Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yiaV [C]

Identifier: 218710079

GI number: 218710079

Start: 2252916

End: 2253905

Strand: Direct

Name: yiaV [C]

Synonym: VS_2100

Alternate gene names: 218710079

Gene position: 2252916-2253905 (Clockwise)

Preceding gene: 218710078

Following gene: 218710080

Centisome position: 68.28

GC content: 45.76

Gene sequence:

>990_bases
ATGAAAGAGATGATGATTCCATACATCCTAATTGTATGGTCACTGTTTGCGACAGGCGCACTTAAGAAGAACTTCAAGAA
CTACACATGGGCTGCCATTGGTGGCGTAACGATTCTTGCGGTATTAGCGGTAATCTCTCGCTTGTGGGCACCCGTTGATT
TAACCAACTCAACCACAGTGAAAGCACCACACGCGGTGATGTCACCTATCTTTGGCCAGCAGATCGACCAAGTGCTTGTT
GAGCACAACCAAATGGTTAAAGAAGGCGACGTAATTTACACACTCGTCGACATTGACTCAGCCGCAGACAAAGCAAAGAT
CGAATCTTCAATTGTTCAGAAAGAAGAAGAGATCAAGCAAATGAATCGCGACTTAGAGCGTGCTGAAACGTCACCTGAAA
TTTTCAATATGCGTGACGTAGAAAAGTACGACTCTGATCTTCGAGTGCTGCATGCTGAACTGGTGTCGTTAAAAGCCGAC
CTACAAAAAGTAAATTGGGCGCAAGAGAAGAAAACCATTAGAGCTGAATTTGATGGTCAGGTATCGATAGTGAATATTGC
TGAAGGTTCTGTCATGGGTAACATGCACCTCTACAACACCAGCAAAAAGTTTCTTGAGATGCGTATTTCAGACCAAACTT
ATGGCTATGTTCAAGTAGGGGACTTCGCTGAGTTCTTCGTTGATGCATACCCAGGCCACGTGTTCCGAGCAAAAGTACAC
AGCTTTAATGCCGGTACTGGTGAGTCGAGTATTTCTCCACTTCAGGGGCCACAAAGCGTCGGTCAACACGTGGTAAGAAA
CGGCAATGGTTTAGGTCGTACTATCGTACTTGAGATCATTGAACCAGAAGGTTACAACATCCCTATTGGTTCAACTGGCG
CGGCTTGGATCTCGGCAGAGAAACCACATCCGTTCTGGGGCTTCATTGATGTAATCGGCGCAGCAACGGTTCGCCTACAA
TCTTACAAGTCATACCTAGGTGCTTGGTAA

Upstream 100 bases:

>100_bases
CGGTAACAGAGCCGTCTTCAGTAGAGCAATCTTCAAAAGAACAGGCTTCAGAAGAAAAGACTCCAACAACACCATCCGCT
ACAGAAAAAGAGGTCGCATA

Downstream 100 bases:

>100_bases
GCGCTTAAGCTCTTGGTAAACGATTAAGCATTCAATGATGTGACTGTTATTCACTCGTATAACAGCCACTCATGAACTAG
CGACTAATTGTAAAACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion Protein HlyD Family Protein; HlyD Family Secretion Protein; Multidrug Resistance Protein A

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV
EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD
LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH
SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ
SYKSYLGAW

Sequences:

>Translated_329_residues
MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV
EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD
LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH
SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ
SYKSYLGAW
>Mature_329_residues
MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTVKAPHAVMSPIFGQQIDQVLV
EHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQMNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKAD
LQKVNWAQEKKTIRAEFDGQVSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH
SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAEKPHPFWGFIDVIGAATVRLQ
SYKSYLGAW

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36584; Mature: 36584

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KAPHAVMSPIFGQQIDQVLVEHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
MNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKADLQKVNWAQEKKTIRAEFDGQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
VSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH
EEEEEEECCCEECCEEEECCHHHHHEEEECCCCCCEEEECHHHHHHHHCCCCCEEEEEEH
SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC
KPHPFWGFIDVIGAATVRLQSYKSYLGAW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEMMIPYILIVWSLFATGALKKNFKNYTWAAIGGVTILAVLAVISRLWAPVDLTNSTTV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KAPHAVMSPIFGQQIDQVLVEHNQMVKEGDVIYTLVDIDSAADKAKIESSIVQKEEEIKQ
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
MNRDLERAETSPEIFNMRDVEKYDSDLRVLHAELVSLKADLQKVNWAQEKKTIRAEFDGQ
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
VSIVNIAEGSVMGNMHLYNTSKKFLEMRISDQTYGYVQVGDFAEFFVDAYPGHVFRAKVH
EEEEEEECCCEECCEEEECCHHHHHEEEECCCCCCEEEECHHHHHHHHCCCCCEEEEEEH
SFNAGTGESSISPLQGPQSVGQHVVRNGNGLGRTIVLEIIEPEGYNIPIGSTGAAWISAE
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC
KPHPFWGFIDVIGAATVRLQSYKSYLGAW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA