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The map label for this gene is 218710239

Identifier: 218710239

GI number: 218710239

Start: 2444128

End: 2444439

Strand: Direct

Name: 218710239

Synonym: VS_2272

Alternate gene names: NA

Gene position: 2444128-2444439 (Clockwise)

Preceding gene: 218710238

Following gene: 218710245

Centisome position: 74.08

GC content: 45.51

Gene sequence:

>312_bases
ATGAATACAGAACCAAGCTCGGTAAGTGCATCAATCACCAAGGCAACCATCGCAATACACTATTGCCGTCAGTGTAATTG
GATGCTTCGTTCTAGTTGGTTATGCCAAGAGCTGCTGCATACCTTTAGCGAAGAAATTGAACAAGTGAGCTTGCATCCAG
ACACCGGAGGCAGGTTCGAAATCTTTTGTAATGGTGTGCAGATTTGGGAAAGAAAAGCAGATCAAGGTTTTCCAGAAGCG
AAAGTTCTGAAGCAAAGAGTGCGAAACATCATTGCTCCAGACAGGGACCTCGGCCACGTAGACTCAAAGTGA

Upstream 100 bases:

>100_bases
CTGTATATCATTAAACGATATACCAATAGAAAGGGGCATGATGCCCTTTTTTATTAACTGTTGACATCAAACTACTGTTT
TTGGATTTTTAGGGGTATCT

Downstream 100 bases:

>100_bases
GCCTTTTCTAACGCCGCCGATTGAGTTTATTTAAAGCTCACCACTCACAATTACGTCACCCTCAAGGCTAATAACTTTGA
ACGTTTTATTTTCATATACA

Product: hypothetical protein

Products: NA

Alternate protein names: SelT/SelW/SelH Selenoprotein; SelT/SelW/SelH; SelT/SelW/SelH Selenoprotein Domain; Selenoprotein W-Related Protein; Selenoprotein W-Related Family; SelT/SelW/SelH Domain-Containing Protein; SelT/SelW/SelH Selenodomain-Containing Protein; Selenoprotein W-Related; SelT/SelW/SelH Domain

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNTEPSSVSASITKATIAIHYCRQCNWMLRSSWLCQELLHTFSEEIEQVSLHPDTGGRFEIFCNGVQIWERKADQGFPEA
KVLKQRVRNIIAPDRDLGHVDSK

Sequences:

>Translated_103_residues
MNTEPSSVSASITKATIAIHYCRQCNWMLRSSWLCQELLHTFSEEIEQVSLHPDTGGRFEIFCNGVQIWERKADQGFPEA
KVLKQRVRNIIAPDRDLGHVDSK
>Mature_103_residues
MNTEPSSVSASITKATIAIHYCRQCNWMLRSSWLCQELLHTFSEEIEQVSLHPDTGGRFEIFCNGVQIWERKADQGFPEA
KVLKQRVRNIIAPDRDLGHVDSK

Specific function: Unknown

COG id: COG3526

COG function: function code O; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11802; Mature: 11802

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEPSSVSASITKATIAIHYCRQCNWMLRSSWLCQELLHTFSEEIEQVSLHPDTGGRFE
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
IFCNGVQIWERKADQGFPEAKVLKQRVRNIIAPDRDLGHVDSK
EEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNTEPSSVSASITKATIAIHYCRQCNWMLRSSWLCQELLHTFSEEIEQVSLHPDTGGRFE
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
IFCNGVQIWERKADQGFPEAKVLKQRVRNIIAPDRDLGHVDSK
EEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA