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The map label for this gene is yfcH [H]

Identifier: 218710245

GI number: 218710245

Start: 2447633

End: 2448547

Strand: Direct

Name: yfcH [H]

Synonym: VS_2278

Alternate gene names: 218710245

Gene position: 2447633-2448547 (Clockwise)

Preceding gene: 218710239

Following gene: 218710246

Centisome position: 74.19

GC content: 45.25

Gene sequence:

>915_bases
ATGAAGATATTGTTAACTGGTGGTACGGGATTTATTGGTTCTGAATTGGTCAAAAGTTGGAATACTGACGACGTGACATT
GTTGACACGGAGCCCCGAAAAAGCGAAGCAAAACCTAAATCACCTGAACCAGAATAACCTTCATTACATTCAATCTATTG
ATGAAATCAGCGATCTCAATGACTTCGATGTCGTGGTCAATCTTGCTGGCGAACCGATCGCTGACAAGCGTTGGAGTACG
GAGCAAAAAGAGAGGATCTGTAACAGCCGCTGGCACATTACTGAAAAACTGGTCGAGTTAATTCATGCCAGTAGCAACCC
ACCGCAGGCTTTCATTAGCGGCTCAGCCGTGGGTTACTATGGCGATCAACAGCAACACCCATTTGATGAATCACTACGAG
TAGAAGACGAAAGTTTTCCTCACAAAGTCTGCGCGCACTGGGAAGATATAGCCAAGAGAGCCCAATCCGATGAGACGCGT
GTGATACTACTAAGAACAGGGATTGTGTTAGGCGAAAATGGCGGCGCGTTGAAGAAGATGCTAATGCCCTACAAACTCGG
AGTAGGCGGACCACTTGGTTCAGGCGAACAGTACATGCCTTGGATTCACATGCTTGATATGGTGAGAGCCATCAACCACT
TATTGTCAATTCCTCACGCTCAAGGGGAATTTAATATGTGTGCCCCGCACCCTGTCACCAACAAACTGTTCAGCAGTACA
CTCGCCAAGCAACTACGCCGACCTCATTTCTTATTCACTCCGAAATGGGCAATGTCGCTTCTGATGGGTGAATCTTCTTG
TCTGCTCTTTGACAGCATTCGTTCCAAACCAAAGAAACTCACTGAAATGGGATTTATCTTTAGTTACTCAAGAATAGAAC
CAGCCTTAAAAAACTTGTTACAACATCAAGATTAA

Upstream 100 bases:

>100_bases
CACACAATTGAAACCAACTGATCGTTATAGTGATTTTTTCGTATTGATTGGCGTTCAAAAACAAGCCATGTCTATAATTA
TGTTTAATAGGGAGATTGGT

Downstream 100 bases:

>100_bases
TTCTTTACCCTAGAGCGATAAAGACTCTAATGAAGGATTAAGCGTGAACAAGTCGATTCTGATCACCGGTTGCTCAACGG
GTATTGGCTATACATGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKILLTGGTGFIGSELVKSWNTDDVTLLTRSPEKAKQNLNHLNQNNLHYIQSIDEISDLNDFDVVVNLAGEPIADKRWST
EQKERICNSRWHITEKLVELIHASSNPPQAFISGSAVGYYGDQQQHPFDESLRVEDESFPHKVCAHWEDIAKRAQSDETR
VILLRTGIVLGENGGALKKMLMPYKLGVGGPLGSGEQYMPWIHMLDMVRAINHLLSIPHAQGEFNMCAPHPVTNKLFSST
LAKQLRRPHFLFTPKWAMSLLMGESSCLLFDSIRSKPKKLTEMGFIFSYSRIEPALKNLLQHQD

Sequences:

>Translated_304_residues
MKILLTGGTGFIGSELVKSWNTDDVTLLTRSPEKAKQNLNHLNQNNLHYIQSIDEISDLNDFDVVVNLAGEPIADKRWST
EQKERICNSRWHITEKLVELIHASSNPPQAFISGSAVGYYGDQQQHPFDESLRVEDESFPHKVCAHWEDIAKRAQSDETR
VILLRTGIVLGENGGALKKMLMPYKLGVGGPLGSGEQYMPWIHMLDMVRAINHLLSIPHAQGEFNMCAPHPVTNKLFSST
LAKQLRRPHFLFTPKWAMSLLMGESSCLLFDSIRSKPKKLTEMGFIFSYSRIEPALKNLLQHQD
>Mature_304_residues
MKILLTGGTGFIGSELVKSWNTDDVTLLTRSPEKAKQNLNHLNQNNLHYIQSIDEISDLNDFDVVVNLAGEPIADKRWST
EQKERICNSRWHITEKLVELIHASSNPPQAFISGSAVGYYGDQQQHPFDESLRVEDESFPHKVCAHWEDIAKRAQSDETR
VILLRTGIVLGENGGALKKMLMPYKLGVGGPLGSGEQYMPWIHMLDMVRAINHLLSIPHAQGEFNMCAPHPVTNKLFSST
LAKQLRRPHFLFTPKWAMSLLMGESSCLLFDSIRSKPKKLTEMGFIFSYSRIEPALKNLLQHQD

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=305, Percent_Identity=32.7868852459016, Blast_Score=177, Evalue=8e-45,
Organism=Escherichia coli, GI1788642, Length=307, Percent_Identity=49.8371335504886, Blast_Score=289, Evalue=2e-79,
Organism=Drosophila melanogaster, GI28573846, Length=303, Percent_Identity=30.03300330033, Blast_Score=155, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34361; Mature: 34361

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILLTGGTGFIGSELVKSWNTDDVTLLTRSPEKAKQNLNHLNQNNLHYIQSIDEISDLN
CEEEEECCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DFDVVVNLAGEPIADKRWSTEQKERICNSRWHITEKLVELIHASSNPPQAFISGSAVGYY
CCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCEEEEC
GDQQQHPFDESLRVEDESFPHKVCAHWEDIAKRAQSDETRVILLRTGIVLGENGGALKKM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCCCHHHHH
LMPYKLGVGGPLGSGEQYMPWIHMLDMVRAINHLLSIPHAQGEFNMCAPHPVTNKLFSST
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LAKQLRRPHFLFTPKWAMSLLMGESSCLLFDSIRSKPKKLTEMGFIFSYSRIEPALKNLL
HHHHHCCCCEEECHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QHQD
CCCC
>Mature Secondary Structure
MKILLTGGTGFIGSELVKSWNTDDVTLLTRSPEKAKQNLNHLNQNNLHYIQSIDEISDLN
CEEEEECCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
DFDVVVNLAGEPIADKRWSTEQKERICNSRWHITEKLVELIHASSNPPQAFISGSAVGYY
CCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEECCCEEEEC
GDQQQHPFDESLRVEDESFPHKVCAHWEDIAKRAQSDETRVILLRTGIVLGENGGALKKM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECEEEECCCCHHHHH
LMPYKLGVGGPLGSGEQYMPWIHMLDMVRAINHLLSIPHAQGEFNMCAPHPVTNKLFSST
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
LAKQLRRPHFLFTPKWAMSLLMGESSCLLFDSIRSKPKKLTEMGFIFSYSRIEPALKNLL
HHHHHCCCCEEECHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QHQD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]