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The map label for this gene is yiaM [C]

Identifier: 218710179

GI number: 218710179

Start: 2362396

End: 2363151

Strand: Reverse

Name: yiaM [C]

Synonym: VS_2211

Alternate gene names: 218710179

Gene position: 2363151-2362396 (Counterclockwise)

Preceding gene: 218710180

Following gene: 218710178

Centisome position: 71.63

GC content: 45.63

Gene sequence:

>756_bases
ATGGATAATCCTCAAATGGAACAGCCAAATTCTAGCGAATCAGCACTGGAAACCTCTTTTTTTTCCAAAGTCGGAAGAGT
TACCGATGTGATTGAAGAGTCATTAATCGCATTTTTCCTTGGCGCAATGACGCTACTTACTTTTGCCAATGTGATATTTC
GATACGCATTCAATGGCAATATCTTATGGGCACTAGAACTGACGGTGTTCATGTTCGCTTGGATGGTGTTAGTGGGCGCA
TCTTATGGCGTTAAAAAACACTTCCACATTGGTGTTGATGTGATCATCAACCTTGCCCCAGAAAAGCTACGCAAAGTGTA
TGCGTTAATCGCCGTCACAAGCTGCCTAGCATTCTCAATCTTACTTCTTATAGGTTCTTGGAATTACTGGTACCCGTTCG
CGACTGAGCGCGCTTGGTACGAGACCGATGATATTCCAATGCCAGAGATGCTTCAGTTCCTTGCCGACTGGATGAATGAA
GGCGAGCGATACGAGAAACTGCCACGTTTTATTCCTTACATGGCACTGCCTATTGGTATGGCAATGCTGACGTTCCGTTT
TGCCCAAGTTGCTTACCAAGTAGTCACAGGCAAGCTTGATCGCATGATAGCGGGGCATGAAGCCGAAGAAGAGCTGGATG
CATTGAAAGCTGATGTGTTAGCGGGTTCTGATGAAGACGCGACAGCGGTATTGGATTCGACTAAGCAAAACAAGGCGAAC
GAGTCGGGTACAAAATCTAACGGTAAGGAAGACTAA

Upstream 100 bases:

>100_bases
ATCTTATCGATGCAGCGTTAGCTTCAAACCAATAACACCGCTAAGGGAGTGGCGTGCATTTCGCCACTCCTTATTAAAAT
AACTATAAGCGGAGTCAATT

Downstream 100 bases:

>100_bases
TCATGGCAATGTTATTTCTATTTTTAATGGTAATTGCTTTCATGTTGGTCGGTGTACCAATTGCGATTTCCCTTGGTTTA
TCGAGCGTTATATTCTTGTT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transporter; C4-Dicarboxylate Transport System Permease Small Subunit; C4-Dicarboxylate Transport Protein DctQ; ABC Transporter; Dicarboxylate Transporter; TRAP-Type C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; C4-Dicarboxylate Transport System Small Permease Component; C4-Dicarboxylate Transporter Small Permease Component; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP-Type C4-Dicarboxylate Transporter Small Permease; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDNPQMEQPNSSESALETSFFSKVGRVTDVIEESLIAFFLGAMTLLTFANVIFRYAFNGNILWALELTVFMFAWMVLVGA
SYGVKKHFHIGVDVIINLAPEKLRKVYALIAVTSCLAFSILLLIGSWNYWYPFATERAWYETDDIPMPEMLQFLADWMNE
GERYEKLPRFIPYMALPIGMAMLTFRFAQVAYQVVTGKLDRMIAGHEAEEELDALKADVLAGSDEDATAVLDSTKQNKAN
ESGTKSNGKED

Sequences:

>Translated_251_residues
MDNPQMEQPNSSESALETSFFSKVGRVTDVIEESLIAFFLGAMTLLTFANVIFRYAFNGNILWALELTVFMFAWMVLVGA
SYGVKKHFHIGVDVIINLAPEKLRKVYALIAVTSCLAFSILLLIGSWNYWYPFATERAWYETDDIPMPEMLQFLADWMNE
GERYEKLPRFIPYMALPIGMAMLTFRFAQVAYQVVTGKLDRMIAGHEAEEELDALKADVLAGSDEDATAVLDSTKQNKAN
ESGTKSNGKED
>Mature_251_residues
MDNPQMEQPNSSESALETSFFSKVGRVTDVIEESLIAFFLGAMTLLTFANVIFRYAFNGNILWALELTVFMFAWMVLVGA
SYGVKKHFHIGVDVIINLAPEKLRKVYALIAVTSCLAFSILLLIGSWNYWYPFATERAWYETDDIPMPEMLQFLADWMNE
GERYEKLPRFIPYMALPIGMAMLTFRFAQVAYQVVTGKLDRMIAGHEAEEELDALKADVLAGSDEDATAVLDSTKQNKAN
ESGTKSNGKED

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28275; Mature: 28275

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNPQMEQPNSSESALETSFFSKVGRVTDVIEESLIAFFLGAMTLLTFANVIFRYAFNGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ILWALELTVFMFAWMVLVGASYGVKKHFHIGVDVIINLAPEKLRKVYALIAVTSCLAFSI
EEHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
LLLIGSWNYWYPFATERAWYETDDIPMPEMLQFLADWMNEGERYEKLPRFIPYMALPIGM
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AMLTFRFAQVAYQVVTGKLDRMIAGHEAEEELDALKADVLAGSDEDATAVLDSTKQNKAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ESGTKSNGKED
CCCCCCCCCCC
>Mature Secondary Structure
MDNPQMEQPNSSESALETSFFSKVGRVTDVIEESLIAFFLGAMTLLTFANVIFRYAFNGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ILWALELTVFMFAWMVLVGASYGVKKHFHIGVDVIINLAPEKLRKVYALIAVTSCLAFSI
EEHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
LLLIGSWNYWYPFATERAWYETDDIPMPEMLQFLADWMNEGERYEKLPRFIPYMALPIGM
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
AMLTFRFAQVAYQVVTGKLDRMIAGHEAEEELDALKADVLAGSDEDATAVLDSTKQNKAN
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
ESGTKSNGKED
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA