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The map label for this gene is yeeY [H]

Identifier: 218710085

GI number: 218710085

Start: 2262055

End: 2262966

Strand: Reverse

Name: yeeY [H]

Synonym: VS_2106

Alternate gene names: 218710085

Gene position: 2262966-2262055 (Counterclockwise)

Preceding gene: 218710088

Following gene: 218710083

Centisome position: 68.59

GC content: 47.81

Gene sequence:

>912_bases
ATGAGATTGAAAACCACCCTCGACCAATGGCAAACCCTTTACGAGATTGACCGCGCAGGCAGTATTCAGGCAGCGGCACT
GCAATTGAACAAGAGCCATACCACGCTGATTTATGCGCTGAGAAAATTGGAGGACCAATTAGGCGTGACTTTAGTGCAGG
TTGAAGGGCGTCGGGCGGTATTGTCGGAGGATGGGAAATCACTGTTGCGGCGTGCAAGCAGTATGTTGGAACAAGCTCGC
GAGCTAGAGTTGATCAGTGAACAACTGGCGAAAGGTGTAGAGTCTGAAATTGTGGTTGCGGTTGATCACTTGTGTTGTCT
TGAGCGTCTTTATCAACCGATGGCTGCATTTTTGGCGGAGAACAACACCACATCAATACAAGTGATTGAAACATCATTGT
CTAAAACAACCGAACTGGTGACTCAAGAACTGGCTGATGTGGCTATCATCAACTTGCCTATTACTAATTACTCAGCCGAA
GCCTTTGGTTTTACGATGATGGAGCCAGTAGTTGCTAGCTCACATCCGTTAGCAAGTGCCGTTTCAGTGTCGTTGAATCA
ACTGTCGTCTTTGCCGCAAATTGTGGTGCGAGATTTAGGTGCTCAAACTAGTCAAGGCAGCAAAAAGCAAGGGAACAAAC
AGGATGTGGGCTGGTTGAAGTCGAGTCAGCGTATTACGGTGGACAATTTCGACCATGCGTTTGGCGCGGTAGAGCAGGGA
GTCGGGTATTGTCGACTACCAAAGCACATTGTTGAAAGCCGAGGAAGTGACAAGCTCACTGTGTTGAATGTCGAAAATGG
CAGTGGGTATCACGTTCCGCTGCACCTGACTTTACCAAAAGGAGCCAAGACAGGCCCAGCTGCTAAACGTTTCTATGAGT
TACTTCTTGAGTCAGCTTCTAATGTGAGCTAA

Upstream 100 bases:

>100_bases
AAACATAGGAGGCTTGATTGCCTGTTGAAATAGATATTACCTGTAAAAAACAGACAGAAAAGTTCATAATATAGTTATTA
ACTGTCAGGATTTTAGACCA

Downstream 100 bases:

>100_bases
CGGCGACATGAACCTTGAACGATTAACTAGGGGCCTTGAACGATTAACGAGGCTGATTGCCGTTTAAGAACAGCGCGACA
CATTCGCGAGTGTAGTGAAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRLKTTLDQWQTLYEIDRAGSIQAAALQLNKSHTTLIYALRKLEDQLGVTLVQVEGRRAVLSEDGKSLLRRASSMLEQAR
ELELISEQLAKGVESEIVVAVDHLCCLERLYQPMAAFLAENNTTSIQVIETSLSKTTELVTQELADVAIINLPITNYSAE
AFGFTMMEPVVASSHPLASAVSVSLNQLSSLPQIVVRDLGAQTSQGSKKQGNKQDVGWLKSSQRITVDNFDHAFGAVEQG
VGYCRLPKHIVESRGSDKLTVLNVENGSGYHVPLHLTLPKGAKTGPAAKRFYELLLESASNVS

Sequences:

>Translated_303_residues
MRLKTTLDQWQTLYEIDRAGSIQAAALQLNKSHTTLIYALRKLEDQLGVTLVQVEGRRAVLSEDGKSLLRRASSMLEQAR
ELELISEQLAKGVESEIVVAVDHLCCLERLYQPMAAFLAENNTTSIQVIETSLSKTTELVTQELADVAIINLPITNYSAE
AFGFTMMEPVVASSHPLASAVSVSLNQLSSLPQIVVRDLGAQTSQGSKKQGNKQDVGWLKSSQRITVDNFDHAFGAVEQG
VGYCRLPKHIVESRGSDKLTVLNVENGSGYHVPLHLTLPKGAKTGPAAKRFYELLLESASNVS
>Mature_303_residues
MRLKTTLDQWQTLYEIDRAGSIQAAALQLNKSHTTLIYALRKLEDQLGVTLVQVEGRRAVLSEDGKSLLRRASSMLEQAR
ELELISEQLAKGVESEIVVAVDHLCCLERLYQPMAAFLAENNTTSIQVIETSLSKTTELVTQELADVAIINLPITNYSAE
AFGFTMMEPVVASSHPLASAVSVSLNQLSSLPQIVVRDLGAQTSQGSKKQGNKQDVGWLKSSQRITVDNFDHAFGAVEQG
VGYCRLPKHIVESRGSDKLTVLNVENGSGYHVPLHLTLPKGAKTGPAAKRFYELLLESASNVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=256, Percent_Identity=28.125, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789492, Length=268, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787949, Length=258, Percent_Identity=25.1937984496124, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33088; Mature: 33088

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKTTLDQWQTLYEIDRAGSIQAAALQLNKSHTTLIYALRKLEDQLGVTLVQVEGRRAV
CCCCCHHHHHHHHHHHHCCCCCEEHHEEECCCHHHHHHHHHHHHHHHCEEEEEECCCHHH
LSEDGKSLLRRASSMLEQARELELISEQLAKGVESEIVVAVDHLCCLERLYQPMAAFLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NNTTSIQVIETSLSKTTELVTQELADVAIINLPITNYSAEAFGFTMMEPVVASSHPLASA
CCCCEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHCHHHHHHHHHCCCCHHHH
VSVSLNQLSSLPQIVVRDLGAQTSQGSKKQGNKQDVGWLKSSQRITVDNFDHAFGAVEQG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHC
VGYCRLPKHIVESRGSDKLTVLNVENGSGYHVPLHLTLPKGAKTGPAAKRFYELLLESAS
CCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCC
NVS
CCC
>Mature Secondary Structure
MRLKTTLDQWQTLYEIDRAGSIQAAALQLNKSHTTLIYALRKLEDQLGVTLVQVEGRRAV
CCCCCHHHHHHHHHHHHCCCCCEEHHEEECCCHHHHHHHHHHHHHHHCEEEEEECCCHHH
LSEDGKSLLRRASSMLEQARELELISEQLAKGVESEIVVAVDHLCCLERLYQPMAAFLAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NNTTSIQVIETSLSKTTELVTQELADVAIINLPITNYSAEAFGFTMMEPVVASSHPLASA
CCCCEEEEEHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHCHHHHHHHHHCCCCHHHH
VSVSLNQLSSLPQIVVRDLGAQTSQGSKKQGNKQDVGWLKSSQRITVDNFDHAFGAVEQG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHC
VGYCRLPKHIVESRGSDKLTVLNVENGSGYHVPLHLTLPKGAKTGPAAKRFYELLLESAS
CCCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCC
NVS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]