| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710078
Identifier: 218710078
GI number: 218710078
Start: 2252305
End: 2252916
Strand: Direct
Name: 218710078
Synonym: VS_2099
Alternate gene names: NA
Gene position: 2252305-2252916 (Clockwise)
Preceding gene: 218710077
Following gene: 218710079
Centisome position: 68.27
GC content: 43.95
Gene sequence:
>612_bases ATGAACTTTATTAAAATCGTTTTCCAGAAAATCTGGGCCGTTGTGATGGTCTTGATTAAATTCTGCCTGTTTATGACAGT TATGTTTGCTGGAGCCTGGGCTCTTGCACCATTAGGCACAATCCATTCTAAAGACATCGACATGTCTCAATTCAACAATC ATCCCAATGAAATGATGATGAACTTCTTCCAGATGGAGTCCTTCTCTGGTTACTTGTTCTCAGTGACCATTGCTGTGGTT TTAGCCGGTGTTTACGGCATGTGGCAGTTACATGAACTGGGTGTGCATAAAGCAAAAGAGCACAAAAGCGCTCACGTTCA AATCGTGTTTGCACTGTCACTTTGCGGACTCTTCATCAGCAAAACATTCTGGGTTATCGCATTGGTTATCGCATTGGCGA ACTGGAAACATATTGGTCAATCATTGAGTGATGTCATTCGCCGTGGTGTTCAGCCTAAACAAGACGCGACCAATACAGAG ACAGCCGCAGTCCACGTATCACCTGAACAACCGGTAACAGAGCCGTCTTCAGTAGAGCAATCTTCAAAAGAACAGGCTTC AGAAGAAAAGACTCCAACAACACCATCCGCTACAGAAAAAGAGGTCGCATAA
Upstream 100 bases:
>100_bases ACCAATCTACCCACATAATAGACATCTACTTTTTAAGATGTCGTTAAAAGTTAGACTTCTAGGCTGCAAATTCTCTCTTC TTATTGATGTAGGTTGAGAT
Downstream 100 bases:
>100_bases TGAAAGAGATGATGATTCCATACATCCTAATTGTATGGTCACTGTTTGCGACAGGCGCACTTAAGAAGAACTTCAAGAAC TACACATGGGCTGCCATTGG
Product: Mg2+ and Co2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MNFIKIVFQKIWAVVMVLIKFCLFMTVMFAGAWALAPLGTIHSKDIDMSQFNNHPNEMMMNFFQMESFSGYLFSVTIAVV LAGVYGMWQLHELGVHKAKEHKSAHVQIVFALSLCGLFISKTFWVIALVIALANWKHIGQSLSDVIRRGVQPKQDATNTE TAAVHVSPEQPVTEPSSVEQSSKEQASEEKTPTTPSATEKEVA
Sequences:
>Translated_203_residues MNFIKIVFQKIWAVVMVLIKFCLFMTVMFAGAWALAPLGTIHSKDIDMSQFNNHPNEMMMNFFQMESFSGYLFSVTIAVV LAGVYGMWQLHELGVHKAKEHKSAHVQIVFALSLCGLFISKTFWVIALVIALANWKHIGQSLSDVIRRGVQPKQDATNTE TAAVHVSPEQPVTEPSSVEQSSKEQASEEKTPTTPSATEKEVA >Mature_203_residues MNFIKIVFQKIWAVVMVLIKFCLFMTVMFAGAWALAPLGTIHSKDIDMSQFNNHPNEMMMNFFQMESFSGYLFSVTIAVV LAGVYGMWQLHELGVHKAKEHKSAHVQIVFALSLCGLFISKTFWVIALVIALANWKHIGQSLSDVIRRGVQPKQDATNTE TAAVHVSPEQPVTEPSSVEQSSKEQASEEKTPTTPSATEKEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22602; Mature: 22602
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIKIVFQKIWAVVMVLIKFCLFMTVMFAGAWALAPLGTIHSKDIDMSQFNNHPNEMMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHH NFFQMESFSGYLFSVTIAVVLAGVYGMWQLHELGVHKAKEHKSAHVQIVFALSLCGLFIS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KTFWVIALVIALANWKHIGQSLSDVIRRGVQPKQDATNTETAAVHVSPEQPVTEPSSVEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH SSKEQASEEKTPTTPSATEKEVA HHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNFIKIVFQKIWAVVMVLIKFCLFMTVMFAGAWALAPLGTIHSKDIDMSQFNNHPNEMMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHH NFFQMESFSGYLFSVTIAVVLAGVYGMWQLHELGVHKAKEHKSAHVQIVFALSLCGLFIS HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KTFWVIALVIALANWKHIGQSLSDVIRRGVQPKQDATNTETAAVHVSPEQPVTEPSSVEQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH SSKEQASEEKTPTTPSATEKEVA HHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA