| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is znuA [H]
Identifier: 218710205
GI number: 218710205
Start: 2404000
End: 2404884
Strand: Reverse
Name: znuA [H]
Synonym: VS_2237
Alternate gene names: 218710205
Gene position: 2404884-2404000 (Counterclockwise)
Preceding gene: 218710208
Following gene: 218710204
Centisome position: 72.89
GC content: 42.71
Gene sequence:
>885_bases ATGTCACGTTCATCTTTTATACTTGCTACTTTGCTTTTAGCGCCAAGTGTTGCAAGTGCCAATACTATTCTAACAAGCTT CAAACCAATTCAAATGATTGTGACAGAATTAACGCAGGGCGTTAGTGAACCTGATGTGTTGATGAACAGCAATGCTTCGC CGCACGATTATGCGCTTAAGCCATCGGATGTCAAAAAAGTTCATAGTGCCGATATGGTGATCTGGTTTGGCCCTGACCTA GAAGCTTTTTTGACCAAGGTGATTGGTTCTAAAGAAAACGTTATCAAGATCAGTGAGATTCCGGGGATTAACTTGAGAGA GTTTGGACATGAAGACCACGATGCTCATGAAGGGCACAACCATGGTAGTCATGACCCGCATTTTTGGTTGGGTATCGATC AAGTCGAGGTCGCGGCAAAATATATCTCAGCTAAGCTAATTGAGTCAGACTCTGATAACGCCATGGCGTATCAAGAGAAT CTAGATTCATTCTTGATTGCTTTGAAAGAGAAACAGCAGGCGATTCATGAACAACTCGCGCCAGTGAAAGACAAAGGCTA CTACGTATTCCATGACGCGTATGGCTACTTCGAACAAGAATTTAAGTTGAATAATCTAGGTCACTTTACGGTTAGCCCTG AGCGTAAACCTGGCGCAAAAAGTCTGATAGCTATCAAGAAGACTTTGGTGCGTGAAAATGTTCAATGCGTATTTTCAGAG CCTCAATTTACACCAGCGGTGATTGAATCGGTGACTCGTGGAAGTAACGCTAAACAAGGACAACTTGATCCTGTCGGTTC GCAGGTTGAAGTGAAGAGTGGAAGCTATTTTGATTTTCTTCAGCAGCTTACAGATAGTTACACAAGTTGCTTGAGTGGAA TGTAA
Upstream 100 bases:
>100_bases TGGATTAAATTATCCATGAATAGAACTCATTTGCAATTCGCTAATGTTATAATGTAACATTTACCTCAAGCCTAAGCTAC TTTTCTATTAACGAGGAATT
Downstream 100 bases:
>100_bases TCAATATCGAGTATTCTTTACGACACTTTGTTCTCGTTAATTGATGAATCATGCCGCTTTTTGCGGCATTTTCGTGACCG CTAAGATAAAACCTTCCAAC
Product: high-affinity zinc uptake system protein ZnuA
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSRSSFILATLLLAPSVASANTILTSFKPIQMIVTELTQGVSEPDVLMNSNASPHDYALKPSDVKKVHSADMVIWFGPDL EAFLTKVIGSKENVIKISEIPGINLREFGHEDHDAHEGHNHGSHDPHFWLGIDQVEVAAKYISAKLIESDSDNAMAYQEN LDSFLIALKEKQQAIHEQLAPVKDKGYYVFHDAYGYFEQEFKLNNLGHFTVSPERKPGAKSLIAIKKTLVRENVQCVFSE PQFTPAVIESVTRGSNAKQGQLDPVGSQVEVKSGSYFDFLQQLTDSYTSCLSGM
Sequences:
>Translated_294_residues MSRSSFILATLLLAPSVASANTILTSFKPIQMIVTELTQGVSEPDVLMNSNASPHDYALKPSDVKKVHSADMVIWFGPDL EAFLTKVIGSKENVIKISEIPGINLREFGHEDHDAHEGHNHGSHDPHFWLGIDQVEVAAKYISAKLIESDSDNAMAYQEN LDSFLIALKEKQQAIHEQLAPVKDKGYYVFHDAYGYFEQEFKLNNLGHFTVSPERKPGAKSLIAIKKTLVRENVQCVFSE PQFTPAVIESVTRGSNAKQGQLDPVGSQVEVKSGSYFDFLQQLTDSYTSCLSGM >Mature_293_residues SRSSFILATLLLAPSVASANTILTSFKPIQMIVTELTQGVSEPDVLMNSNASPHDYALKPSDVKKVHSADMVIWFGPDLE AFLTKVIGSKENVIKISEIPGINLREFGHEDHDAHEGHNHGSHDPHFWLGIDQVEVAAKYISAKLIESDSDNAMAYQENL DSFLIALKEKQQAIHEQLAPVKDKGYYVFHDAYGYFEQEFKLNNLGHFTVSPERKPGAKSLIAIKKTLVRENVQCVFSEP QFTPAVIESVTRGSNAKQGQLDPVGSQVEVKSGSYFDFLQQLTDSYTSCLSGM
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG4531
COG function: function code P; ABC-type Zn2+ transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=289, Percent_Identity=41.1764705882353, Blast_Score=238, Evalue=3e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 32559; Mature: 32428
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSSFILATLLLAPSVASANTILTSFKPIQMIVTELTQGVSEPDVLMNSNASPHDYALK CCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCC PSDVKKVHSADMVIWFGPDLEAFLTKVIGSKENVIKISEIPGINLREFGHEDHDAHEGHN CHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCC HGSHDPHFWLGIDQVEVAAKYISAKLIESDSDNAMAYQENLDSFLIALKEKQQAIHEQLA CCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVKDKGYYVFHDAYGYFEQEFKLNNLGHFTVSPERKPGAKSLIAIKKTLVRENVQCVFSE CCCCCCEEEEECCCCHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC PQFTPAVIESVTRGSNAKQGQLDPVGSQVEVKSGSYFDFLQQLTDSYTSCLSGM CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRSSFILATLLLAPSVASANTILTSFKPIQMIVTELTQGVSEPDVLMNSNASPHDYALK CCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCC PSDVKKVHSADMVIWFGPDLEAFLTKVIGSKENVIKISEIPGINLREFGHEDHDAHEGHN CHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCC HGSHDPHFWLGIDQVEVAAKYISAKLIESDSDNAMAYQENLDSFLIALKEKQQAIHEQLA CCCCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PVKDKGYYVFHDAYGYFEQEFKLNNLGHFTVSPERKPGAKSLIAIKKTLVRENVQCVFSE CCCCCCEEEEECCCCHHHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC PQFTPAVIESVTRGSNAKQGQLDPVGSQVEVKSGSYFDFLQQLTDSYTSCLSGM CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 9600841; 9680209 [H]