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The map label for this gene is yibD [C]

Identifier: 218710130

GI number: 218710130

Start: 2306923

End: 2307849

Strand: Reverse

Name: yibD [C]

Synonym: VS_2151

Alternate gene names: 218710130

Gene position: 2307849-2306923 (Counterclockwise)

Preceding gene: 218710132

Following gene: 218710129

Centisome position: 69.95

GC content: 41.75

Gene sequence:

>927_bases
ATGGCTAAAGTAAGTGTTGTTATTCCTACCTATAATTGTTTGGATTACCTGCCGAAGGCAATTGGCAGCGTACTGCAGCA
GACACATCAAGACGTGGAGTTGATCATTATTGACGATAACAGCAACGATGGAACGTCGACGTATCTCGCTTCGATAGAAG
ATGAACGCATTATTACCTTATCTACTTTGGGTGTGGGTGCGCCTCAAGCGAGAAACCTAGGGATTGAAAAGGCGACCGGT
GAATACATCGCTTTTCTAGACGCAGACGACTTCTGGTTTCCAGAAAAAATCGAGCGCCAACTCGAATTTCATCAACGATA
CCCAGATCTCGCGATGAGCTTTACTAACTACGAGCACCTTACTGAAGATTACCAAGTGATAGTCGATTGCTTTAGTTATT
GGTCGCAGTTTCAAGACCAAGATGAAGCGTTTATCAATATAGAAAACCCATTAGAGTTCATCATTGAAAACAATGTCATT
GGAACATCAACGGTGATGGTGAAAGCGGATGTGTTTTCTCAAACAGACAGCTTTAATCCTGATATAAAATATGCAGAAGA
TTGGGAACTGTGGCTTCGAATGAGTGAAAATCATCAGATTGGTGTGTTGAACTCCGTGCAGGTTGGTTACTTGATGAGAG
CGAGCTCTGTTACCCAAACTGAAAGTCTTAAATTGAGAAATTTGCAATCTATAGAAACCATTCTTCAACATTACCAAAAT
GACAGTCAACGATGGAATCTACCCACTTCTAGCTTCAAAATCGCAAAGGCGAGAATACTGGAAGGCTACGCTGACTATTA
CAGAGGCTTACAACAAAACCGATTGGCCATTTCATACAGTATTCGCTCGTTAGTTTTGGCTCCGCAAAAACGAACGTTAC
GACATCTTCTTGGAGACTGTAAGAGTTTCCTAATGCCTGCATTGTAA

Upstream 100 bases:

>100_bases
ACACGTAGGAGACTGATCTAAAAGTGATTTCATAGCAAGCCACTCTCGGCATAGAAGATGCAACATCAGCCATATAACGT
ATAATTTTGAGGGCGTCATT

Downstream 100 bases:

>100_bases
GGAATAGGTGTCTGCTATGGGGTCACTAAAACAGTCTGCCTATTACGCCATTGGCATTGTGATGATGAAAGGGATCTCGC
TGGTGATGATCCCCTATATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAKVSVVIPTYNCLDYLPKAIGSVLQQTHQDVELIIIDDNSNDGTSTYLASIEDERIITLSTLGVGAPQARNLGIEKATG
EYIAFLDADDFWFPEKIERQLEFHQRYPDLAMSFTNYEHLTEDYQVIVDCFSYWSQFQDQDEAFINIENPLEFIIENNVI
GTSTVMVKADVFSQTDSFNPDIKYAEDWELWLRMSENHQIGVLNSVQVGYLMRASSVTQTESLKLRNLQSIETILQHYQN
DSQRWNLPTSSFKIAKARILEGYADYYRGLQQNRLAISYSIRSLVLAPQKRTLRHLLGDCKSFLMPAL

Sequences:

>Translated_308_residues
MAKVSVVIPTYNCLDYLPKAIGSVLQQTHQDVELIIIDDNSNDGTSTYLASIEDERIITLSTLGVGAPQARNLGIEKATG
EYIAFLDADDFWFPEKIERQLEFHQRYPDLAMSFTNYEHLTEDYQVIVDCFSYWSQFQDQDEAFINIENPLEFIIENNVI
GTSTVMVKADVFSQTDSFNPDIKYAEDWELWLRMSENHQIGVLNSVQVGYLMRASSVTQTESLKLRNLQSIETILQHYQN
DSQRWNLPTSSFKIAKARILEGYADYYRGLQQNRLAISYSIRSLVLAPQKRTLRHLLGDCKSFLMPAL
>Mature_307_residues
AKVSVVIPTYNCLDYLPKAIGSVLQQTHQDVELIIIDDNSNDGTSTYLASIEDERIITLSTLGVGAPQARNLGIEKATGE
YIAFLDADDFWFPEKIERQLEFHQRYPDLAMSFTNYEHLTEDYQVIVDCFSYWSQFQDQDEAFINIENPLEFIIENNVIG
TSTVMVKADVFSQTDSFNPDIKYAEDWELWLRMSENHQIGVLNSVQVGYLMRASSVTQTESLKLRNLQSIETILQHYQND
SQRWNLPTSSFKIAKARILEGYADYYRGLQQNRLAISYSIRSLVLAPQKRTLRHLLGDCKSFLMPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=99, Percent_Identity=42.4242424242424, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788372, Length=203, Percent_Identity=28.0788177339901, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35379; Mature: 35248

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVSVVIPTYNCLDYLPKAIGSVLQQTHQDVELIIIDDNSNDGTSTYLASIEDERIITL
CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEE
STLGVGAPQARNLGIEKATGEYIAFLDADDFWFPEKIERQLEFHQRYPDLAMSFTNYEHL
EECCCCCCCHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHH
TEDYQVIVDCFSYWSQFQDQDEAFINIENPLEFIIENNVIGTSTVMVKADVFSQTDSFNP
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEHHHCCCCCCCC
DIKYAEDWELWLRMSENHQIGVLNSVQVGYLMRASSVTQTESLKLRNLQSIETILQHYQN
CCCCCCCEEEEEEECCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
DSQRWNLPTSSFKIAKARILEGYADYYRGLQQNRLAISYSIRSLVLAPQKRTLRHLLGDC
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHHCCCCHHHHHHHHHHH
KSFLMPAL
HHHHCCCC
>Mature Secondary Structure 
AKVSVVIPTYNCLDYLPKAIGSVLQQTHQDVELIIIDDNSNDGTSTYLASIEDERIITL
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEE
STLGVGAPQARNLGIEKATGEYIAFLDADDFWFPEKIERQLEFHQRYPDLAMSFTNYEHL
EECCCCCCCHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHH
TEDYQVIVDCFSYWSQFQDQDEAFINIENPLEFIIENNVIGTSTVMVKADVFSQTDSFNP
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCEEEEEEEHHHCCCCCCCC
DIKYAEDWELWLRMSENHQIGVLNSVQVGYLMRASSVTQTESLKLRNLQSIETILQHYQN
CCCCCCCEEEEEEECCCCCEEEECCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
DSQRWNLPTSSFKIAKARILEGYADYYRGLQQNRLAISYSIRSLVLAPQKRTLRHLLGDC
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHHCCCCHHHHHHHHHHH
KSFLMPAL
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]