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The map label for this gene is dctP [H]

Identifier: 218710180

GI number: 218710180

Start: 2363217

End: 2364212

Strand: Reverse

Name: dctP [H]

Synonym: VS_2212

Alternate gene names: 218710180

Gene position: 2364212-2363217 (Counterclockwise)

Preceding gene: 218710182

Following gene: 218710179

Centisome position: 71.66

GC content: 43.98

Gene sequence:

>996_bases
ATGTTTAAGCCTCTTACCCTGCTGTCTGTCTCTGCTCTGGCGCTCACAAGTTTTAATGCTGCTGCAAACTGTGACCCAGG
TGAAATCGTGATTAAATTCAGTCATGTAACCAATACCGATAAGCACCCGAAAGGCATTGCCGCTTCTTTACTGGAAGAGC
GAGTAAACACGGAAATGAATGGCAAAGCTTGTATGCAAGTTTTCCCTAATTCAACACTCTACGATGATAATAAAGTACTG
GAAGCCCTGTTAAATGGTGATGTTCAAATGGCGGCTCCTTCGCTGTCTAAATTTGAGAAGTTCACTAAGAAATACCGCAT
TTTTGACCTTCCTTTCCTATTTGAAGACGTAGAAGCTGTTGACCGTTTCCAAAACTCAGAGTCTGGCGAAAAGCTGAAGA
ACGCGATGAAGCGTCGTGGCCTTCAAGGCCTAGCGTTTTGGCACAATGGCATGAAACAGATGTCAGCAAACAAACCTCTT
ATCAATCCTGAAGACGCGGAAGGTTTGAAATTCCGTGTTCAAGCATCAGACGTATTGGTTGCTCAGTTTGAACAGCTAGG
TGCTAACCCACAGAAGATGTCTTTCAAAGAAGTATACGGTGGCCTACAAACTAAGGTTATCGATGGCCAAGAGAACACAT
GGTCAAACATCTACGGTAAGAAGTTCTTTGAAGTACAAGACGGCGTGACAGAAACTAACCACGGTATTCTTGATTACCTG
GTAGTAACGTCGAACGACTTCTGGAAAGACCTACCTGAAGATGTACGTACGCAACTTGGCACAATCGTTCAAGAAGTGTC
TGAGACTCGTAACGCAGAATCTTCAAAAGTTAACCTAGCGAACAAAAACAACATCATCGAAGCTGGTGGTGAGGTTCGTA
CGCTTACGCCTGAACAGCGTGAAGCATGGGTAACTGCGCTTCAACCAGTATGGAAGAAGTTTGAAAAAGACATCGGTTCA
GATCTTATCGATGCAGCGTTAGCTTCAAACCAATAA

Upstream 100 bases:

>100_bases
AAGGTTGTTAATGATTTGTGTCAATGTGGCGCGCTAATTGCCTTAGTGAAAGCACGCAGTTCCCATTGAAGGGCTGCTTT
GTTTACTAAGGAGAATAATA

Downstream 100 bases:

>100_bases
CACCGCTAAGGGAGTGGCGTGCATTTCGCCACTCCTTATTAAAATAACTATAAGCGGAGTCAATTATGGATAATCCTCAA
ATGGAACAGCCAAATTCTAG

Product: family 7 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFKPLTLLSVSALALTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEERVNTEMNGKACMQVFPNSTLYDDNKVL
EALLNGDVQMAAPSLSKFEKFTKKYRIFDLPFLFEDVEAVDRFQNSESGEKLKNAMKRRGLQGLAFWHNGMKQMSANKPL
INPEDAEGLKFRVQASDVLVAQFEQLGANPQKMSFKEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGVTETNHGILDYL
VVTSNDFWKDLPEDVRTQLGTIVQEVSETRNAESSKVNLANKNNIIEAGGEVRTLTPEQREAWVTALQPVWKKFEKDIGS
DLIDAALASNQ

Sequences:

>Translated_331_residues
MFKPLTLLSVSALALTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEERVNTEMNGKACMQVFPNSTLYDDNKVL
EALLNGDVQMAAPSLSKFEKFTKKYRIFDLPFLFEDVEAVDRFQNSESGEKLKNAMKRRGLQGLAFWHNGMKQMSANKPL
INPEDAEGLKFRVQASDVLVAQFEQLGANPQKMSFKEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGVTETNHGILDYL
VVTSNDFWKDLPEDVRTQLGTIVQEVSETRNAESSKVNLANKNNIIEAGGEVRTLTPEQREAWVTALQPVWKKFEKDIGS
DLIDAALASNQ
>Mature_331_residues
MFKPLTLLSVSALALTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEERVNTEMNGKACMQVFPNSTLYDDNKVL
EALLNGDVQMAAPSLSKFEKFTKKYRIFDLPFLFEDVEAVDRFQNSESGEKLKNAMKRRGLQGLAFWHNGMKQMSANKPL
INPEDAEGLKFRVQASDVLVAQFEQLGANPQKMSFKEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGVTETNHGILDYL
VVTSNDFWKDLPEDVRTQLGTIVQEVSETRNAESSKVNLANKNNIIEAGGEVRTLTPEQREAWVTALQPVWKKFEKDIGS
DLIDAALASNQ

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=280, Percent_Identity=31.4285714285714, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36946; Mature: 36946

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPLTLLSVSALALTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEERVNTEMN
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVFPNSTLYDDNKVLEALLNGDVQMAAPSLSKFEKFTKKYRIFDLPFLFEDVEAV
CHHHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHEEECCHHHHHHHHHH
DRFQNSESGEKLKNAMKRRGLQGLAFWHNGMKQMSANKPLINPEDAEGLKFRVQASDVLV
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH
AQFEQLGANPQKMSFKEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGVTETNHGILDYL
HHHHHHCCCCCCCCHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE
VVTSNDFWKDLPEDVRTQLGTIVQEVSETRNAESSKVNLANKNNIIEAGGEVRTLTPEQR
EECCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEECCCHHH
EAWVTALQPVWKKFEKDIGSDLIDAALASNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKPLTLLSVSALALTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEERVNTEMN
CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
GKACMQVFPNSTLYDDNKVLEALLNGDVQMAAPSLSKFEKFTKKYRIFDLPFLFEDVEAV
CHHHHHCCCCCCCCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHEEECCHHHHHHHHHH
DRFQNSESGEKLKNAMKRRGLQGLAFWHNGMKQMSANKPLINPEDAEGLKFRVQASDVLV
HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHH
AQFEQLGANPQKMSFKEVYGGLQTKVIDGQENTWSNIYGKKFFEVQDGVTETNHGILDYL
HHHHHHCCCCCCCCHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEE
VVTSNDFWKDLPEDVRTQLGTIVQEVSETRNAESSKVNLANKNNIIEAGGEVRTLTPEQR
EECCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCEEECCCHHH
EAWVTALQPVWKKFEKDIGSDLIDAALASNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]