym: VS_2280

Alternate gene names: 218710247

Gene position: 2449814-2450668 (Clockwise)

Preceding gene: 218710246

Following gene: 218710248

Centisome position: 74.25

GC content: 44.8

Gene sequence:

>855_bases
ATGCAATCTCCGCATATTGTTGAACTTAATGAGCAGAACTTTCGTCAAGTATTAGAAACCTCAATGCAGACGCCTGTACT
CATCCACTTTTGGGCACCAATGAGCCAAGAAAGTGCTCAGGTGATCCCTGAACTGCAAACATTAACTCAGCAATACAACG
GCGCTTTTACTTTAGCTCTGTTGAATTGTGAACAAGAGCAGGCAATTGCTAGCCAATTTGGCGTACAAGCACTCCCTACT
ATTGCACTGTTTGTTAACGGTCAGCCTGTTGATGGTTTGGGTGGCCTACAAAGCATACAAGCGATTGTTGAAATGTTAGG
AAAACACCTTCCTAGCCAAGACGAGCTCGTACTGCGTCAGGCTCTCGAGCAAATGCAAGCAGGCGAGCACGCACAAGCGC
TCGCAGCAATGCAACAATTGCCAATAGAGTTGACGAGCAAAGGCGAGGTAAAACTGGCAATCGCAGAATGTTTACTAGAA
ACGCAACAGTTTGATCTAGCTGAAACTCAGCTAGCCACCATTCCTCTAGAGTACCAAGATAATTACTATAAAGGCTTAGT
CGCAAAGCTTGAGCTTCACAAGCAAGCAGCAGACAGCCCTGAAATACAAGCATTAGAAACCGCTCTTCAGCAAGACCCAA
ATGACGCTAAGACAGCATCTGAATTAGCATTGCAATATCACCAAGTGAATCGCAACGAAGAAGCGATGGAACTGTTGTGG
TCTTTCCTTGCAAAAGATCTAAATGCTTGCAATGGTGATATGAAAAAAGAATTCATGGATATCTTAAGTGCGCTTGGACA
AGGTAACCCAGTTGCCAGTAAGTACCGCCGACAGCTGTACTCTCTGCTCTACTAA

Upstream 100 bases:

>100_bases
TGGCTCTTTTTATTTGAGATAACCAAGTTAGATCTTGAAGTTACCAGCATCTCCCCCCATATTTGCAACGTACCCACAAA
ACACACCTCAAGGAACGTAA

Downstream 100 bases:

>100_bases
CTAAACCCTAAAAGCACTAAAGATAAGCATCGTATATCTCATCGAAAATTGACAATTCAATCAATTAGTTTATCGAATAA
TAGAATGTAAAATGGGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQSPHIVELNEQNFRQVLETSMQTPVLIHFWAPMSQESAQVIPELQTLTQQYNGAFTLALLNCEQEQAIASQFGVQALPT
IALFVNGQPVDGLGGLQSIQAIVEMLGKHLPSQDELVLRQALEQMQAGEHAQALAAMQQLPIELTSKGEVKLAIAECLLE
TQQFDLAETQLATIPLEYQDNYYKGLVAKLELHKQAADSPEIQALETALQQDPNDAKTASELALQYHQVNRNEEAMELLW
SFLAKDLNACNGDMKKEFMDILSALGQGNPVASKYRRQLYSLLY

Sequences:

>Translated_284_residues
MQSPHIVELNEQNFRQVLETSMQTPVLIHFWAPMSQESAQVIPELQTLTQQYNGAFTLALLNCEQEQAIASQFGVQALPT
IALFVNGQPVDGLGGLQSIQAIVEMLGKHLPSQDELVLRQALEQMQAGEHAQALAAMQQLPIELTSKGEVKLAIAECLLE
TQQFDLAETQLATIPLEYQDNYYKGLVAKLELHKQAADSPEIQALETALQQDPNDAKTASELALQYHQVNRNEEAMELLW
SFLAKDLNACNGDMKKEFMDILSALGQGNPVASKYRRQLYSLLY
>Mature_284_residues
MQSPHIVELNEQNFRQVLETSMQTPVLIHFWAPMSQESAQVIPELQTLTQQYNGAFTLALLNCEQEQAIASQFGVQALPT
IALFVNGQPVDGLGGLQSIQAIVEMLGKHLPSQDELVLRQALEQMQAGEHAQALAAMQQLPIELTSKGEVKLAIAECLLE
TQQFDLAETQLATIPLEYQDNYYKGLVAKLELHKQAADSPEIQALETALQQDPNDAKTASELALQYHQVNRNEEAMELLW
SFLAKDLNACNGDMKKEFMDILSALGQGNPVASKYRRQLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI87081747, Length=284, Percent_Identity=51.056338028169, Blast_Score=273, Evalue=8e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31623; Mature: 31623

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPHIVELNEQNFRQVLETSMQTPVLIHFWAPMSQESAQVIPELQTLTQQYNGAFTLAL
CCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEE
LNCEQEQAIASQFGVQALPTIALFVNGQPVDGLGGLQSIQAIVEMLGKHLPSQDELVLRQ
ECCCHHHHHHHHHCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ALEQMQAGEHAQALAAMQQLPIELTSKGEVKLAIAECLLETQQFDLAETQLATIPLEYQD
HHHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHEECCHHCC
NYYKGLVAKLELHKQAADSPEIQALETALQQDPNDAKTASELALQYHQVNRNEEAMELLW
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SFLAKDLNACNGDMKKEFMDILSALGQGNPVASKYRRQLYSLLY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MQSPHIVELNEQNFRQVLETSMQTPVLIHFWAPMSQESAQVIPELQTLTQQYNGAFTLAL
CCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEE
LNCEQEQAIASQFGVQALPTIALFVNGQPVDGLGGLQSIQAIVEMLGKHLPSQDELVLRQ
ECCCHHHHHHHHHCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
ALEQMQAGEHAQALAAMQQLPIELTSKGEVKLAIAECLLETQQFDLAETQLATIPLEYQD
HHHHHHCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHEECCHHCC
NYYKGLVAKLELHKQAADSPEIQALETALQQDPNDAKTASELALQYHQVNRNEEAMELLW
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
SFLAKDLNACNGDMKKEFMDILSALGQGNPVASKYRRQLYSLLY
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]